Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.52□□□□□ -2.17
CCDC112Q8NEF3 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC1.52□□□□□ -2.17
CCDC112Q8NEF3 ISCA1P1-201ENST00000426679 387 ntBASIC1.52□□□□□ -2.17
CCDC112Q8NEF3 Z82205.1-201ENST00000428456 297 ntBASIC1.52□□□□□ -2.17
CCDC112Q8NEF3 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CCDC112Q8NEF3 AC244035.1-201ENST00000430042 390 ntBASIC1.52□□□□□ -2.17
CCDC112Q8NEF3 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.52□□□□□ -2.17
CCDC112Q8NEF3 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.52□□□□□ -2.17
CCDC112Q8NEF3 AL161788.1-201ENST00000441805 169 ntBASIC1.52□□□□□ -2.17
CCDC112Q8NEF3 SNRPFP4-201ENST00000456366 242 ntBASIC1.52□□□□□ -2.17
CCDC112Q8NEF3 RNU6-390P-201ENST00000516259 103 ntBASIC1.52□□□□□ -2.17
CCDC112Q8NEF3 RNU1-92P-201ENST00000517017 135 ntBASIC1.52□□□□□ -2.17
CCDC112Q8NEF3 AC034114.1-201ENST00000520293 285 ntBASIC1.52□□□□□ -2.17
CCDC112Q8NEF3 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.52□□□□□ -2.17
CCDC112Q8NEF3 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.52□□□□□ -2.17
CCDC112Q8NEF3 AL121821.2-201ENST00000556081 394 ntBASIC1.52□□□□□ -2.17
CCDC112Q8NEF3 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.52□□□□□ -2.17
CCDC112Q8NEF3 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.52□□□□□ -2.17
CCDC112Q8NEF3 AC024060.1-201ENST00000607052 494 ntBASIC1.52□□□□□ -2.17
CCDC112Q8NEF3 AC011939.3-201ENST00000613686 466 ntBASIC1.52□□□□□ -2.17
CCDC112Q8NEF3 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.52□□□□□ -2.17
CCDC112Q8NEF3 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC1.52□□□□□ -2.17
CCDC112Q8NEF3 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.52□□□□□ -2.17
CCDC112Q8NEF3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.52□□□□□ -2.17
CCDC112Q8NEF3 AC092192.1-201ENST00000633154 1018 ntBASIC1.52□□□□□ -2.17
CCDC112Q8NEF3 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CCDC112Q8NEF3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.52□□□□□ -2.17
CCDC112Q8NEF3 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.51□□□□□ -2.17
CCDC112Q8NEF3 AL391987.6-201ENST00000305671 199 ntBASIC1.51□□□□□ -2.17
CCDC112Q8NEF3 RNU6-60P-201ENST00000364792 103 ntBASIC1.51□□□□□ -2.17
CCDC112Q8NEF3 RNU6-224P-201ENST00000384055 107 ntBASIC1.51□□□□□ -2.17
CCDC112Q8NEF3 MIR95-201ENST00000385072 81 ntBASIC1.51□□□□□ -2.17
CCDC112Q8NEF3 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
CCDC112Q8NEF3 AL591034.2-201ENST00000402839 359 ntBASIC1.51□□□□□ -2.17
CCDC112Q8NEF3 AL033519.2-201ENST00000403958 392 ntBASIC1.51□□□□□ -2.17
CCDC112Q8NEF3 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.51□□□□□ -2.17
CCDC112Q8NEF3 AL953862.1-201ENST00000423016 168 ntBASIC1.51□□□□□ -2.17
CCDC112Q8NEF3 PTGES3P4-201ENST00000426243 356 ntBASIC1.51□□□□□ -2.17
CCDC112Q8NEF3 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.51□□□□□ -2.17
CCDC112Q8NEF3 AC015922.2-201ENST00000435593 184 ntBASIC1.51□□□□□ -2.17
CCDC112Q8NEF3 AL121601.2-201ENST00000438019 707 ntBASIC1.51□□□□□ -2.17
CCDC112Q8NEF3 AP000949.1-201ENST00000438328 629 ntBASIC1.51□□□□□ -2.17
CCDC112Q8NEF3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.51□□□□□ -2.17
CCDC112Q8NEF3 RNU7-95P-201ENST00000459222 64 ntBASIC1.51□□□□□ -2.17
CCDC112Q8NEF3 AC005840.1-201ENST00000498412 377 ntBASIC1.51□□□□□ -2.17
CCDC112Q8NEF3 AC008837.2-201ENST00000513076 418 ntBASIC1.51□□□□□ -2.17
CCDC112Q8NEF3 RN7SKP258-201ENST00000517151 304 ntBASIC1.51□□□□□ -2.17
CCDC112Q8NEF3 MRPS36P5-201ENST00000551909 298 ntBASIC1.51□□□□□ -2.17
CCDC112Q8NEF3 AL136520.1-202ENST00000555494 763 ntBASIC1.51□□□□□ -2.17
CCDC112Q8NEF3 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.51□□□□□ -2.17
CCDC112Q8NEF3 AC008269.2-201ENST00000561915 1105 ntBASIC1.51□□□□□ -2.17
CCDC112Q8NEF3 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.51□□□□□ -2.17
CCDC112Q8NEF3 AL512347.1-201ENST00000566420 503 ntBASIC1.51□□□□□ -2.17
CCDC112Q8NEF3 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.51□□□□□ -2.17
CCDC112Q8NEF3 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.51□□□□□ -2.17
CCDC112Q8NEF3 DPPA3P3-201ENST00000603842 430 ntBASIC1.51□□□□□ -2.17
CCDC112Q8NEF3 AC016925.2-201ENST00000605108 242 ntBASIC1.51□□□□□ -2.17
CCDC112Q8NEF3 AF129408.1-201ENST00000608767 431 ntBASIC1.51□□□□□ -2.17
CCDC112Q8NEF3 AC006338.1-201ENST00000618453 749 ntBASIC1.51□□□□□ -2.17
CCDC112Q8NEF3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.51□□□□□ -2.17
CCDC112Q8NEF3 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.51□□□□□ -2.17
CCDC112Q8NEF3 NACAP2-201ENST00000318548 624 ntBASIC1.5□□□□□ -2.17
CCDC112Q8NEF3 RNU6-289P-201ENST00000364093 107 ntBASIC1.5□□□□□ -2.17
CCDC112Q8NEF3 Y_RNA.226-201ENST00000364337 114 ntBASIC1.5□□□□□ -2.17
CCDC112Q8NEF3 RNU1-57P-201ENST00000384491 166 ntBASIC1.5□□□□□ -2.17
CCDC112Q8NEF3 RNA5SP212-201ENST00000391223 107 ntBASIC1.5□□□□□ -2.17
CCDC112Q8NEF3 MIR934-201ENST00000401241 83 ntBASIC1.5□□□□□ -2.17
CCDC112Q8NEF3 AC097463.2-201ENST00000421074 142 ntBASIC1.5□□□□□ -2.17
CCDC112Q8NEF3 SNRPGP13-201ENST00000442212 177 ntBASIC1.5□□□□□ -2.17
CCDC112Q8NEF3 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.5□□□□□ -2.17
CCDC112Q8NEF3 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.5□□□□□ -2.17
CCDC112Q8NEF3 CYP2C59P-201ENST00000457790 269 ntBASIC1.5□□□□□ -2.17
CCDC112Q8NEF3 RPL22P13-201ENST00000493291 347 ntBASIC1.5□□□□□ -2.17
CCDC112Q8NEF3 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.5□□□□□ -2.17
CCDC112Q8NEF3 AC093752.1-206ENST00000511823 336 ntBASIC1.5□□□□□ -2.17
CCDC112Q8NEF3 AC024589.1-201ENST00000512207 263 ntBASIC1.5□□□□□ -2.17
CCDC112Q8NEF3 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.5□□□□□ -2.17
CCDC112Q8NEF3 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
CCDC112Q8NEF3 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.5□□□□□ -2.17
CCDC112Q8NEF3 VN1R83P-201ENST00000595685 445 ntBASIC1.5□□□□□ -2.17
CCDC112Q8NEF3 AC073544.2-201ENST00000601155 540 ntBASIC1.5□□□□□ -2.17
CCDC112Q8NEF3 AL355598.1-201ENST00000604169 202 ntBASIC1.5□□□□□ -2.17
CCDC112Q8NEF3 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.5□□□□□ -2.17
CCDC112Q8NEF3 AC018926.1-201ENST00000616335 435 ntBASIC1.5□□□□□ -2.17
CCDC112Q8NEF3 AP000943.4-201ENST00000622912 357 ntBASIC1.5□□□□□ -2.17
CCDC112Q8NEF3 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
CCDC112Q8NEF3 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CCDC112Q8NEF3 DDX43P2-201ENST00000604753 1354 ntBASIC1.49□□□□□ -2.17
CCDC112Q8NEF3 ZNF209P-201ENST00000593450 2304 ntBASIC1.49□□□□□ -2.17
CCDC112Q8NEF3 RNU6-777P-201ENST00000364265 104 ntBASIC1.49□□□□□ -2.17
CCDC112Q8NEF3 RNU6-658P-201ENST00000384606 106 ntBASIC1.49□□□□□ -2.17
CCDC112Q8NEF3 AC078974.1-201ENST00000411597 223 ntBASIC1.49□□□□□ -2.17
CCDC112Q8NEF3 AC004965.1-201ENST00000413033 213 ntBASIC1.49□□□□□ -2.17
CCDC112Q8NEF3 RPL21P24-201ENST00000413752 448 ntBASIC1.49□□□□□ -2.17
CCDC112Q8NEF3 RPS15AP12-201ENST00000419498 388 ntBASIC1.49□□□□□ -2.17
CCDC112Q8NEF3 SDAD1P3-201ENST00000427380 333 ntBASIC1.49□□□□□ -2.17
CCDC112Q8NEF3 GPM6BP2-201ENST00000432046 144 ntBASIC1.49□□□□□ -2.17
CCDC112Q8NEF3 GTF2IP3-201ENST00000433887 494 ntBASIC1.49□□□□□ -2.17
CCDC112Q8NEF3 USP9YP24-201ENST00000434374 697 ntBASIC1.49□□□□□ -2.17
CCDC112Q8NEF3 MTND2P29-201ENST00000438595 412 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms