Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC5.18□□□□□ -1.58
RNF20Q5VTR2 AL162424.1-201ENST00000602325 221 ntBASIC5.18□□□□□ -1.58
RNF20Q5VTR2 AL078605.1-201ENST00000603529 500 ntBASIC5.18□□□□□ -1.58
RNF20Q5VTR2 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF20Q5VTR2 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
RNF20Q5VTR2 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
RNF20Q5VTR2 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RNF20Q5VTR2 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
RNF20Q5VTR2 AL592437.2-201ENST00000421655 2434 ntBASIC5.17□□□□□ -1.58
RNF20Q5VTR2 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RNF20Q5VTR2 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RNF20Q5VTR2 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RNF20Q5VTR2 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RNF20Q5VTR2 AC025031.4-201ENST00000621248 3271 ntBASIC5.17□□□□□ -1.58
RNF20Q5VTR2 RNA5SP505-201ENST00000364748 108 ntBASIC5.17□□□□□ -1.58
RNF20Q5VTR2 RNU6-843P-201ENST00000384454 104 ntBASIC5.17□□□□□ -1.58
RNF20Q5VTR2 EIF4A1P3-201ENST00000411521 244 ntBASIC5.17□□□□□ -1.58
RNF20Q5VTR2 AC004552.1-201ENST00000419089 348 ntBASIC5.17□□□□□ -1.58
RNF20Q5VTR2 CYP4F29P-201ENST00000420685 446 ntBASIC5.17□□□□□ -1.58
RNF20Q5VTR2 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC5.17□□□□□ -1.58
RNF20Q5VTR2 EIF1P2-201ENST00000428233 350 ntBASIC5.17□□□□□ -1.58
RNF20Q5VTR2 AL353748.1-201ENST00000440753 474 ntBASIC5.17□□□□□ -1.58
RNF20Q5VTR2 AL078601.1-201ENST00000444542 271 ntBASIC5.17□□□□□ -1.58
RNF20Q5VTR2 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC5.17□□□□□ -1.58
RNF20Q5VTR2 ANP32BP2-201ENST00000454525 545 ntBASIC5.17□□□□□ -1.58
RNF20Q5VTR2 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC5.17□□□□□ -1.58
RNF20Q5VTR2 RPS26P3-201ENST00000470205 348 ntBASIC5.17□□□□□ -1.58
RNF20Q5VTR2 AC090543.2-201ENST00000483963 348 ntBASIC5.17□□□□□ -1.58
RNF20Q5VTR2 AC004057.1-201ENST00000485827 348 ntBASIC5.17□□□□□ -1.58
RNF20Q5VTR2 RPL7P47-201ENST00000497299 556 ntBASIC5.17□□□□□ -1.58
RNF20Q5VTR2 RNU2-31P-201ENST00000516954 155 ntBASIC5.17□□□□□ -1.58
RNF20Q5VTR2 SNORA31.20-201ENST00000517111 133 ntBASIC5.17□□□□□ -1.58
RNF20Q5VTR2 RNA5SP165-201ENST00000517142 115 ntBASIC5.17□□□□□ -1.58
RNF20Q5VTR2 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC5.17□□□□□ -1.58
RNF20Q5VTR2 AC113403.1-201ENST00000604910 193 ntBASIC5.17□□□□□ -1.58
RNF20Q5VTR2 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC5.17□□□□□ -1.58
RNF20Q5VTR2 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC5.17□□□□□ -1.58
RNF20Q5VTR2 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.17□□□□□ -1.58
RNF20Q5VTR2 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
RNF20Q5VTR2 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.17□□□□□ -1.58
RNF20Q5VTR2 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC5.17□□□□□ -1.58
RNF20Q5VTR2 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RNF20Q5VTR2 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNF20Q5VTR2 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNF20Q5VTR2 MIR331-201ENST00000362302 94 ntBASIC5.16□□□□□ -1.58
RNF20Q5VTR2 RNU6-78P-201ENST00000362897 107 ntBASIC5.16□□□□□ -1.58
RNF20Q5VTR2 RNU6-318P-201ENST00000384283 103 ntBASIC5.16□□□□□ -1.58
RNF20Q5VTR2 Y_RNA.504-201ENST00000384481 104 ntBASIC5.16□□□□□ -1.58
RNF20Q5VTR2 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
RNF20Q5VTR2 RNA5SP332-201ENST00000391063 115 ntBASIC5.16□□□□□ -1.58
RNF20Q5VTR2 SNORD66.1-201ENST00000391230 76 ntBASIC5.16□□□□□ -1.58
RNF20Q5VTR2 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.16□□□□□ -1.58
RNF20Q5VTR2 AC005002.2-201ENST00000438228 269 ntBASIC5.16□□□□□ -1.58
RNF20Q5VTR2 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC5.16□□□□□ -1.58
RNF20Q5VTR2 RPL23AP75-201ENST00000491601 451 ntBASIC5.16□□□□□ -1.58
RNF20Q5VTR2 RN7SL810P-201ENST00000493031 276 ntBASIC5.16□□□□□ -1.58
RNF20Q5VTR2 Y_RNA.662-201ENST00000516028 97 ntBASIC5.16□□□□□ -1.58
RNF20Q5VTR2 Y_RNA.679-201ENST00000516416 91 ntBASIC5.16□□□□□ -1.58
RNF20Q5VTR2 IGLVIV-65-201ENST00000517313 360 ntBASIC5.16□□□□□ -1.58
RNF20Q5VTR2 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC5.16□□□□□ -1.58
RNF20Q5VTR2 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC5.16□□□□□ -1.58
RNF20Q5VTR2 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.16□□□□□ -1.58
RNF20Q5VTR2 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.16□□□□□ -1.58
RNF20Q5VTR2 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.16□□□□□ -1.58
RNF20Q5VTR2 AC072026.1-201ENST00000605023 201 ntBASIC5.16□□□□□ -1.58
RNF20Q5VTR2 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC5.16□□□□□ -1.58
RNF20Q5VTR2 MIR7703-201ENST00000620784 77 ntBASIC5.16□□□□□ -1.58
RNF20Q5VTR2 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC5.16□□□□□ -1.58
RNF20Q5VTR2 MFSD8-216ENST00000641147 4009 ntBASIC5.16□□□□□ -1.58
RNF20Q5VTR2 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
RNF20Q5VTR2 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNF20Q5VTR2 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RNF20Q5VTR2 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RNF20Q5VTR2 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
RNF20Q5VTR2 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.15□□□□□ -1.58
RNF20Q5VTR2 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.15□□□□□ -1.58
RNF20Q5VTR2 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.15□□□□□ -1.58
RNF20Q5VTR2 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RNF20Q5VTR2 Y_RNA.8-201ENST00000362353 102 ntBASIC5.15□□□□□ -1.59
RNF20Q5VTR2 RNU6-326P-201ENST00000365480 107 ntBASIC5.15□□□□□ -1.59
RNF20Q5VTR2 RNU6-968P-201ENST00000384076 107 ntBASIC5.15□□□□□ -1.59
RNF20Q5VTR2 MIR32-201ENST00000384965 70 ntBASIC5.15□□□□□ -1.59
RNF20Q5VTR2 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
RNF20Q5VTR2 RPL17P36-201ENST00000420302 549 ntBASIC5.15□□□□□ -1.59
RNF20Q5VTR2 AC011742.1-201ENST00000431448 434 ntBASIC5.15□□□□□ -1.59
RNF20Q5VTR2 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC5.15□□□□□ -1.59
RNF20Q5VTR2 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.15□□□□□ -1.59
RNF20Q5VTR2 PHBP16-201ENST00000446318 950 ntBASIC5.15□□□□□ -1.59
RNF20Q5VTR2 AL353705.4-201ENST00000449661 238 ntBASIC5.15□□□□□ -1.59
RNF20Q5VTR2 RPS29P22-201ENST00000472363 168 ntBASIC5.15□□□□□ -1.59
RNF20Q5VTR2 KC877373.1-201ENST00000479066 408 ntBASIC5.15□□□□□ -1.59
RNF20Q5VTR2 AC006499.6-201ENST00000511169 607 ntBASIC5.15□□□□□ -1.59
RNF20Q5VTR2 AP004371.1-201ENST00000525240 214 ntBASIC5.15□□□□□ -1.59
RNF20Q5VTR2 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.15□□□□□ -1.59
RNF20Q5VTR2 AC037487.3-201ENST00000606668 112 ntBASIC5.15□□□□□ -1.59
RNF20Q5VTR2 SNORD113-5-201ENST00000607261 78 ntBASIC5.15□□□□□ -1.59
RNF20Q5VTR2 AC140479.6-201ENST00000633535 357 ntBASIC5.15□□□□□ -1.59
RNF20Q5VTR2 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RNF20Q5VTR2 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RNF20Q5VTR2 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 177.9 ms