Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.82□□□□□ -1.96
PRPF39Q86UA1 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
PRPF39Q86UA1 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.82□□□□□ -1.96
PRPF39Q86UA1 AL136360.1-201ENST00000503377 1900 ntBASIC2.82□□□□□ -1.96
PRPF39Q86UA1 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.82□□□□□ -1.96
PRPF39Q86UA1 AC062016.1-201ENST00000355719 319 ntBASIC2.82□□□□□ -1.96
PRPF39Q86UA1 RNU1-109P-201ENST00000383960 147 ntBASIC2.82□□□□□ -1.96
PRPF39Q86UA1 SNORD116-9-201ENST00000384000 95 ntBASIC2.82□□□□□ -1.96
PRPF39Q86UA1 SNORD116-3-201ENST00000384287 95 ntBASIC2.82□□□□□ -1.96
PRPF39Q86UA1 RNU6-348P-201ENST00000384386 107 ntBASIC2.82□□□□□ -1.96
PRPF39Q86UA1 SNORD116-7-201ENST00000384404 95 ntBASIC2.82□□□□□ -1.96
PRPF39Q86UA1 SNORD116-5-201ENST00000384462 95 ntBASIC2.82□□□□□ -1.96
PRPF39Q86UA1 MIR454-201ENST00000390180 115 ntBASIC2.82□□□□□ -1.96
PRPF39Q86UA1 AL592148.1-201ENST00000413568 445 ntBASIC2.82□□□□□ -1.96
PRPF39Q86UA1 OR6C66P-201ENST00000414917 930 ntBASIC2.82□□□□□ -1.96
PRPF39Q86UA1 RPL21P90-201ENST00000415692 466 ntBASIC2.82□□□□□ -1.96
PRPF39Q86UA1 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.82□□□□□ -1.96
PRPF39Q86UA1 NUP35P1-201ENST00000422734 947 ntBASIC2.82□□□□□ -1.96
PRPF39Q86UA1 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PRPF39Q86UA1 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.82□□□□□ -1.96
PRPF39Q86UA1 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.82□□□□□ -1.96
PRPF39Q86UA1 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.82□□□□□ -1.96
PRPF39Q86UA1 MTCO3P5-201ENST00000433620 714 ntBASIC2.82□□□□□ -1.96
PRPF39Q86UA1 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.82□□□□□ -1.96
PRPF39Q86UA1 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.82□□□□□ -1.96
PRPF39Q86UA1 MTND4P32-201ENST00000437189 1237 ntBASIC2.82□□□□□ -1.96
PRPF39Q86UA1 MRPL50P4-201ENST00000446432 475 ntBASIC2.82□□□□□ -1.96
PRPF39Q86UA1 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PRPF39Q86UA1 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.82□□□□□ -1.96
PRPF39Q86UA1 C1DP4-201ENST00000455429 424 ntBASIC2.82□□□□□ -1.96
PRPF39Q86UA1 snoU109.2-201ENST00000459316 135 ntBASIC2.82□□□□□ -1.96
PRPF39Q86UA1 AC008716.1-201ENST00000511084 513 ntBASIC2.82□□□□□ -1.96
PRPF39Q86UA1 AC010493.1-201ENST00000513479 292 ntBASIC2.82□□□□□ -1.96
PRPF39Q86UA1 AC114781.4-201ENST00000513707 639 ntBASIC2.82□□□□□ -1.96
PRPF39Q86UA1 RNU6-685P-201ENST00000517088 95 ntBASIC2.82□□□□□ -1.96
PRPF39Q86UA1 SCARNA3-201ENST00000517097 143 ntBASIC2.82□□□□□ -1.96
PRPF39Q86UA1 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.82□□□□□ -1.96
PRPF39Q86UA1 AC079600.2-201ENST00000550076 130 ntBASIC2.82□□□□□ -1.96
PRPF39Q86UA1 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.82□□□□□ -1.96
PRPF39Q86UA1 SUB1P2-201ENST00000556401 297 ntBASIC2.82□□□□□ -1.96
PRPF39Q86UA1 AC025678.1-201ENST00000567861 338 ntBASIC2.82□□□□□ -1.96
PRPF39Q86UA1 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2.82□□□□□ -1.96
PRPF39Q86UA1 AC008121.1-201ENST00000603244 268 ntBASIC2.82□□□□□ -1.96
PRPF39Q86UA1 RPL23AP88-201ENST00000605759 454 ntBASIC2.82□□□□□ -1.96
PRPF39Q86UA1 RN7SKP299-201ENST00000606679 301 ntBASIC2.82□□□□□ -1.96
PRPF39Q86UA1 AL359198.2-201ENST00000611836 194 ntBASIC2.82□□□□□ -1.96
PRPF39Q86UA1 AC005332.10-201ENST00000612725 619 ntBASIC2.82□□□□□ -1.96
PRPF39Q86UA1 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.82□□□□□ -1.96
PRPF39Q86UA1 AC092656.1-203ENST00000624134 423 ntBASIC2.82□□□□□ -1.96
PRPF39Q86UA1 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.82□□□□□ -1.96
PRPF39Q86UA1 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.82□□□□□ -1.96
PRPF39Q86UA1 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
PRPF39Q86UA1 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
PRPF39Q86UA1 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.82□□□□□ -1.96
PRPF39Q86UA1 AC092447.7-201ENST00000422212 1621 ntBASIC2.82□□□□□ -1.96
PRPF39Q86UA1 AL109809.4-201ENST00000603520 2185 ntBASIC2.81□□□□□ -1.96
PRPF39Q86UA1 AC138393.1-203ENST00000327086 343 ntBASIC2.81□□□□□ -1.96
PRPF39Q86UA1 RNU6-486P-201ENST00000363116 107 ntBASIC2.81□□□□□ -1.96
PRPF39Q86UA1 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
PRPF39Q86UA1 RNU6-74P-201ENST00000384235 107 ntBASIC2.81□□□□□ -1.96
PRPF39Q86UA1 MIR578-201ENST00000384828 96 ntBASIC2.81□□□□□ -1.96
PRPF39Q86UA1 MIR196B-201ENST00000384852 84 ntBASIC2.81□□□□□ -1.96
PRPF39Q86UA1 MIR518D-201ENST00000385014 87 ntBASIC2.81□□□□□ -1.96
PRPF39Q86UA1 U3.37-201ENST00000408528 213 ntBASIC2.81□□□□□ -1.96
PRPF39Q86UA1 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.81□□□□□ -1.96
PRPF39Q86UA1 BX276092.3-201ENST00000424182 230 ntBASIC2.81□□□□□ -1.96
PRPF39Q86UA1 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.81□□□□□ -1.96
PRPF39Q86UA1 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.81□□□□□ -1.96
PRPF39Q86UA1 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.81□□□□□ -1.96
PRPF39Q86UA1 AC004383.1-201ENST00000438135 289 ntBASIC2.81□□□□□ -1.96
PRPF39Q86UA1 MTCO1P19-201ENST00000443487 500 ntBASIC2.81□□□□□ -1.96
PRPF39Q86UA1 AL360221.1-201ENST00000445989 335 ntBASIC2.81□□□□□ -1.96
PRPF39Q86UA1 RPS29P15-201ENST00000458329 171 ntBASIC2.81□□□□□ -1.96
PRPF39Q86UA1 SNORD109B-201ENST00000458961 67 ntBASIC2.81□□□□□ -1.96
PRPF39Q86UA1 SNORD109A-201ENST00000459128 67 ntBASIC2.81□□□□□ -1.96
PRPF39Q86UA1 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.81□□□□□ -1.96
PRPF39Q86UA1 AC006512.1-201ENST00000468816 291 ntBASIC2.81□□□□□ -1.96
PRPF39Q86UA1 RPL36AP48-201ENST00000485521 314 ntBASIC2.81□□□□□ -1.96
PRPF39Q86UA1 HMGB1P30-201ENST00000492455 606 ntBASIC2.81□□□□□ -1.96
PRPF39Q86UA1 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
PRPF39Q86UA1 AC117522.3-201ENST00000507974 584 ntBASIC2.81□□□□□ -1.96
PRPF39Q86UA1 SNORA25.11-201ENST00000515935 105 ntBASIC2.81□□□□□ -1.96
PRPF39Q86UA1 RN7SKP298-201ENST00000515950 94 ntBASIC2.81□□□□□ -1.96
PRPF39Q86UA1 AP002963.1-201ENST00000530590 184 ntBASIC2.81□□□□□ -1.96
PRPF39Q86UA1 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.81□□□□□ -1.96
PRPF39Q86UA1 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
PRPF39Q86UA1 ZNF861P-201ENST00000588126 639 ntBASIC2.81□□□□□ -1.96
PRPF39Q86UA1 AL670379.10-201ENST00000604330 253 ntBASIC2.81□□□□□ -1.96
PRPF39Q86UA1 AL670379.9-201ENST00000605428 253 ntBASIC2.81□□□□□ -1.96
PRPF39Q86UA1 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
PRPF39Q86UA1 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
PRPF39Q86UA1 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.81□□□□□ -1.96
PRPF39Q86UA1 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
PRPF39Q86UA1 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.8□□□□□ -1.96
PRPF39Q86UA1 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
PRPF39Q86UA1 MIR449A-201ENST00000362113 91 ntBASIC2.8□□□□□ -1.96
PRPF39Q86UA1 RNU1-112P-201ENST00000364401 164 ntBASIC2.8□□□□□ -1.96
PRPF39Q86UA1 AL133475.1-201ENST00000404414 305 ntBASIC2.8□□□□□ -1.96
PRPF39Q86UA1 AL031667.1-201ENST00000440222 725 ntBASIC2.8□□□□□ -1.96
PRPF39Q86UA1 AC008571.1-201ENST00000467232 300 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms