Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 RNU6-1281P-201ENST00000516223 105 ntBASIC3.31□□□□□ -1.88
USP38Q8NB14 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
USP38Q8NB14 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.31□□□□□ -1.88
USP38Q8NB14 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.31□□□□□ -1.88
USP38Q8NB14 AP003033.1-201ENST00000527244 415 ntBASIC3.31□□□□□ -1.88
USP38Q8NB14 AK6P1-201ENST00000540219 478 ntBASIC3.31□□□□□ -1.88
USP38Q8NB14 ZNF519P2-201ENST00000557032 169 ntBASIC3.31□□□□□ -1.88
USP38Q8NB14 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.31□□□□□ -1.88
USP38Q8NB14 AC136619.2-201ENST00000563361 631 ntBASIC3.31□□□□□ -1.88
USP38Q8NB14 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.31□□□□□ -1.88
USP38Q8NB14 TPRKBP2-201ENST00000565969 475 ntBASIC3.31□□□□□ -1.88
USP38Q8NB14 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.31□□□□□ -1.88
USP38Q8NB14 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.31□□□□□ -1.88
USP38Q8NB14 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.31□□□□□ -1.88
USP38Q8NB14 AC078899.3-201ENST00000599065 212 ntBASIC3.31□□□□□ -1.88
USP38Q8NB14 AC025165.5-201ENST00000602802 578 ntBASIC3.31□□□□□ -1.88
USP38Q8NB14 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.31□□□□□ -1.88
USP38Q8NB14 AC096644.4-201ENST00000563417 2912 ntBASIC3.31□□□□□ -1.88
USP38Q8NB14 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
USP38Q8NB14 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
USP38Q8NB14 HSPA8P4-201ENST00000511877 1920 ntBASIC3.31□□□□□ -1.88
USP38Q8NB14 AC006020.1-201ENST00000420179 1854 ntBASIC3.3□□□□□ -1.88
USP38Q8NB14 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
USP38Q8NB14 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
USP38Q8NB14 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.3□□□□□ -1.88
USP38Q8NB14 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.3□□□□□ -1.88
USP38Q8NB14 MTND4P5-201ENST00000435821 1374 ntBASIC3.3□□□□□ -1.88
USP38Q8NB14 RNU6-552P-201ENST00000362869 119 ntBASIC3.3□□□□□ -1.88
USP38Q8NB14 RNU6-1090P-201ENST00000364065 94 ntBASIC3.3□□□□□ -1.88
USP38Q8NB14 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.3□□□□□ -1.88
USP38Q8NB14 CD24P4-201ENST00000382840 243 ntBASIC3.3□□□□□ -1.88
USP38Q8NB14 SNORA69-201ENST00000383895 132 ntBASIC3.3□□□□□ -1.88
USP38Q8NB14 RNU2-29P-201ENST00000410423 189 ntBASIC3.3□□□□□ -1.88
USP38Q8NB14 RNU4-46P-201ENST00000410818 138 ntBASIC3.3□□□□□ -1.88
USP38Q8NB14 RPL21P90-201ENST00000415692 466 ntBASIC3.3□□□□□ -1.88
USP38Q8NB14 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
USP38Q8NB14 AL353729.1-201ENST00000425044 720 ntBASIC3.3□□□□□ -1.88
USP38Q8NB14 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.3□□□□□ -1.88
USP38Q8NB14 MTND1P4-201ENST00000435196 415 ntBASIC3.3□□□□□ -1.88
USP38Q8NB14 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.3□□□□□ -1.88
USP38Q8NB14 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.3□□□□□ -1.88
USP38Q8NB14 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.3□□□□□ -1.88
USP38Q8NB14 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.3□□□□□ -1.88
USP38Q8NB14 RPL37P4-201ENST00000448908 268 ntBASIC3.3□□□□□ -1.88
USP38Q8NB14 SNRPFP3-201ENST00000457792 225 ntBASIC3.3□□□□□ -1.88
USP38Q8NB14 GMFBP1-201ENST00000467831 427 ntBASIC3.3□□□□□ -1.88
USP38Q8NB14 AC128713.1-201ENST00000471495 306 ntBASIC3.3□□□□□ -1.88
USP38Q8NB14 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.3□□□□□ -1.88
USP38Q8NB14 ANXA2P1-201ENST00000505539 926 ntBASIC3.3□□□□□ -1.88
USP38Q8NB14 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.3□□□□□ -1.88
USP38Q8NB14 RNA5SP401-201ENST00000515920 127 ntBASIC3.3□□□□□ -1.88
USP38Q8NB14 RNU4-29P-201ENST00000515943 174 ntBASIC3.3□□□□□ -1.88
USP38Q8NB14 RNU6-1178P-201ENST00000516674 107 ntBASIC3.3□□□□□ -1.88
USP38Q8NB14 RNU6-572P-201ENST00000516724 80 ntBASIC3.3□□□□□ -1.88
USP38Q8NB14 RN7SKP219-201ENST00000516825 296 ntBASIC3.3□□□□□ -1.88
USP38Q8NB14 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.3□□□□□ -1.88
USP38Q8NB14 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.3□□□□□ -1.88
USP38Q8NB14 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.3□□□□□ -1.88
USP38Q8NB14 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.3□□□□□ -1.88
USP38Q8NB14 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.3□□□□□ -1.88
USP38Q8NB14 MIR548AC-201ENST00000585049 88 ntBASIC3.3□□□□□ -1.88
USP38Q8NB14 uc_338.11-201ENST00000619132 160 ntBASIC3.3□□□□□ -1.88
USP38Q8NB14 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
USP38Q8NB14 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
USP38Q8NB14 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
USP38Q8NB14 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
USP38Q8NB14 Y_RNA.9-201ENST00000362354 101 ntBASIC3.29□□□□□ -1.88
USP38Q8NB14 Y_RNA.255-201ENST00000364581 97 ntBASIC3.29□□□□□ -1.88
USP38Q8NB14 RNU6-395P-201ENST00000365662 106 ntBASIC3.29□□□□□ -1.88
USP38Q8NB14 RNU1-73P-201ENST00000383971 164 ntBASIC3.29□□□□□ -1.88
USP38Q8NB14 RNU6-1027P-201ENST00000383998 107 ntBASIC3.29□□□□□ -1.88
USP38Q8NB14 RNU6-1179P-201ENST00000384667 107 ntBASIC3.29□□□□□ -1.88
USP38Q8NB14 MIR764-201ENST00000390811 85 ntBASIC3.29□□□□□ -1.88
USP38Q8NB14 SNORD115-47-201ENST00000391226 86 ntBASIC3.29□□□□□ -1.88
USP38Q8NB14 AL356057.2-201ENST00000403318 432 ntBASIC3.29□□□□□ -1.88
USP38Q8NB14 RNU2-52P-201ENST00000410680 190 ntBASIC3.29□□□□□ -1.88
USP38Q8NB14 USP9YP27-201ENST00000418455 438 ntBASIC3.29□□□□□ -1.88
USP38Q8NB14 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.29□□□□□ -1.88
USP38Q8NB14 BX276092.3-201ENST00000424182 230 ntBASIC3.29□□□□□ -1.88
USP38Q8NB14 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.29□□□□□ -1.88
USP38Q8NB14 AC000111.3-201ENST00000433478 193 ntBASIC3.29□□□□□ -1.88
USP38Q8NB14 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.29□□□□□ -1.88
USP38Q8NB14 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.29□□□□□ -1.88
USP38Q8NB14 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.29□□□□□ -1.88
USP38Q8NB14 RPL21P41-201ENST00000459863 264 ntBASIC3.29□□□□□ -1.88
USP38Q8NB14 AC083798.1-201ENST00000472671 131 ntBASIC3.29□□□□□ -1.88
USP38Q8NB14 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.29□□□□□ -1.88
USP38Q8NB14 RPL36AP51-201ENST00000487216 318 ntBASIC3.29□□□□□ -1.88
USP38Q8NB14 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.29□□□□□ -1.88
USP38Q8NB14 RNU6-991P-201ENST00000516168 107 ntBASIC3.29□□□□□ -1.88
USP38Q8NB14 SNORA40.12-201ENST00000516329 111 ntBASIC3.29□□□□□ -1.88
USP38Q8NB14 SNORA31.19-201ENST00000517079 126 ntBASIC3.29□□□□□ -1.88
USP38Q8NB14 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.29□□□□□ -1.88
USP38Q8NB14 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.29□□□□□ -1.88
USP38Q8NB14 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.29□□□□□ -1.88
USP38Q8NB14 DNAJC8P1-201ENST00000554535 372 ntBASIC3.29□□□□□ -1.88
USP38Q8NB14 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.29□□□□□ -1.88
USP38Q8NB14 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.29□□□□□ -1.88
USP38Q8NB14 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.29□□□□□ -1.88
USP38Q8NB14 AL158827.2-201ENST00000602494 330 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms