Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC0.73□□□□□ -2.29
VPS8Q8N3P4 AC095038.3-201ENST00000634439 195 ntBASIC0.73□□□□□ -2.29
VPS8Q8N3P4 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.73□□□□□ -2.29
VPS8Q8N3P4 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC0.72□□□□□ -2.29
VPS8Q8N3P4 MTND2P24-201ENST00000453434 806 ntBASIC0.72□□□□□ -2.29
VPS8Q8N3P4 FCF1P6-201ENST00000456841 595 ntBASIC0.72□□□□□ -2.29
VPS8Q8N3P4 RNU6-229P-201ENST00000516614 102 ntBASIC0.72□□□□□ -2.29
VPS8Q8N3P4 SNORA31.22-201ENST00000517204 135 ntBASIC0.72□□□□□ -2.29
VPS8Q8N3P4 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.72□□□□□ -2.29
VPS8Q8N3P4 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.72□□□□□ -2.29
VPS8Q8N3P4 AC010900.2-201ENST00000604508 210 ntBASIC0.72□□□□□ -2.29
VPS8Q8N3P4 AC096772.1-201ENST00000609146 564 ntBASIC0.72□□□□□ -2.29
VPS8Q8N3P4 AC083865.1-201ENST00000636634 831 ntBASIC0.72□□□□□ -2.29
VPS8Q8N3P4 MIR330-201ENST00000362196 94 ntBASIC0.72□□□□□ -2.29
VPS8Q8N3P4 RNU6-884P-201ENST00000363889 107 ntBASIC0.72□□□□□ -2.29
VPS8Q8N3P4 Y_RNA.295-201ENST00000364918 102 ntBASIC0.72□□□□□ -2.29
VPS8Q8N3P4 MIR29C-201ENST00000385231 88 ntBASIC0.72□□□□□ -2.29
VPS8Q8N3P4 UBE2V2P3-201ENST00000433562 437 ntBASIC0.72□□□□□ -2.29
VPS8Q8N3P4 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC0.72□□□□□ -2.29
VPS8Q8N3P4 LARP1BP2-201ENST00000486594 519 ntBASIC0.72□□□□□ -2.29
VPS8Q8N3P4 RNU6-1256P-201ENST00000516539 103 ntBASIC0.72□□□□□ -2.29
VPS8Q8N3P4 RNA5SP330-201ENST00000517096 96 ntBASIC0.72□□□□□ -2.29
VPS8Q8N3P4 HSPA8P13-201ENST00000523715 472 ntBASIC0.72□□□□□ -2.29
VPS8Q8N3P4 AC093510.2-201ENST00000562820 896 ntBASIC0.72□□□□□ -2.29
VPS8Q8N3P4 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.72□□□□□ -2.29
VPS8Q8N3P4 MIR924-201ENST00000638017 53 ntBASIC0.72□□□□□ -2.29
VPS8Q8N3P4 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
VPS8Q8N3P4 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.71□□□□□ -2.3
VPS8Q8N3P4 HSBP1P2-201ENST00000299671 229 ntBASIC0.71□□□□□ -2.3
VPS8Q8N3P4 RNA5SP327-201ENST00000362494 101 ntBASIC0.71□□□□□ -2.3
VPS8Q8N3P4 Y_RNA.30-201ENST00000362572 97 ntBASIC0.71□□□□□ -2.3
VPS8Q8N3P4 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC0.71□□□□□ -2.3
VPS8Q8N3P4 ZNF863P-201ENST00000426746 417 ntBASIC0.71□□□□□ -2.3
VPS8Q8N3P4 PGBD4P5-201ENST00000445958 426 ntBASIC0.71□□□□□ -2.3
VPS8Q8N3P4 HSPE1P13-201ENST00000451143 297 ntBASIC0.71□□□□□ -2.3
VPS8Q8N3P4 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC0.71□□□□□ -2.3
VPS8Q8N3P4 RPL9P9-202ENST00000466501 579 ntBASIC0.71□□□□□ -2.3
VPS8Q8N3P4 AP003034.1-201ENST00000534621 422 ntBASIC0.71□□□□□ -2.3
VPS8Q8N3P4 RAB11AP2-201ENST00000545905 639 ntBASIC0.71□□□□□ -2.3
VPS8Q8N3P4 CYB5AP5-201ENST00000549779 389 ntBASIC0.71□□□□□ -2.3
VPS8Q8N3P4 MIR4653-201ENST00000585107 83 ntBASIC0.71□□□□□ -2.3
VPS8Q8N3P4 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.71□□□□□ -2.3
VPS8Q8N3P4 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.7□□□□□ -2.3
VPS8Q8N3P4 SNORA29-201ENST00000384183 140 ntBASIC0.7□□□□□ -2.3
VPS8Q8N3P4 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
VPS8Q8N3P4 MIR888-201ENST00000401186 77 ntBASIC0.7□□□□□ -2.3
VPS8Q8N3P4 MIR1283-2-201ENST00000408621 87 ntBASIC0.7□□□□□ -2.3
VPS8Q8N3P4 AC010385.1-201ENST00000412374 256 ntBASIC0.7□□□□□ -2.3
VPS8Q8N3P4 Z82210.1-201ENST00000440037 231 ntBASIC0.7□□□□□ -2.3
VPS8Q8N3P4 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.7□□□□□ -2.3
VPS8Q8N3P4 ACA64.5-201ENST00000516207 127 ntBASIC0.7□□□□□ -2.3
VPS8Q8N3P4 OR5AK1P-201ENST00000524837 922 ntBASIC0.7□□□□□ -2.3
VPS8Q8N3P4 AP003072.2-201ENST00000527756 676 ntBASIC0.7□□□□□ -2.3
VPS8Q8N3P4 DUXAP1-201ENST00000556632 463 ntBASIC0.7□□□□□ -2.3
VPS8Q8N3P4 AC006270.3-201ENST00000605967 1036 ntBASIC0.7□□□□□ -2.3
VPS8Q8N3P4 AC016252.1-201ENST00000609721 474 ntBASIC0.7□□□□□ -2.3
VPS8Q8N3P4 AL391516.1-201ENST00000554380 2449 ntBASIC0.69□□□□□ -2.3
VPS8Q8N3P4 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
VPS8Q8N3P4 Y_RNA.115-201ENST00000363272 98 ntBASIC0.69□□□□□ -2.3
VPS8Q8N3P4 RNU2-43P-201ENST00000410306 190 ntBASIC0.69□□□□□ -2.3
VPS8Q8N3P4 USP9YP33-201ENST00000412220 421 ntBASIC0.69□□□□□ -2.3
VPS8Q8N3P4 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.69□□□□□ -2.3
VPS8Q8N3P4 AC009518.2-201ENST00000418056 731 ntBASIC0.69□□□□□ -2.3
VPS8Q8N3P4 AC083875.1-201ENST00000419509 405 ntBASIC0.69□□□□□ -2.3
VPS8Q8N3P4 RPL26P6-201ENST00000440913 438 ntBASIC0.69□□□□□ -2.3
VPS8Q8N3P4 RPS26P55-201ENST00000471178 356 ntBASIC0.69□□□□□ -2.3
VPS8Q8N3P4 AC025459.1-201ENST00000504072 156 ntBASIC0.69□□□□□ -2.3
VPS8Q8N3P4 AC021146.8-201ENST00000507455 733 ntBASIC0.69□□□□□ -2.3
VPS8Q8N3P4 RNU6-322P-201ENST00000516010 103 ntBASIC0.69□□□□□ -2.3
VPS8Q8N3P4 SCARNA16.2-201ENST00000516520 172 ntBASIC0.69□□□□□ -2.3
VPS8Q8N3P4 AC125611.1-201ENST00000549563 229 ntBASIC0.69□□□□□ -2.3
VPS8Q8N3P4 MIR4661-201ENST00000582720 75 ntBASIC0.69□□□□□ -2.3
VPS8Q8N3P4 UBE2Q2P6-201ENST00000612666 153 ntBASIC0.69□□□□□ -2.3
VPS8Q8N3P4 AL078604.3-201ENST00000615580 211 ntBASIC0.69□□□□□ -2.3
VPS8Q8N3P4 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC0.69□□□□□ -2.3
VPS8Q8N3P4 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.68□□□□□ -2.3
VPS8Q8N3P4 RNU6-140P-201ENST00000384566 108 ntBASIC0.68□□□□□ -2.3
VPS8Q8N3P4 RNA5SP501-201ENST00000410990 112 ntBASIC0.68□□□□□ -2.3
VPS8Q8N3P4 AC069282.1-201ENST00000411911 526 ntBASIC0.68□□□□□ -2.3
VPS8Q8N3P4 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.68□□□□□ -2.3
VPS8Q8N3P4 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC0.68□□□□□ -2.3
VPS8Q8N3P4 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
VPS8Q8N3P4 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC0.68□□□□□ -2.3
VPS8Q8N3P4 KATNBL1P6-201ENST00000453433 915 ntBASIC0.68□□□□□ -2.3
VPS8Q8N3P4 AC006512.1-201ENST00000468816 291 ntBASIC0.68□□□□□ -2.3
VPS8Q8N3P4 AC113420.1-201ENST00000507903 571 ntBASIC0.68□□□□□ -2.3
VPS8Q8N3P4 AC105313.1-201ENST00000509121 353 ntBASIC0.68□□□□□ -2.3
VPS8Q8N3P4 SNORA48.9-201ENST00000516419 162 ntBASIC0.68□□□□□ -2.3
VPS8Q8N3P4 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC0.68□□□□□ -2.3
VPS8Q8N3P4 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC0.68□□□□□ -2.3
VPS8Q8N3P4 AC104229.1-201ENST00000561364 255 ntBASIC0.68□□□□□ -2.3
VPS8Q8N3P4 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.68□□□□□ -2.3
VPS8Q8N3P4 GAS5-AS1-201ENST00000602767 694 ntBASIC0.68□□□□□ -2.3
VPS8Q8N3P4 AL031176.1-201ENST00000604554 466 ntBASIC0.68□□□□□ -2.3
VPS8Q8N3P4 FTX_3.1-201ENST00000610451 147 ntBASIC0.68□□□□□ -2.3
VPS8Q8N3P4 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
VPS8Q8N3P4 AC091925.1-201ENST00000623204 462 ntBASIC0.68□□□□□ -2.3
VPS8Q8N3P4 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.68□□□□□ -2.3
VPS8Q8N3P4 RNU1-36P-201ENST00000365130 165 ntBASIC0.67□□□□□ -2.3
VPS8Q8N3P4 VTRNA1-3-201ENST00000365645 89 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms