Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AC005741.1-201ENST00000511094 432 ntBASIC3.65□□□□□ -1.83
SLC44A4Q53GD3 Y_RNA.718-201ENST00000517110 102 ntBASIC3.65□□□□□ -1.83
SLC44A4Q53GD3 RNA5SP165-201ENST00000517142 115 ntBASIC3.65□□□□□ -1.83
SLC44A4Q53GD3 ATP5F1P5-201ENST00000526403 760 ntBASIC3.65□□□□□ -1.83
SLC44A4Q53GD3 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SLC44A4Q53GD3 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.65□□□□□ -1.83
SLC44A4Q53GD3 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.65□□□□□ -1.83
SLC44A4Q53GD3 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SLC44A4Q53GD3 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.65□□□□□ -1.83
SLC44A4Q53GD3 APOOP1-201ENST00000604695 592 ntBASIC3.65□□□□□ -1.83
SLC44A4Q53GD3 AC004805.2-201ENST00000605382 482 ntBASIC3.65□□□□□ -1.83
SLC44A4Q53GD3 U4.6-201ENST00000621618 127 ntBASIC3.65□□□□□ -1.83
SLC44A4Q53GD3 MIR6852-201ENST00000621699 66 ntBASIC3.65□□□□□ -1.83
SLC44A4Q53GD3 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.65□□□□□ -1.83
SLC44A4Q53GD3 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SLC44A4Q53GD3 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.65□□□□□ -1.83
SLC44A4Q53GD3 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SLC44A4Q53GD3 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SLC44A4Q53GD3 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
SLC44A4Q53GD3 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
SLC44A4Q53GD3 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.64□□□□□ -1.83
SLC44A4Q53GD3 AL049641.1-201ENST00000441055 1948 ntBASIC3.64□□□□□ -1.83
SLC44A4Q53GD3 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SLC44A4Q53GD3 AL079305.1-201ENST00000623159 3008 ntBASIC3.64□□□□□ -1.83
SLC44A4Q53GD3 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SLC44A4Q53GD3 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
SLC44A4Q53GD3 AF127577.6-201ENST00000623352 2191 ntBASIC3.64□□□□□ -1.83
SLC44A4Q53GD3 SNORD3E-201ENST00000362899 217 ntBASIC3.64□□□□□ -1.83
SLC44A4Q53GD3 Y_RNA.128-201ENST00000363391 112 ntBASIC3.64□□□□□ -1.83
SLC44A4Q53GD3 SNORA63C-201ENST00000364578 129 ntBASIC3.64□□□□□ -1.83
SLC44A4Q53GD3 Y_RNA.315-201ENST00000365117 102 ntBASIC3.64□□□□□ -1.83
SLC44A4Q53GD3 Y_RNA.414-201ENST00000384011 101 ntBASIC3.64□□□□□ -1.83
SLC44A4Q53GD3 Y_RNA.500-201ENST00000384466 111 ntBASIC3.64□□□□□ -1.83
SLC44A4Q53GD3 RNU6-45P-201ENST00000384471 107 ntBASIC3.64□□□□□ -1.83
SLC44A4Q53GD3 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
SLC44A4Q53GD3 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.64□□□□□ -1.83
SLC44A4Q53GD3 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.64□□□□□ -1.83
SLC44A4Q53GD3 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.64□□□□□ -1.83
SLC44A4Q53GD3 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.64□□□□□ -1.83
SLC44A4Q53GD3 AC236972.1-201ENST00000433225 199 ntBASIC3.64□□□□□ -1.83
SLC44A4Q53GD3 RPL12P25-201ENST00000455592 494 ntBASIC3.64□□□□□ -1.83
SLC44A4Q53GD3 SNRPGP3-201ENST00000469405 227 ntBASIC3.64□□□□□ -1.83
SLC44A4Q53GD3 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.64□□□□□ -1.83
SLC44A4Q53GD3 RNU6-1170P-201ENST00000515974 106 ntBASIC3.64□□□□□ -1.83
SLC44A4Q53GD3 RNU6-864P-201ENST00000516256 108 ntBASIC3.64□□□□□ -1.83
SLC44A4Q53GD3 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.64□□□□□ -1.83
SLC44A4Q53GD3 ELOCP31-201ENST00000540463 467 ntBASIC3.64□□□□□ -1.83
SLC44A4Q53GD3 AP000763.2-201ENST00000540641 163 ntBASIC3.64□□□□□ -1.83
SLC44A4Q53GD3 AL157871.3-201ENST00000557231 293 ntBASIC3.64□□□□□ -1.83
SLC44A4Q53GD3 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.64□□□□□ -1.83
SLC44A4Q53GD3 MIR548AC-201ENST00000585049 88 ntBASIC3.64□□□□□ -1.83
SLC44A4Q53GD3 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SLC44A4Q53GD3 AC027309.3-201ENST00000623419 351 ntBASIC3.64□□□□□ -1.83
SLC44A4Q53GD3 SNORA50A-202ENST00000629536 136 ntBASIC3.64□□□□□ -1.83
SLC44A4Q53GD3 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.64□□□□□ -1.83
SLC44A4Q53GD3 AC091152.2-201ENST00000591628 2569 ntBASIC3.64□□□□□ -1.83
SLC44A4Q53GD3 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
SLC44A4Q53GD3 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.64□□□□□ -1.83
SLC44A4Q53GD3 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SLC44A4Q53GD3 ZNF807-201ENST00000328088 1707 ntBASIC3.64□□□□□ -1.83
SLC44A4Q53GD3 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.63□□□□□ -1.83
SLC44A4Q53GD3 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SLC44A4Q53GD3 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
SLC44A4Q53GD3 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
SLC44A4Q53GD3 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
SLC44A4Q53GD3 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
SLC44A4Q53GD3 U3.12-201ENST00000364498 214 ntBASIC3.63□□□□□ -1.83
SLC44A4Q53GD3 Y_RNA.339-201ENST00000365325 102 ntBASIC3.63□□□□□ -1.83
SLC44A4Q53GD3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SLC44A4Q53GD3 RNU6-1297P-201ENST00000384415 104 ntBASIC3.63□□□□□ -1.83
SLC44A4Q53GD3 Y_RNA.530-201ENST00000384587 101 ntBASIC3.63□□□□□ -1.83
SLC44A4Q53GD3 HLFP1-201ENST00000402375 499 ntBASIC3.63□□□□□ -1.83
SLC44A4Q53GD3 RNU6-1025P-201ENST00000410629 104 ntBASIC3.63□□□□□ -1.83
SLC44A4Q53GD3 MTCO2P27-201ENST00000420740 428 ntBASIC3.63□□□□□ -1.83
SLC44A4Q53GD3 RPL23AP69-201ENST00000431134 458 ntBASIC3.63□□□□□ -1.83
SLC44A4Q53GD3 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.63□□□□□ -1.83
SLC44A4Q53GD3 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.63□□□□□ -1.83
SLC44A4Q53GD3 AC087884.1-201ENST00000469738 328 ntBASIC3.63□□□□□ -1.83
SLC44A4Q53GD3 AC093663.1-201ENST00000497190 394 ntBASIC3.63□□□□□ -1.83
SLC44A4Q53GD3 MTND3P25-201ENST00000509243 135 ntBASIC3.63□□□□□ -1.83
SLC44A4Q53GD3 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.63□□□□□ -1.83
SLC44A4Q53GD3 RPL23AP94-201ENST00000512518 302 ntBASIC3.63□□□□□ -1.83
SLC44A4Q53GD3 RNU1-61P-201ENST00000516107 151 ntBASIC3.63□□□□□ -1.83
SLC44A4Q53GD3 RNU6-189P-201ENST00000516120 101 ntBASIC3.63□□□□□ -1.83
SLC44A4Q53GD3 SNORA25.17-201ENST00000517184 124 ntBASIC3.63□□□□□ -1.83
SLC44A4Q53GD3 IGHV3-76-201ENST00000522465 295 ntBASIC3.63□□□□□ -1.83
SLC44A4Q53GD3 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.63□□□□□ -1.83
SLC44A4Q53GD3 AC090115.3-201ENST00000553218 849 ntBASIC3.63□□□□□ -1.83
SLC44A4Q53GD3 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.63□□□□□ -1.83
SLC44A4Q53GD3 SNRPGP17-201ENST00000603780 214 ntBASIC3.63□□□□□ -1.83
SLC44A4Q53GD3 AL670379.10-201ENST00000604330 253 ntBASIC3.63□□□□□ -1.83
SLC44A4Q53GD3 AC080078.3-201ENST00000605407 463 ntBASIC3.63□□□□□ -1.83
SLC44A4Q53GD3 AL670379.9-201ENST00000605428 253 ntBASIC3.63□□□□□ -1.83
SLC44A4Q53GD3 AL022345.1-201ENST00000607292 135 ntBASIC3.63□□□□□ -1.83
SLC44A4Q53GD3 Z82243.1-201ENST00000609432 473 ntBASIC3.63□□□□□ -1.83
SLC44A4Q53GD3 U2.17-201ENST00000611454 95 ntBASIC3.63□□□□□ -1.83
SLC44A4Q53GD3 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.63□□□□□ -1.83
SLC44A4Q53GD3 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.63□□□□□ -1.83
SLC44A4Q53GD3 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SLC44A4Q53GD3 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms