Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.43□□□□□ -2.02
PTP4A1Q93096 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.43□□□□□ -2.02
PTP4A1Q93096 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.43□□□□□ -2.02
PTP4A1Q93096 RNA5SP269-201ENST00000459032 137 ntBASIC2.43□□□□□ -2.02
PTP4A1Q93096 snoU109.2-201ENST00000459316 135 ntBASIC2.43□□□□□ -2.02
PTP4A1Q93096 KLF3P2-201ENST00000465138 268 ntBASIC2.43□□□□□ -2.02
PTP4A1Q93096 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.43□□□□□ -2.02
PTP4A1Q93096 RPS29P26-201ENST00000477483 171 ntBASIC2.43□□□□□ -2.02
PTP4A1Q93096 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.43□□□□□ -2.02
PTP4A1Q93096 SCARNA24.1-201ENST00000516465 137 ntBASIC2.43□□□□□ -2.02
PTP4A1Q93096 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.43□□□□□ -2.02
PTP4A1Q93096 CBX3P7-201ENST00000532876 502 ntBASIC2.43□□□□□ -2.02
PTP4A1Q93096 MIR3126-201ENST00000577443 74 ntBASIC2.43□□□□□ -2.02
PTP4A1Q93096 AC098848.2-201ENST00000588023 330 ntBASIC2.43□□□□□ -2.02
PTP4A1Q93096 AC078899.2-201ENST00000595282 212 ntBASIC2.43□□□□□ -2.02
PTP4A1Q93096 AC093788.1-201ENST00000609356 927 ntBASIC2.43□□□□□ -2.02
PTP4A1Q93096 AC135507.2-201ENST00000612443 309 ntBASIC2.43□□□□□ -2.02
PTP4A1Q93096 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.43□□□□□ -2.02
PTP4A1Q93096 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.43□□□□□ -2.02
PTP4A1Q93096 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
PTP4A1Q93096 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
PTP4A1Q93096 FGF7P2-201ENST00000332473 296 ntBASIC2.42□□□□□ -2.02
PTP4A1Q93096 MIR483-201ENST00000385070 76 ntBASIC2.42□□□□□ -2.02
PTP4A1Q93096 AC107081.1-201ENST00000414975 361 ntBASIC2.42□□□□□ -2.02
PTP4A1Q93096 NUP35P1-201ENST00000422734 947 ntBASIC2.42□□□□□ -2.02
PTP4A1Q93096 AL139132.1-201ENST00000431587 344 ntBASIC2.42□□□□□ -2.02
PTP4A1Q93096 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.42□□□□□ -2.02
PTP4A1Q93096 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.42□□□□□ -2.02
PTP4A1Q93096 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.42□□□□□ -2.02
PTP4A1Q93096 IFNA11P-201ENST00000446352 526 ntBASIC2.42□□□□□ -2.02
PTP4A1Q93096 AC090515.1-201ENST00000465295 476 ntBASIC2.42□□□□□ -2.02
PTP4A1Q93096 RAP1BP2-201ENST00000478270 544 ntBASIC2.42□□□□□ -2.02
PTP4A1Q93096 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
PTP4A1Q93096 RBBP4P6-201ENST00000508098 202 ntBASIC2.42□□□□□ -2.02
PTP4A1Q93096 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.42□□□□□ -2.02
PTP4A1Q93096 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.42□□□□□ -2.02
PTP4A1Q93096 MTCYBP20-201ENST00000524239 1129 ntBASIC2.42□□□□□ -2.02
PTP4A1Q93096 AP001646.1-201ENST00000527936 915 ntBASIC2.42□□□□□ -2.02
PTP4A1Q93096 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.42□□□□□ -2.02
PTP4A1Q93096 AP002453.2-201ENST00000533503 320 ntBASIC2.42□□□□□ -2.02
PTP4A1Q93096 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.42□□□□□ -2.02
PTP4A1Q93096 AC025678.1-201ENST00000567861 338 ntBASIC2.42□□□□□ -2.02
PTP4A1Q93096 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.42□□□□□ -2.02
PTP4A1Q93096 MIR3200-201ENST00000580767 85 ntBASIC2.42□□□□□ -2.02
PTP4A1Q93096 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.42□□□□□ -2.02
PTP4A1Q93096 AC060766.3-201ENST00000591442 263 ntBASIC2.42□□□□□ -2.02
PTP4A1Q93096 AC245014.2-201ENST00000603689 287 ntBASIC2.42□□□□□ -2.02
PTP4A1Q93096 AC246785.4-201ENST00000605374 287 ntBASIC2.42□□□□□ -2.02
PTP4A1Q93096 AC010378.1-201ENST00000619270 362 ntBASIC2.42□□□□□ -2.02
PTP4A1Q93096 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
PTP4A1Q93096 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.42□□□□□ -2.02
PTP4A1Q93096 SNORD3E-201ENST00000362899 217 ntBASIC2.41□□□□□ -2.02
PTP4A1Q93096 RNU6-1097P-201ENST00000363586 107 ntBASIC2.41□□□□□ -2.02
PTP4A1Q93096 SNORA3A-201ENST00000364113 130 ntBASIC2.41□□□□□ -2.02
PTP4A1Q93096 RNA5SP181-201ENST00000410246 98 ntBASIC2.41□□□□□ -2.02
PTP4A1Q93096 AF274854.1-201ENST00000413236 615 ntBASIC2.41□□□□□ -2.02
PTP4A1Q93096 C1DP2-201ENST00000418167 426 ntBASIC2.41□□□□□ -2.02
PTP4A1Q93096 ISCA1P6-201ENST00000427740 390 ntBASIC2.41□□□□□ -2.02
PTP4A1Q93096 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.41□□□□□ -2.02
PTP4A1Q93096 MTATP6P16-201ENST00000434543 526 ntBASIC2.41□□□□□ -2.02
PTP4A1Q93096 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.41□□□□□ -2.02
PTP4A1Q93096 AC104058.1-201ENST00000448028 297 ntBASIC2.41□□□□□ -2.02
PTP4A1Q93096 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.41□□□□□ -2.02
PTP4A1Q93096 SNRPGP9-201ENST00000456025 225 ntBASIC2.41□□□□□ -2.02
PTP4A1Q93096 SNORD42A-201ENST00000459584 64 ntBASIC2.41□□□□□ -2.02
PTP4A1Q93096 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.41□□□□□ -2.02
PTP4A1Q93096 RNA5SP82-201ENST00000516707 92 ntBASIC2.41□□□□□ -2.02
PTP4A1Q93096 SNORA48.11-201ENST00000517015 89 ntBASIC2.41□□□□□ -2.02
PTP4A1Q93096 RNU6-685P-201ENST00000517088 95 ntBASIC2.41□□□□□ -2.02
PTP4A1Q93096 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.41□□□□□ -2.02
PTP4A1Q93096 CYCSP26-201ENST00000534107 320 ntBASIC2.41□□□□□ -2.02
PTP4A1Q93096 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
PTP4A1Q93096 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.41□□□□□ -2.02
PTP4A1Q93096 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.41□□□□□ -2.02
PTP4A1Q93096 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.41□□□□□ -2.02
PTP4A1Q93096 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.41□□□□□ -2.02
PTP4A1Q93096 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.41□□□□□ -2.02
PTP4A1Q93096 AC005000.2-201ENST00000605468 310 ntBASIC2.41□□□□□ -2.02
PTP4A1Q93096 Z99289.3-201ENST00000605586 594 ntBASIC2.41□□□□□ -2.02
PTP4A1Q93096 uc_338.15-201ENST00000615470 191 ntBASIC2.41□□□□□ -2.02
PTP4A1Q93096 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.41□□□□□ -2.02
PTP4A1Q93096 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.41□□□□□ -2.02
PTP4A1Q93096 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.41□□□□□ -2.02
PTP4A1Q93096 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
PTP4A1Q93096 RNU1-112P-201ENST00000364401 164 ntBASIC2.4□□□□□ -2.03
PTP4A1Q93096 SNORA6-201ENST00000384033 151 ntBASIC2.4□□□□□ -2.03
PTP4A1Q93096 SNORA18.3-201ENST00000384122 132 ntBASIC2.4□□□□□ -2.03
PTP4A1Q93096 RNU1-148P-201ENST00000384472 162 ntBASIC2.4□□□□□ -2.03
PTP4A1Q93096 SNORA80E-201ENST00000384744 137 ntBASIC2.4□□□□□ -2.03
PTP4A1Q93096 MIR578-201ENST00000384828 96 ntBASIC2.4□□□□□ -2.03
PTP4A1Q93096 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.4□□□□□ -2.03
PTP4A1Q93096 AL592148.1-201ENST00000413568 445 ntBASIC2.4□□□□□ -2.03
PTP4A1Q93096 RPL21P90-201ENST00000415692 466 ntBASIC2.4□□□□□ -2.03
PTP4A1Q93096 AC087499.2-201ENST00000432861 149 ntBASIC2.4□□□□□ -2.03
PTP4A1Q93096 AC009961.2-201ENST00000435771 251 ntBASIC2.4□□□□□ -2.03
PTP4A1Q93096 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.4□□□□□ -2.03
PTP4A1Q93096 AC022364.2-201ENST00000457963 554 ntBASIC2.4□□□□□ -2.03
PTP4A1Q93096 AC068781.1-201ENST00000488231 618 ntBASIC2.4□□□□□ -2.03
PTP4A1Q93096 RPS27P27-201ENST00000498779 255 ntBASIC2.4□□□□□ -2.03
PTP4A1Q93096 AC104806.1-201ENST00000508720 308 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms