Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AL627311.1-201ENST00000431514 115 ntBASIC2.18□□□□□ -2.06
NIPAL3Q6P499 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
NIPAL3Q6P499 AC090515.1-201ENST00000465295 476 ntBASIC2.18□□□□□ -2.06
NIPAL3Q6P499 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.18□□□□□ -2.06
NIPAL3Q6P499 AC140059.1-201ENST00000489238 361 ntBASIC2.18□□□□□ -2.06
NIPAL3Q6P499 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.18□□□□□ -2.06
NIPAL3Q6P499 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.18□□□□□ -2.06
NIPAL3Q6P499 AC112206.3-201ENST00000514578 389 ntBASIC2.18□□□□□ -2.06
NIPAL3Q6P499 RNU2-46P-201ENST00000517038 113 ntBASIC2.18□□□□□ -2.06
NIPAL3Q6P499 RPL7P20-201ENST00000520308 745 ntBASIC2.18□□□□□ -2.06
NIPAL3Q6P499 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.18□□□□□ -2.06
NIPAL3Q6P499 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC2.18□□□□□ -2.06
NIPAL3Q6P499 MIR3162-201ENST00000581818 82 ntBASIC2.18□□□□□ -2.06
NIPAL3Q6P499 AC067747.1-201ENST00000608026 250 ntBASIC2.18□□□□□ -2.06
NIPAL3Q6P499 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.18□□□□□ -2.06
NIPAL3Q6P499 AC091304.9-201ENST00000612091 226 ntBASIC2.18□□□□□ -2.06
NIPAL3Q6P499 AC245884.12-201ENST00000615364 59 ntBASIC2.18□□□□□ -2.06
NIPAL3Q6P499 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.18□□□□□ -2.06
NIPAL3Q6P499 AC007494.3-201ENST00000624660 743 ntBASIC2.18□□□□□ -2.06
NIPAL3Q6P499 AC008993.2-201ENST00000631744 806 ntBASIC2.18□□□□□ -2.06
NIPAL3Q6P499 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.18□□□□□ -2.06
NIPAL3Q6P499 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.18□□□□□ -2.06
NIPAL3Q6P499 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
NIPAL3Q6P499 CKAP2P1-201ENST00000555477 2049 ntBASIC2.18□□□□□ -2.06
NIPAL3Q6P499 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
NIPAL3Q6P499 SNORD3E-201ENST00000362899 217 ntBASIC2.17□□□□□ -2.06
NIPAL3Q6P499 SNORA3A-201ENST00000364113 130 ntBASIC2.17□□□□□ -2.06
NIPAL3Q6P499 MIR518C-201ENST00000384822 101 ntBASIC2.17□□□□□ -2.06
NIPAL3Q6P499 RNA5SP111-201ENST00000411386 101 ntBASIC2.17□□□□□ -2.06
NIPAL3Q6P499 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.17□□□□□ -2.06
NIPAL3Q6P499 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.17□□□□□ -2.06
NIPAL3Q6P499 MTND6P13-201ENST00000443510 523 ntBASIC2.17□□□□□ -2.06
NIPAL3Q6P499 AC124916.1-201ENST00000444020 547 ntBASIC2.17□□□□□ -2.06
NIPAL3Q6P499 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.17□□□□□ -2.06
NIPAL3Q6P499 IFNA11P-201ENST00000446352 526 ntBASIC2.17□□□□□ -2.06
NIPAL3Q6P499 ART2BP-201ENST00000453501 499 ntBASIC2.17□□□□□ -2.06
NIPAL3Q6P499 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.17□□□□□ -2.06
NIPAL3Q6P499 AC073901.1-201ENST00000462471 408 ntBASIC2.17□□□□□ -2.06
NIPAL3Q6P499 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
NIPAL3Q6P499 MTAPP1-201ENST00000489154 819 ntBASIC2.17□□□□□ -2.06
NIPAL3Q6P499 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.17□□□□□ -2.06
NIPAL3Q6P499 AC114781.4-201ENST00000513707 639 ntBASIC2.17□□□□□ -2.06
NIPAL3Q6P499 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.17□□□□□ -2.06
NIPAL3Q6P499 AC078814.3-201ENST00000553036 491 ntBASIC2.17□□□□□ -2.06
NIPAL3Q6P499 RPS15AP11-201ENST00000594193 385 ntBASIC2.17□□□□□ -2.06
NIPAL3Q6P499 AL355297.2-201ENST00000604792 129 ntBASIC2.17□□□□□ -2.06
NIPAL3Q6P499 AC068276.1-201ENST00000605793 379 ntBASIC2.17□□□□□ -2.06
NIPAL3Q6P499 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.17□□□□□ -2.06
NIPAL3Q6P499 AC008250.2-201ENST00000615261 205 ntBASIC2.17□□□□□ -2.06
NIPAL3Q6P499 AC010378.1-201ENST00000619270 362 ntBASIC2.17□□□□□ -2.06
NIPAL3Q6P499 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.17□□□□□ -2.06
NIPAL3Q6P499 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.17□□□□□ -2.06
NIPAL3Q6P499 AL157786.1-207ENST00000627771 695 ntBASIC2.17□□□□□ -2.06
NIPAL3Q6P499 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.17□□□□□ -2.06
NIPAL3Q6P499 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.17□□□□□ -2.06
NIPAL3Q6P499 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.17□□□□□ -2.06
NIPAL3Q6P499 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
NIPAL3Q6P499 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.16□□□□□ -2.06
NIPAL3Q6P499 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.16□□□□□ -2.06
NIPAL3Q6P499 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.16□□□□□ -2.06
NIPAL3Q6P499 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
NIPAL3Q6P499 RNY4P34-201ENST00000364779 95 ntBASIC2.16□□□□□ -2.06
NIPAL3Q6P499 RNU6-1179P-201ENST00000384667 107 ntBASIC2.16□□□□□ -2.06
NIPAL3Q6P499 MIR10A-201ENST00000385043 110 ntBASIC2.16□□□□□ -2.06
NIPAL3Q6P499 AL359511.1-201ENST00000402970 211 ntBASIC2.16□□□□□ -2.06
NIPAL3Q6P499 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.16□□□□□ -2.06
NIPAL3Q6P499 RPS3AP3-201ENST00000411933 242 ntBASIC2.16□□□□□ -2.06
NIPAL3Q6P499 AF274854.1-201ENST00000413236 615 ntBASIC2.16□□□□□ -2.06
NIPAL3Q6P499 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.16□□□□□ -2.06
NIPAL3Q6P499 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.16□□□□□ -2.06
NIPAL3Q6P499 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.16□□□□□ -2.06
NIPAL3Q6P499 AC104850.1-201ENST00000435940 476 ntBASIC2.16□□□□□ -2.06
NIPAL3Q6P499 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.16□□□□□ -2.06
NIPAL3Q6P499 NDUFB1P2-201ENST00000449477 176 ntBASIC2.16□□□□□ -2.06
NIPAL3Q6P499 AC011753.1-201ENST00000451001 220 ntBASIC2.16□□□□□ -2.06
NIPAL3Q6P499 CYP2C59P-201ENST00000457790 269 ntBASIC2.16□□□□□ -2.06
NIPAL3Q6P499 snoU109.2-201ENST00000459316 135 ntBASIC2.16□□□□□ -2.06
NIPAL3Q6P499 MED28P2-201ENST00000475771 317 ntBASIC2.16□□□□□ -2.06
NIPAL3Q6P499 RAP1BP2-201ENST00000478270 544 ntBASIC2.16□□□□□ -2.06
NIPAL3Q6P499 AC068781.1-201ENST00000488231 618 ntBASIC2.16□□□□□ -2.06
NIPAL3Q6P499 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.16□□□□□ -2.06
NIPAL3Q6P499 Vault.3-201ENST00000516676 95 ntBASIC2.16□□□□□ -2.06
NIPAL3Q6P499 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.16□□□□□ -2.06
NIPAL3Q6P499 AC027176.1-201ENST00000560204 514 ntBASIC2.16□□□□□ -2.06
NIPAL3Q6P499 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.16□□□□□ -2.06
NIPAL3Q6P499 MIR3915-201ENST00000578518 97 ntBASIC2.16□□□□□ -2.06
NIPAL3Q6P499 MIR3682-201ENST00000581338 84 ntBASIC2.16□□□□□ -2.06
NIPAL3Q6P499 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.16□□□□□ -2.06
NIPAL3Q6P499 AC009233.1-201ENST00000616477 371 ntBASIC2.16□□□□□ -2.06
NIPAL3Q6P499 U4atac.1-201ENST00000618345 95 ntBASIC2.16□□□□□ -2.06
NIPAL3Q6P499 AC019226.2-201ENST00000625973 424 ntBASIC2.16□□□□□ -2.06
NIPAL3Q6P499 MIR3529-201ENST00000637713 78 ntBASIC2.16□□□□□ -2.06
NIPAL3Q6P499 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
NIPAL3Q6P499 AC069528.2-201ENST00000624849 1991 ntBASIC2.16□□□□□ -2.06
NIPAL3Q6P499 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
NIPAL3Q6P499 Y_RNA.22-201ENST00000362492 102 ntBASIC2.15□□□□□ -2.07
NIPAL3Q6P499 SNORD114-19-201ENST00000363072 75 ntBASIC2.15□□□□□ -2.07
NIPAL3Q6P499 RNU6-179P-201ENST00000363350 107 ntBASIC2.15□□□□□ -2.07
NIPAL3Q6P499 RNU1-91P-201ENST00000364746 163 ntBASIC2.15□□□□□ -2.07
NIPAL3Q6P499 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms