Protein–RNA interactions for Protein: Q6ZT12

UBR3, E3 ubiquitin-protein ligase UBR3, humanhuman

Predictions only

Length 1,888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3Q6ZT12 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.46□□□□□ -2.34
UBR3Q6ZT12 AC106800.4-201ENST00000614905 153 ntBASIC0.46□□□□□ -2.34
UBR3Q6ZT12 Y_RNA.280-201ENST00000364765 112 ntBASIC0.46□□□□□ -2.34
UBR3Q6ZT12 SNORA29-201ENST00000384183 140 ntBASIC0.46□□□□□ -2.34
UBR3Q6ZT12 AC009518.2-201ENST00000418056 731 ntBASIC0.46□□□□□ -2.34
UBR3Q6ZT12 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.46□□□□□ -2.34
UBR3Q6ZT12 RPL36P19-201ENST00000430744 301 ntBASIC0.46□□□□□ -2.34
UBR3Q6ZT12 AC024082.2-201ENST00000434771 238 ntBASIC0.46□□□□□ -2.34
UBR3Q6ZT12 RPS15AP5-201ENST00000436276 388 ntBASIC0.46□□□□□ -2.34
UBR3Q6ZT12 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.46□□□□□ -2.34
UBR3Q6ZT12 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.46□□□□□ -2.34
UBR3Q6ZT12 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC0.46□□□□□ -2.34
UBR3Q6ZT12 RNU6-1095P-201ENST00000516148 108 ntBASIC0.46□□□□□ -2.34
UBR3Q6ZT12 SCARNA16.2-201ENST00000516520 172 ntBASIC0.46□□□□□ -2.34
UBR3Q6ZT12 AC233702.2-202ENST00000562547 291 ntBASIC0.46□□□□□ -2.34
UBR3Q6ZT12 MIR4661-201ENST00000582720 75 ntBASIC0.46□□□□□ -2.34
UBR3Q6ZT12 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.46□□□□□ -2.34
UBR3Q6ZT12 AC010615.3-201ENST00000597319 394 ntBASIC0.46□□□□□ -2.34
UBR3Q6ZT12 AL589743.7-201ENST00000612637 233 ntBASIC0.46□□□□□ -2.34
UBR3Q6ZT12 AC008498.1-201ENST00000613012 531 ntBASIC0.46□□□□□ -2.34
UBR3Q6ZT12 AL391516.1-201ENST00000554380 2449 ntBASIC0.45□□□□□ -2.34
UBR3Q6ZT12 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
UBR3Q6ZT12 ZNF680P1-201ENST00000436625 1469 ntBASIC0.45□□□□□ -2.34
UBR3Q6ZT12 MIR518D-201ENST00000385014 87 ntBASIC0.45□□□□□ -2.34
UBR3Q6ZT12 MIR95-201ENST00000385072 81 ntBASIC0.45□□□□□ -2.34
UBR3Q6ZT12 EIF4EP2-201ENST00000422816 654 ntBASIC0.45□□□□□ -2.34
UBR3Q6ZT12 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.45□□□□□ -2.34
UBR3Q6ZT12 FTH1P12-201ENST00000432137 551 ntBASIC0.45□□□□□ -2.34
UBR3Q6ZT12 CR769776.1-201ENST00000441254 787 ntBASIC0.45□□□□□ -2.34
UBR3Q6ZT12 PRELID3BP1-201ENST00000457142 540 ntBASIC0.45□□□□□ -2.34
UBR3Q6ZT12 SNORD124-201ENST00000459577 104 ntBASIC0.45□□□□□ -2.34
UBR3Q6ZT12 HAR1A.1-201ENST00000459583 118 ntBASIC0.45□□□□□ -2.34
UBR3Q6ZT12 RNU7-40P-201ENST00000516397 64 ntBASIC0.45□□□□□ -2.34
UBR3Q6ZT12 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.45□□□□□ -2.34
UBR3Q6ZT12 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC0.45□□□□□ -2.34
UBR3Q6ZT12 BX322635.1-201ENST00000605804 496 ntBASIC0.45□□□□□ -2.34
UBR3Q6ZT12 RNU6-115P-201ENST00000364310 107 ntBASIC0.44□□□□□ -2.34
UBR3Q6ZT12 Y_RNA.274-201ENST00000364714 101 ntBASIC0.44□□□□□ -2.34
UBR3Q6ZT12 SNORA50A-201ENST00000384225 134 ntBASIC0.44□□□□□ -2.34
UBR3Q6ZT12 MIR218-1-201ENST00000384999 110 ntBASIC0.44□□□□□ -2.34
UBR3Q6ZT12 AL117342.1-201ENST00000404861 406 ntBASIC0.44□□□□□ -2.34
UBR3Q6ZT12 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC0.44□□□□□ -2.34
UBR3Q6ZT12 USP9YP24-201ENST00000434374 697 ntBASIC0.44□□□□□ -2.34
UBR3Q6ZT12 AL049734.2-201ENST00000441066 616 ntBASIC0.44□□□□□ -2.34
UBR3Q6ZT12 AL157398.1-201ENST00000452981 186 ntBASIC0.44□□□□□ -2.34
UBR3Q6ZT12 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC0.44□□□□□ -2.34
UBR3Q6ZT12 RNA5SP57-201ENST00000459463 123 ntBASIC0.44□□□□□ -2.34
UBR3Q6ZT12 MRPS17P3-201ENST00000465453 385 ntBASIC0.44□□□□□ -2.34
UBR3Q6ZT12 AL049714.1-201ENST00000466686 347 ntBASIC0.44□□□□□ -2.34
UBR3Q6ZT12 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC0.44□□□□□ -2.34
UBR3Q6ZT12 SNORA4.4-201ENST00000515921 135 ntBASIC0.44□□□□□ -2.34
UBR3Q6ZT12 RNU6ATAC13P-201ENST00000516152 131 ntBASIC0.44□□□□□ -2.34
UBR3Q6ZT12 AP003034.1-201ENST00000534621 422 ntBASIC0.44□□□□□ -2.34
UBR3Q6ZT12 ABBA01006766.1-201ENST00000584728 294 ntBASIC0.44□□□□□ -2.34
UBR3Q6ZT12 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.44□□□□□ -2.34
UBR3Q6ZT12 MIR6759-201ENST00000638110 65 ntBASIC0.44□□□□□ -2.34
UBR3Q6ZT12 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
UBR3Q6ZT12 MTND5P30-201ENST00000452896 1731 ntBASIC0.44□□□□□ -2.34
UBR3Q6ZT12 RNU6-26P-201ENST00000383985 107 ntBASIC0.44□□□□□ -2.34
UBR3Q6ZT12 MIR608-201ENST00000384820 100 ntBASIC0.44□□□□□ -2.34
UBR3Q6ZT12 RNU11-3P-201ENST00000391111 133 ntBASIC0.44□□□□□ -2.34
UBR3Q6ZT12 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.44□□□□□ -2.34
UBR3Q6ZT12 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.44□□□□□ -2.34
UBR3Q6ZT12 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.44□□□□□ -2.34
UBR3Q6ZT12 PSMC1P5-201ENST00000512850 177 ntBASIC0.44□□□□□ -2.34
UBR3Q6ZT12 SNORA31.22-201ENST00000517204 135 ntBASIC0.44□□□□□ -2.34
UBR3Q6ZT12 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC0.44□□□□□ -2.34
UBR3Q6ZT12 AC006518.2-201ENST00000542513 940 ntBASIC0.44□□□□□ -2.34
UBR3Q6ZT12 AC084824.5-201ENST00000612009 413 ntBASIC0.44□□□□□ -2.34
UBR3Q6ZT12 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.44□□□□□ -2.34
UBR3Q6ZT12 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.44□□□□□ -2.34
UBR3Q6ZT12 AL359854.1-201ENST00000614203 1594 ntBASIC0.43□□□□□ -2.34
UBR3Q6ZT12 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.43□□□□□ -2.34
UBR3Q6ZT12 MTCO1P56-201ENST00000401674 224 ntBASIC0.43□□□□□ -2.34
UBR3Q6ZT12 MIR1303-201ENST00000408625 86 ntBASIC0.43□□□□□ -2.34
UBR3Q6ZT12 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC0.43□□□□□ -2.34
UBR3Q6ZT12 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC0.43□□□□□ -2.34
UBR3Q6ZT12 AC136932.1-201ENST00000574771 208 ntBASIC0.43□□□□□ -2.34
UBR3Q6ZT12 MIR4765-201ENST00000585007 77 ntBASIC0.43□□□□□ -2.34
UBR3Q6ZT12 AP000654.2-201ENST00000605633 586 ntBASIC0.43□□□□□ -2.34
UBR3Q6ZT12 AC091965.5-201ENST00000624785 342 ntBASIC0.43□□□□□ -2.34
UBR3Q6ZT12 U3.8-201ENST00000363675 217 ntBASIC0.42□□□□□ -2.34
UBR3Q6ZT12 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC0.42□□□□□ -2.34
UBR3Q6ZT12 KATNBL1P6-201ENST00000453433 915 ntBASIC0.42□□□□□ -2.34
UBR3Q6ZT12 AL133373.1-201ENST00000497098 94 ntBASIC0.42□□□□□ -2.34
UBR3Q6ZT12 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC0.42□□□□□ -2.34
UBR3Q6ZT12 AP006587.4-201ENST00000526053 529 ntBASIC0.42□□□□□ -2.34
UBR3Q6ZT12 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.42□□□□□ -2.34
UBR3Q6ZT12 AL359212.1-201ENST00000556608 614 ntBASIC0.42□□□□□ -2.34
UBR3Q6ZT12 AC012414.6-201ENST00000568241 401 ntBASIC0.42□□□□□ -2.34
UBR3Q6ZT12 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
UBR3Q6ZT12 RNU6-418P-201ENST00000384035 107 ntBASIC0.41□□□□□ -2.34
UBR3Q6ZT12 AL449283.1-202ENST00000418249 604 ntBASIC0.41□□□□□ -2.34
UBR3Q6ZT12 MTCO2P20-201ENST00000437339 673 ntBASIC0.41□□□□□ -2.34
UBR3Q6ZT12 MTND5P8-201ENST00000449817 1083 ntBASIC0.41□□□□□ -2.34
UBR3Q6ZT12 CYP2C59P-201ENST00000457790 269 ntBASIC0.41□□□□□ -2.34
UBR3Q6ZT12 RNU5A-7P-201ENST00000515979 116 ntBASIC0.41□□□□□ -2.34
UBR3Q6ZT12 BNIP3P16-201ENST00000589779 534 ntBASIC0.41□□□□□ -2.34
UBR3Q6ZT12 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.41□□□□□ -2.34
UBR3Q6ZT12 AC021171.1-201ENST00000603137 706 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms