Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 RNU6-874P-201ENST00000362390 105 ntBASIC4.4□□□□□ -1.71
LINC00116Q8NCU8 RNA5SP52-201ENST00000362448 134 ntBASIC4.4□□□□□ -1.71
LINC00116Q8NCU8 Y_RNA.257-201ENST00000364596 102 ntBASIC4.4□□□□□ -1.71
LINC00116Q8NCU8 MIR1252-201ENST00000408861 65 ntBASIC4.4□□□□□ -1.71
LINC00116Q8NCU8 RNA5SP306-201ENST00000411087 107 ntBASIC4.4□□□□□ -1.71
LINC00116Q8NCU8 AL030996.1-201ENST00000411430 235 ntBASIC4.4□□□□□ -1.71
LINC00116Q8NCU8 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.4□□□□□ -1.71
LINC00116Q8NCU8 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.4□□□□□ -1.71
LINC00116Q8NCU8 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.4□□□□□ -1.71
LINC00116Q8NCU8 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.4□□□□□ -1.71
LINC00116Q8NCU8 RPS24P13-201ENST00000442520 397 ntBASIC4.4□□□□□ -1.71
LINC00116Q8NCU8 AL583843.1-201ENST00000456070 346 ntBASIC4.4□□□□□ -1.71
LINC00116Q8NCU8 RPL27AP5-201ENST00000469428 449 ntBASIC4.4□□□□□ -1.71
LINC00116Q8NCU8 AC006445.1-201ENST00000491925 405 ntBASIC4.4□□□□□ -1.71
LINC00116Q8NCU8 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.4□□□□□ -1.71
LINC00116Q8NCU8 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC4.4□□□□□ -1.71
LINC00116Q8NCU8 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LINC00116Q8NCU8 AC016727.2-201ENST00000603988 621 ntBASIC4.4□□□□□ -1.71
LINC00116Q8NCU8 AL591516.1-201ENST00000611326 274 ntBASIC4.4□□□□□ -1.71
LINC00116Q8NCU8 MIR8062-201ENST00000621515 85 ntBASIC4.4□□□□□ -1.71
LINC00116Q8NCU8 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LINC00116Q8NCU8 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.4□□□□□ -1.71
LINC00116Q8NCU8 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LINC00116Q8NCU8 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
LINC00116Q8NCU8 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LINC00116Q8NCU8 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.39□□□□□ -1.71
LINC00116Q8NCU8 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LINC00116Q8NCU8 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
LINC00116Q8NCU8 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
LINC00116Q8NCU8 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.39□□□□□ -1.71
LINC00116Q8NCU8 RNU6-356P-201ENST00000384140 107 ntBASIC4.39□□□□□ -1.71
LINC00116Q8NCU8 Y_RNA.534-201ENST00000384599 112 ntBASIC4.39□□□□□ -1.71
LINC00116Q8NCU8 RNU6-1179P-201ENST00000384667 107 ntBASIC4.39□□□□□ -1.71
LINC00116Q8NCU8 RNU6-713P-201ENST00000384761 107 ntBASIC4.39□□□□□ -1.71
LINC00116Q8NCU8 RNU6-1156P-201ENST00000410365 100 ntBASIC4.39□□□□□ -1.71
LINC00116Q8NCU8 RNU6-174P-201ENST00000410406 106 ntBASIC4.39□□□□□ -1.71
LINC00116Q8NCU8 RNU6-607P-201ENST00000411283 108 ntBASIC4.39□□□□□ -1.71
LINC00116Q8NCU8 COTL1P1-201ENST00000422309 375 ntBASIC4.39□□□□□ -1.71
LINC00116Q8NCU8 RPL26P6-201ENST00000440913 438 ntBASIC4.39□□□□□ -1.71
LINC00116Q8NCU8 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.39□□□□□ -1.71
LINC00116Q8NCU8 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.39□□□□□ -1.71
LINC00116Q8NCU8 AC069499.1-201ENST00000489433 509 ntBASIC4.39□□□□□ -1.71
LINC00116Q8NCU8 AC022447.4-201ENST00000504053 364 ntBASIC4.39□□□□□ -1.71
LINC00116Q8NCU8 VN1R104P-201ENST00000505115 1009 ntBASIC4.39□□□□□ -1.71
LINC00116Q8NCU8 FCF1P8-201ENST00000510322 597 ntBASIC4.39□□□□□ -1.71
LINC00116Q8NCU8 RNU6-1143P-201ENST00000516125 104 ntBASIC4.39□□□□□ -1.71
LINC00116Q8NCU8 Y_RNA.715-201ENST00000517082 110 ntBASIC4.39□□□□□ -1.71
LINC00116Q8NCU8 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LINC00116Q8NCU8 AL121603.1-201ENST00000553815 142 ntBASIC4.39□□□□□ -1.71
LINC00116Q8NCU8 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.39□□□□□ -1.71
LINC00116Q8NCU8 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.39□□□□□ -1.71
LINC00116Q8NCU8 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.39□□□□□ -1.71
LINC00116Q8NCU8 MIR4458-201ENST00000578872 75 ntBASIC4.39□□□□□ -1.71
LINC00116Q8NCU8 LRRC37A5P-203ENST00000580181 585 ntBASIC4.39□□□□□ -1.71
LINC00116Q8NCU8 AL512643.1-201ENST00000635735 524 ntBASIC4.39□□□□□ -1.71
LINC00116Q8NCU8 MIR4272-201ENST00000635924 64 ntBASIC4.39□□□□□ -1.71
LINC00116Q8NCU8 AC005183.1-201ENST00000603687 1979 ntBASIC4.39□□□□□ -1.71
LINC00116Q8NCU8 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LINC00116Q8NCU8 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.39□□□□□ -1.71
LINC00116Q8NCU8 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LINC00116Q8NCU8 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LINC00116Q8NCU8 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
LINC00116Q8NCU8 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LINC00116Q8NCU8 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.38□□□□□ -1.71
LINC00116Q8NCU8 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.38□□□□□ -1.71
LINC00116Q8NCU8 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
LINC00116Q8NCU8 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.38□□□□□ -1.71
LINC00116Q8NCU8 RNA5SP197-201ENST00000363357 119 ntBASIC4.38□□□□□ -1.71
LINC00116Q8NCU8 SNORA36C-201ENST00000384289 132 ntBASIC4.38□□□□□ -1.71
LINC00116Q8NCU8 Y_RNA.577-201ENST00000384794 101 ntBASIC4.38□□□□□ -1.71
LINC00116Q8NCU8 AL031121.1-201ENST00000406553 254 ntBASIC4.38□□□□□ -1.71
LINC00116Q8NCU8 RNA5SP146-201ENST00000410743 123 ntBASIC4.38□□□□□ -1.71
LINC00116Q8NCU8 AL356968.1-201ENST00000416622 474 ntBASIC4.38□□□□□ -1.71
LINC00116Q8NCU8 UBE2D3P2-201ENST00000424409 445 ntBASIC4.38□□□□□ -1.71
LINC00116Q8NCU8 AC006028.1-201ENST00000438379 402 ntBASIC4.38□□□□□ -1.71
LINC00116Q8NCU8 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.38□□□□□ -1.71
LINC00116Q8NCU8 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LINC00116Q8NCU8 CHEK2P4-201ENST00000450340 246 ntBASIC4.38□□□□□ -1.71
LINC00116Q8NCU8 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.38□□□□□ -1.71
LINC00116Q8NCU8 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.38□□□□□ -1.71
LINC00116Q8NCU8 ACA59.1-201ENST00000515966 143 ntBASIC4.38□□□□□ -1.71
LINC00116Q8NCU8 RN7SKP209-201ENST00000516888 304 ntBASIC4.38□□□□□ -1.71
LINC00116Q8NCU8 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.38□□□□□ -1.71
LINC00116Q8NCU8 CBX3P8-201ENST00000532412 525 ntBASIC4.38□□□□□ -1.71
LINC00116Q8NCU8 HMGB3P26-201ENST00000560051 582 ntBASIC4.38□□□□□ -1.71
LINC00116Q8NCU8 MIR5188-201ENST00000583467 113 ntBASIC4.38□□□□□ -1.71
LINC00116Q8NCU8 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.38□□□□□ -1.71
LINC00116Q8NCU8 AC034102.8-201ENST00000615146 484 ntBASIC4.38□□□□□ -1.71
LINC00116Q8NCU8 AL138825.1-201ENST00000618587 192 ntBASIC4.38□□□□□ -1.71
LINC00116Q8NCU8 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.38□□□□□ -1.71
LINC00116Q8NCU8 Z99571.1-201ENST00000636677 394 ntBASIC4.38□□□□□ -1.71
LINC00116Q8NCU8 AC008669.1-201ENST00000565823 2178 ntBASIC4.38□□□□□ -1.71
LINC00116Q8NCU8 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.38□□□□□ -1.71
LINC00116Q8NCU8 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
LINC00116Q8NCU8 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
LINC00116Q8NCU8 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
LINC00116Q8NCU8 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LINC00116Q8NCU8 MTND5P7-201ENST00000413558 1798 ntBASIC4.37□□□□□ -1.71
LINC00116Q8NCU8 AC027290.2-201ENST00000623210 18662 ntBASIC4.37□□□□□ -1.71
LINC00116Q8NCU8 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms