Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 FABP5P14-201ENST00000437273 393 ntBASIC0.67□□□□□ -2.3
NUP188Q5SRE5 HMGN3P1-201ENST00000453847 193 ntBASIC0.67□□□□□ -2.3
NUP188Q5SRE5 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.67□□□□□ -2.3
NUP188Q5SRE5 RNA5SP57-201ENST00000459463 123 ntBASIC0.67□□□□□ -2.3
NUP188Q5SRE5 VPS26AP1-201ENST00000483197 979 ntBASIC0.67□□□□□ -2.3
NUP188Q5SRE5 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
NUP188Q5SRE5 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.67□□□□□ -2.3
NUP188Q5SRE5 AC025857.1-201ENST00000525252 377 ntBASIC0.67□□□□□ -2.3
NUP188Q5SRE5 MIR5589-201ENST00000579442 60 ntBASIC0.67□□□□□ -2.3
NUP188Q5SRE5 AC015688.2-201ENST00000584523 262 ntBASIC0.67□□□□□ -2.3
NUP188Q5SRE5 HMGN1P30-201ENST00000589286 268 ntBASIC0.67□□□□□ -2.3
NUP188Q5SRE5 AC092953.2-201ENST00000608000 699 ntBASIC0.67□□□□□ -2.3
NUP188Q5SRE5 DUXAP10-204ENST00000612052 616 ntBASIC0.67□□□□□ -2.3
NUP188Q5SRE5 AL078604.3-201ENST00000615580 211 ntBASIC0.67□□□□□ -2.3
NUP188Q5SRE5 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.66□□□□□ -2.3
NUP188Q5SRE5 MTND5P31-201ENST00000419366 1374 ntBASIC0.66□□□□□ -2.3
NUP188Q5SRE5 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
NUP188Q5SRE5 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
NUP188Q5SRE5 RNU11-3P-201ENST00000391111 133 ntBASIC0.66□□□□□ -2.3
NUP188Q5SRE5 RNA5SP299-201ENST00000391203 116 ntBASIC0.66□□□□□ -2.3
NUP188Q5SRE5 BTF3P8-201ENST00000414577 526 ntBASIC0.66□□□□□ -2.3
NUP188Q5SRE5 BEND7P1-201ENST00000422058 457 ntBASIC0.66□□□□□ -2.3
NUP188Q5SRE5 CST2P1-201ENST00000425770 87 ntBASIC0.66□□□□□ -2.3
NUP188Q5SRE5 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.66□□□□□ -2.3
NUP188Q5SRE5 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.66□□□□□ -2.3
NUP188Q5SRE5 DDX3P2-201ENST00000446138 111 ntBASIC0.66□□□□□ -2.3
NUP188Q5SRE5 RNU5A-7P-201ENST00000515979 116 ntBASIC0.66□□□□□ -2.3
NUP188Q5SRE5 SNORA48.9-201ENST00000516419 162 ntBASIC0.66□□□□□ -2.3
NUP188Q5SRE5 AP003327.1-201ENST00000529684 127 ntBASIC0.66□□□□□ -2.3
NUP188Q5SRE5 EIF4A1P12-201ENST00000551910 141 ntBASIC0.66□□□□□ -2.3
NUP188Q5SRE5 MIR4765-201ENST00000585007 77 ntBASIC0.66□□□□□ -2.3
NUP188Q5SRE5 AC146944.4-201ENST00000602697 718 ntBASIC0.66□□□□□ -2.3
NUP188Q5SRE5 AL138963.2-201ENST00000605137 226 ntBASIC0.66□□□□□ -2.3
NUP188Q5SRE5 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.66□□□□□ -2.3
NUP188Q5SRE5 AC016252.1-201ENST00000609721 474 ntBASIC0.66□□□□□ -2.3
NUP188Q5SRE5 MIR8074-201ENST00000615081 81 ntBASIC0.66□□□□□ -2.3
NUP188Q5SRE5 AC087821.2-201ENST00000637086 450 ntBASIC0.66□□□□□ -2.3
NUP188Q5SRE5 AC005832.2-201ENST00000538921 1430 ntBASIC0.65□□□□□ -2.3
NUP188Q5SRE5 Y_RNA.67-201ENST00000362870 100 ntBASIC0.65□□□□□ -2.31
NUP188Q5SRE5 RNU1-23P-201ENST00000363361 144 ntBASIC0.65□□□□□ -2.31
NUP188Q5SRE5 RNA5SP331-201ENST00000364986 107 ntBASIC0.65□□□□□ -2.31
NUP188Q5SRE5 Y_RNA.303-201ENST00000364998 94 ntBASIC0.65□□□□□ -2.31
NUP188Q5SRE5 MED14P1-201ENST00000430517 648 ntBASIC0.65□□□□□ -2.31
NUP188Q5SRE5 AL592447.1-201ENST00000447592 540 ntBASIC0.65□□□□□ -2.31
NUP188Q5SRE5 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC0.65□□□□□ -2.31
NUP188Q5SRE5 SUMO1P1-201ENST00000497904 306 ntBASIC0.65□□□□□ -2.31
NUP188Q5SRE5 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC0.65□□□□□ -2.31
NUP188Q5SRE5 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.65□□□□□ -2.31
NUP188Q5SRE5 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC0.65□□□□□ -2.31
NUP188Q5SRE5 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.65□□□□□ -2.31
NUP188Q5SRE5 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.65□□□□□ -2.31
NUP188Q5SRE5 Y_RNA.167-201ENST00000363735 109 ntBASIC0.64□□□□□ -2.31
NUP188Q5SRE5 SNORD1A-201ENST00000364968 72 ntBASIC0.64□□□□□ -2.31
NUP188Q5SRE5 RNU6-338P-201ENST00000383888 105 ntBASIC0.64□□□□□ -2.31
NUP188Q5SRE5 MIR518A2-201ENST00000384966 87 ntBASIC0.64□□□□□ -2.31
NUP188Q5SRE5 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.64□□□□□ -2.31
NUP188Q5SRE5 SNRPEP7-201ENST00000438350 220 ntBASIC0.64□□□□□ -2.31
NUP188Q5SRE5 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC0.64□□□□□ -2.31
NUP188Q5SRE5 AC099513.1-201ENST00000490423 301 ntBASIC0.64□□□□□ -2.31
NUP188Q5SRE5 MAL2-206ENST00000522187 547 ntTSL 4 BASIC0.64□□□□□ -2.31
NUP188Q5SRE5 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.64□□□□□ -2.31
NUP188Q5SRE5 OR8K4P-201ENST00000534608 872 ntBASIC0.64□□□□□ -2.31
NUP188Q5SRE5 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC0.64□□□□□ -2.31
NUP188Q5SRE5 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC0.64□□□□□ -2.31
NUP188Q5SRE5 AC022202.1-201ENST00000613515 211 ntBASIC0.64□□□□□ -2.31
NUP188Q5SRE5 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
NUP188Q5SRE5 MIR515-2-201ENST00000384883 83 ntBASIC0.64□□□□□ -2.31
NUP188Q5SRE5 MIR515-1-201ENST00000384884 83 ntBASIC0.64□□□□□ -2.31
NUP188Q5SRE5 MIR1265-201ENST00000408444 86 ntBASIC0.64□□□□□ -2.31
NUP188Q5SRE5 TOMM22P2-201ENST00000430735 237 ntBASIC0.64□□□□□ -2.31
NUP188Q5SRE5 RNU6-322P-201ENST00000516010 103 ntBASIC0.64□□□□□ -2.31
NUP188Q5SRE5 SNORA31.6-201ENST00000516241 130 ntBASIC0.64□□□□□ -2.31
NUP188Q5SRE5 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC0.64□□□□□ -2.31
NUP188Q5SRE5 AC005668.1-201ENST00000571142 476 ntBASIC0.64□□□□□ -2.31
NUP188Q5SRE5 AC004775.1-201ENST00000607389 753 ntBASIC0.64□□□□□ -2.31
NUP188Q5SRE5 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.64□□□□□ -2.31
NUP188Q5SRE5 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC0.64□□□□□ -2.31
NUP188Q5SRE5 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
NUP188Q5SRE5 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.63□□□□□ -2.31
NUP188Q5SRE5 MIR329-2-201ENST00000385029 84 ntBASIC0.63□□□□□ -2.31
NUP188Q5SRE5 AL139098.1-201ENST00000407291 389 ntBASIC0.63□□□□□ -2.31
NUP188Q5SRE5 AL035410.1-201ENST00000427409 427 ntBASIC0.63□□□□□ -2.31
NUP188Q5SRE5 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC0.63□□□□□ -2.31
NUP188Q5SRE5 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.63□□□□□ -2.31
NUP188Q5SRE5 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC0.63□□□□□ -2.31
NUP188Q5SRE5 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.63□□□□□ -2.31
NUP188Q5SRE5 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.63□□□□□ -2.31
NUP188Q5SRE5 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC0.63□□□□□ -2.31
NUP188Q5SRE5 AC022387.2-201ENST00000604050 448 ntBASIC0.63□□□□□ -2.31
NUP188Q5SRE5 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.63□□□□□ -2.31
NUP188Q5SRE5 U1.36-201ENST00000620684 176 ntBASIC0.63□□□□□ -2.31
NUP188Q5SRE5 MIR5087-201ENST00000635826 76 ntBASIC0.63□□□□□ -2.31
NUP188Q5SRE5 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC0.62□□□□□ -2.31
NUP188Q5SRE5 AL359854.1-201ENST00000614203 1594 ntBASIC0.62□□□□□ -2.31
NUP188Q5SRE5 AC009310.1-201ENST00000414414 451 ntBASIC0.62□□□□□ -2.31
NUP188Q5SRE5 AL606490.4-201ENST00000423117 127 ntBASIC0.62□□□□□ -2.31
NUP188Q5SRE5 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.62□□□□□ -2.31
NUP188Q5SRE5 AL035666.1-201ENST00000446195 348 ntBASIC0.62□□□□□ -2.31
NUP188Q5SRE5 KATNBL1P6-201ENST00000453433 915 ntBASIC0.62□□□□□ -2.31
NUP188Q5SRE5 AC093677.1-201ENST00000514414 678 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms