Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 AC022202.1-201ENST00000613515 211 ntBASIC1.97□□□□□ -2.09
CCDC148Q8NFR7 AC091834.1-201ENST00000614543 472 ntBASIC1.97□□□□□ -2.09
CCDC148Q8NFR7 AC008121.3-201ENST00000618726 433 ntBASIC1.97□□□□□ -2.09
CCDC148Q8NFR7 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.97□□□□□ -2.09
CCDC148Q8NFR7 AL138960.2-201ENST00000625145 535 ntBASIC1.97□□□□□ -2.09
CCDC148Q8NFR7 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.96□□□□□ -2.1
CCDC148Q8NFR7 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.96□□□□□ -2.1
CCDC148Q8NFR7 RNU6-701P-201ENST00000384059 107 ntBASIC1.96□□□□□ -2.1
CCDC148Q8NFR7 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.96□□□□□ -2.1
CCDC148Q8NFR7 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.96□□□□□ -2.1
CCDC148Q8NFR7 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC1.96□□□□□ -2.1
CCDC148Q8NFR7 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.96□□□□□ -2.1
CCDC148Q8NFR7 AC112771.1-201ENST00000463581 102 ntBASIC1.96□□□□□ -2.1
CCDC148Q8NFR7 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.96□□□□□ -2.1
CCDC148Q8NFR7 FAM92A1P2-202ENST00000504766 877 ntBASIC1.96□□□□□ -2.1
CCDC148Q8NFR7 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CCDC148Q8NFR7 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.96□□□□□ -2.1
CCDC148Q8NFR7 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
CCDC148Q8NFR7 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.96□□□□□ -2.1
CCDC148Q8NFR7 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.96□□□□□ -2.1
CCDC148Q8NFR7 AC104581.2-201ENST00000572227 430 ntBASIC1.96□□□□□ -2.1
CCDC148Q8NFR7 AC090897.2-201ENST00000581715 130 ntBASIC1.96□□□□□ -2.1
CCDC148Q8NFR7 AL391001.1-201ENST00000602747 715 ntBASIC1.96□□□□□ -2.1
CCDC148Q8NFR7 AL670379.6-201ENST00000603753 252 ntBASIC1.96□□□□□ -2.1
CCDC148Q8NFR7 AL670379.11-201ENST00000604059 253 ntBASIC1.96□□□□□ -2.1
CCDC148Q8NFR7 AC008162.1-201ENST00000604718 254 ntBASIC1.96□□□□□ -2.1
CCDC148Q8NFR7 AL670379.1-201ENST00000604752 252 ntBASIC1.96□□□□□ -2.1
CCDC148Q8NFR7 AL670379.5-201ENST00000605253 252 ntBASIC1.96□□□□□ -2.1
CCDC148Q8NFR7 AL670379.12-201ENST00000605291 253 ntBASIC1.96□□□□□ -2.1
CCDC148Q8NFR7 AL670379.8-201ENST00000605353 252 ntBASIC1.96□□□□□ -2.1
CCDC148Q8NFR7 AL670379.7-201ENST00000605823 252 ntBASIC1.96□□□□□ -2.1
CCDC148Q8NFR7 AC087045.1-201ENST00000605856 382 ntBASIC1.96□□□□□ -2.1
CCDC148Q8NFR7 AC018645.2-201ENST00000609151 472 ntBASIC1.96□□□□□ -2.1
CCDC148Q8NFR7 AC091965.5-201ENST00000624785 342 ntBASIC1.96□□□□□ -2.1
CCDC148Q8NFR7 AC017037.3-201ENST00000625016 472 ntBASIC1.96□□□□□ -2.1
CCDC148Q8NFR7 AC004808.1-201ENST00000627671 721 ntBASIC1.96□□□□□ -2.1
CCDC148Q8NFR7 AC241585.2-209ENST00000638217 143 ntBASIC1.96□□□□□ -2.1
CCDC148Q8NFR7 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
CCDC148Q8NFR7 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
CCDC148Q8NFR7 SNORA25B-201ENST00000365507 128 ntBASIC1.95□□□□□ -2.1
CCDC148Q8NFR7 RNU6-723P-201ENST00000383973 107 ntBASIC1.95□□□□□ -2.1
CCDC148Q8NFR7 RNU6-769P-201ENST00000384407 104 ntBASIC1.95□□□□□ -2.1
CCDC148Q8NFR7 MIR518A2-201ENST00000384966 87 ntBASIC1.95□□□□□ -2.1
CCDC148Q8NFR7 MIR518D-201ENST00000385014 87 ntBASIC1.95□□□□□ -2.1
CCDC148Q8NFR7 MIR504-201ENST00000385065 83 ntBASIC1.95□□□□□ -2.1
CCDC148Q8NFR7 RPS12P24-201ENST00000412619 387 ntBASIC1.95□□□□□ -2.1
CCDC148Q8NFR7 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.95□□□□□ -2.1
CCDC148Q8NFR7 RAC1P6-201ENST00000423911 575 ntBASIC1.95□□□□□ -2.1
CCDC148Q8NFR7 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.95□□□□□ -2.1
CCDC148Q8NFR7 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.95□□□□□ -2.1
CCDC148Q8NFR7 LARP1BP3-201ENST00000437229 869 ntBASIC1.95□□□□□ -2.1
CCDC148Q8NFR7 AL117351.1-201ENST00000438864 766 ntBASIC1.95□□□□□ -2.1
CCDC148Q8NFR7 MTND4P25-201ENST00000441039 533 ntBASIC1.95□□□□□ -2.1
CCDC148Q8NFR7 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.95□□□□□ -2.1
CCDC148Q8NFR7 ZNF736P4Y-201ENST00000454995 1243 ntBASIC1.95□□□□□ -2.1
CCDC148Q8NFR7 BTF3P15-201ENST00000455606 336 ntBASIC1.95□□□□□ -2.1
CCDC148Q8NFR7 RPL7P43-201ENST00000478876 753 ntBASIC1.95□□□□□ -2.1
CCDC148Q8NFR7 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.95□□□□□ -2.1
CCDC148Q8NFR7 AC140059.1-201ENST00000489238 361 ntBASIC1.95□□□□□ -2.1
CCDC148Q8NFR7 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.95□□□□□ -2.1
CCDC148Q8NFR7 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.95□□□□□ -2.1
CCDC148Q8NFR7 AC020699.1-201ENST00000505161 445 ntBASIC1.95□□□□□ -2.1
CCDC148Q8NFR7 RNU6-572P-201ENST00000516724 80 ntBASIC1.95□□□□□ -2.1
CCDC148Q8NFR7 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.95□□□□□ -2.1
CCDC148Q8NFR7 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.95□□□□□ -2.1
CCDC148Q8NFR7 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.95□□□□□ -2.1
CCDC148Q8NFR7 AL713866.2-201ENST00000603579 219 ntBASIC1.95□□□□□ -2.1
CCDC148Q8NFR7 MTND3P19-201ENST00000603825 345 ntBASIC1.95□□□□□ -2.1
CCDC148Q8NFR7 BCRP9-201ENST00000605312 388 ntBASIC1.95□□□□□ -2.1
CCDC148Q8NFR7 MIR502-201ENST00000606349 86 ntBASIC1.95□□□□□ -2.1
CCDC148Q8NFR7 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.95□□□□□ -2.1
CCDC148Q8NFR7 SNORA4.1-201ENST00000364263 144 ntBASIC1.94□□□□□ -2.1
CCDC148Q8NFR7 SNORD48-201ENST00000364953 64 ntBASIC1.94□□□□□ -2.1
CCDC148Q8NFR7 AL627390.1-201ENST00000396055 340 ntBASIC1.94□□□□□ -2.1
CCDC148Q8NFR7 RNU4-22P-201ENST00000411058 166 ntBASIC1.94□□□□□ -2.1
CCDC148Q8NFR7 SNORD56-201ENST00000413522 71 ntBASIC1.94□□□□□ -2.1
CCDC148Q8NFR7 VPS26BP1-201ENST00000417155 755 ntBASIC1.94□□□□□ -2.1
CCDC148Q8NFR7 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.94□□□□□ -2.1
CCDC148Q8NFR7 TOMM20P4-201ENST00000427861 435 ntBASIC1.94□□□□□ -2.1
CCDC148Q8NFR7 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.94□□□□□ -2.1
CCDC148Q8NFR7 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.94□□□□□ -2.1
CCDC148Q8NFR7 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.94□□□□□ -2.1
CCDC148Q8NFR7 AC003071.1-201ENST00000451219 789 ntBASIC1.94□□□□□ -2.1
CCDC148Q8NFR7 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC148Q8NFR7 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC148Q8NFR7 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CCDC148Q8NFR7 SNORA25.15-201ENST00000516487 89 ntBASIC1.94□□□□□ -2.1
CCDC148Q8NFR7 RNU6-678P-201ENST00000516832 109 ntBASIC1.94□□□□□ -2.1
CCDC148Q8NFR7 AC034114.1-201ENST00000520293 285 ntBASIC1.94□□□□□ -2.1
CCDC148Q8NFR7 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC148Q8NFR7 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC148Q8NFR7 AC023813.2-201ENST00000564321 469 ntBASIC1.94□□□□□ -2.1
CCDC148Q8NFR7 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC148Q8NFR7 AC007363.1-201ENST00000604736 620 ntBASIC1.94□□□□□ -2.1
CCDC148Q8NFR7 AC096772.1-201ENST00000609146 564 ntBASIC1.94□□□□□ -2.1
CCDC148Q8NFR7 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.94□□□□□ -2.1
CCDC148Q8NFR7 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.94□□□□□ -2.1
CCDC148Q8NFR7 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.94□□□□□ -2.1
CCDC148Q8NFR7 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CCDC148Q8NFR7 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms