Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC098831.1-201ENST00000440661 216 ntBASIC1.13□□□□□ -2.23
RFX7Q2KHR2 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.13□□□□□ -2.23
RFX7Q2KHR2 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC1.13□□□□□ -2.23
RFX7Q2KHR2 MTND3P4-201ENST00000453537 303 ntBASIC1.13□□□□□ -2.23
RFX7Q2KHR2 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.13□□□□□ -2.23
RFX7Q2KHR2 AC091860.1-201ENST00000505723 432 ntBASIC1.13□□□□□ -2.23
RFX7Q2KHR2 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.13□□□□□ -2.23
RFX7Q2KHR2 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.13□□□□□ -2.23
RFX7Q2KHR2 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
RFX7Q2KHR2 AC110491.1-201ENST00000562191 2010 ntBASIC1.13□□□□□ -2.23
RFX7Q2KHR2 AL359854.1-201ENST00000614203 1594 ntBASIC1.13□□□□□ -2.23
RFX7Q2KHR2 NDUFS5P4-201ENST00000412983 318 ntBASIC1.12□□□□□ -2.23
RFX7Q2KHR2 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC1.12□□□□□ -2.23
RFX7Q2KHR2 OFD1P3Y-201ENST00000453312 783 ntBASIC1.12□□□□□ -2.23
RFX7Q2KHR2 GTF2IP12-201ENST00000456547 356 ntBASIC1.12□□□□□ -2.23
RFX7Q2KHR2 XACT-201ENST00000468762 497 ntTSL 5 BASIC1.12□□□□□ -2.23
RFX7Q2KHR2 AC117503.1-201ENST00000472241 394 ntBASIC1.12□□□□□ -2.23
RFX7Q2KHR2 AC108729.2-201ENST00000476543 840 ntBASIC1.12□□□□□ -2.23
RFX7Q2KHR2 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.12□□□□□ -2.23
RFX7Q2KHR2 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.12□□□□□ -2.23
RFX7Q2KHR2 AL359212.1-201ENST00000556608 614 ntBASIC1.12□□□□□ -2.23
RFX7Q2KHR2 AC233702.2-202ENST00000562547 291 ntBASIC1.12□□□□□ -2.23
RFX7Q2KHR2 MIR98-201ENST00000606724 119 ntBASIC1.12□□□□□ -2.23
RFX7Q2KHR2 AL158211.4-201ENST00000606988 584 ntBASIC1.12□□□□□ -2.23
RFX7Q2KHR2 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.12□□□□□ -2.23
RFX7Q2KHR2 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
RFX7Q2KHR2 RNU6-883P-201ENST00000384597 107 ntBASIC1.11□□□□□ -2.23
RFX7Q2KHR2 MIR216A-201ENST00000385063 110 ntBASIC1.11□□□□□ -2.23
RFX7Q2KHR2 AC009310.1-201ENST00000414414 451 ntBASIC1.11□□□□□ -2.23
RFX7Q2KHR2 RNFT1P2-201ENST00000443064 757 ntBASIC1.11□□□□□ -2.23
RFX7Q2KHR2 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.11□□□□□ -2.23
RFX7Q2KHR2 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.11□□□□□ -2.23
RFX7Q2KHR2 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.11□□□□□ -2.23
RFX7Q2KHR2 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.11□□□□□ -2.23
RFX7Q2KHR2 RPL22P13-201ENST00000493291 347 ntBASIC1.11□□□□□ -2.23
RFX7Q2KHR2 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
RFX7Q2KHR2 CBX3P8-201ENST00000532412 525 ntBASIC1.11□□□□□ -2.23
RFX7Q2KHR2 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.11□□□□□ -2.23
RFX7Q2KHR2 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.11□□□□□ -2.23
RFX7Q2KHR2 MIR3167-201ENST00000579623 85 ntBASIC1.11□□□□□ -2.23
RFX7Q2KHR2 AC091946.2-201ENST00000606105 291 ntBASIC1.11□□□□□ -2.23
RFX7Q2KHR2 AL450270.1-201ENST00000606160 391 ntBASIC1.11□□□□□ -2.23
RFX7Q2KHR2 AC024257.5-201ENST00000612739 531 ntBASIC1.11□□□□□ -2.23
RFX7Q2KHR2 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.11□□□□□ -2.23
RFX7Q2KHR2 AL603758.1-201ENST00000618654 241 ntBASIC1.11□□□□□ -2.23
RFX7Q2KHR2 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
RFX7Q2KHR2 RNU1-133P-201ENST00000364867 167 ntBASIC1.1□□□□□ -2.23
RFX7Q2KHR2 RNU2-32P-201ENST00000411193 191 ntBASIC1.1□□□□□ -2.23
RFX7Q2KHR2 AL022400.1-201ENST00000423946 935 ntBASIC1.1□□□□□ -2.23
RFX7Q2KHR2 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.1□□□□□ -2.23
RFX7Q2KHR2 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.1□□□□□ -2.23
RFX7Q2KHR2 RNA5SP57-201ENST00000459463 123 ntBASIC1.1□□□□□ -2.23
RFX7Q2KHR2 RPL21P47-201ENST00000483696 477 ntBASIC1.1□□□□□ -2.23
RFX7Q2KHR2 RPS27AP10-201ENST00000496103 208 ntBASIC1.1□□□□□ -2.23
RFX7Q2KHR2 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC1.1□□□□□ -2.23
RFX7Q2KHR2 MTCYBP16-201ENST00000509187 1129 ntBASIC1.1□□□□□ -2.23
RFX7Q2KHR2 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.1□□□□□ -2.23
RFX7Q2KHR2 RNU6-528P-201ENST00000516926 100 ntBASIC1.1□□□□□ -2.23
RFX7Q2KHR2 CYP3A137P-201ENST00000562436 69 ntBASIC1.1□□□□□ -2.23
RFX7Q2KHR2 AC023825.1-201ENST00000566704 1030 ntBASIC1.1□□□□□ -2.23
RFX7Q2KHR2 AC090615.1-201ENST00000577519 154 ntBASIC1.1□□□□□ -2.23
RFX7Q2KHR2 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC1.1□□□□□ -2.23
RFX7Q2KHR2 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.1□□□□□ -2.23
RFX7Q2KHR2 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.1□□□□□ -2.23
RFX7Q2KHR2 AC108706.1-201ENST00000611053 297 ntBASIC1.1□□□□□ -2.23
RFX7Q2KHR2 MIR6857-201ENST00000613267 93 ntBASIC1.1□□□□□ -2.23
RFX7Q2KHR2 SNORA25.8-201ENST00000364831 128 ntBASIC1.09□□□□□ -2.23
RFX7Q2KHR2 RNU6-1222P-201ENST00000384615 107 ntBASIC1.09□□□□□ -2.23
RFX7Q2KHR2 RPL37P10-201ENST00000412884 288 ntBASIC1.09□□□□□ -2.23
RFX7Q2KHR2 AL592310.1-201ENST00000414330 671 ntBASIC1.09□□□□□ -2.23
RFX7Q2KHR2 CR848007.2-201ENST00000424918 787 ntBASIC1.09□□□□□ -2.23
RFX7Q2KHR2 UBE2V1P4-201ENST00000425374 344 ntBASIC1.09□□□□□ -2.23
RFX7Q2KHR2 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.09□□□□□ -2.23
RFX7Q2KHR2 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.09□□□□□ -2.23
RFX7Q2KHR2 AL160314.1-201ENST00000490836 438 ntBASIC1.09□□□□□ -2.23
RFX7Q2KHR2 RNA5SP384-201ENST00000516615 116 ntBASIC1.09□□□□□ -2.23
RFX7Q2KHR2 RNU6-405P-201ENST00000516637 110 ntBASIC1.09□□□□□ -2.23
RFX7Q2KHR2 SNORD19.2-201ENST00000516978 73 ntBASIC1.09□□□□□ -2.23
RFX7Q2KHR2 RNU6-467P-201ENST00000517027 110 ntBASIC1.09□□□□□ -2.23
RFX7Q2KHR2 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.09□□□□□ -2.23
RFX7Q2KHR2 CR383656.8-201ENST00000549046 145 ntBASIC1.09□□□□□ -2.23
RFX7Q2KHR2 SUB1P4-201ENST00000566062 339 ntBASIC1.09□□□□□ -2.23
RFX7Q2KHR2 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.09□□□□□ -2.23
RFX7Q2KHR2 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.09□□□□□ -2.23
RFX7Q2KHR2 FAM71BP1-201ENST00000604431 523 ntBASIC1.09□□□□□ -2.23
RFX7Q2KHR2 AP001485.1-201ENST00000604799 199 ntBASIC1.09□□□□□ -2.23
RFX7Q2KHR2 AL020996.3-201ENST00000606617 222 ntBASIC1.09□□□□□ -2.23
RFX7Q2KHR2 AL355802.3-201ENST00000607571 545 ntBASIC1.09□□□□□ -2.23
RFX7Q2KHR2 AC239868.4-201ENST00000608318 671 ntBASIC1.09□□□□□ -2.23
RFX7Q2KHR2 AC009974.1-201ENST00000608881 455 ntBASIC1.09□□□□□ -2.23
RFX7Q2KHR2 AC104820.1-201ENST00000624183 307 ntBASIC1.09□□□□□ -2.23
RFX7Q2KHR2 DDX43P2-201ENST00000604753 1354 ntBASIC1.09□□□□□ -2.23
RFX7Q2KHR2 MIR424-201ENST00000362227 98 ntBASIC1.08□□□□□ -2.24
RFX7Q2KHR2 RNU5E-8P-201ENST00000363502 116 ntBASIC1.08□□□□□ -2.24
RFX7Q2KHR2 MRPL35P3-201ENST00000421557 364 ntBASIC1.08□□□□□ -2.24
RFX7Q2KHR2 CST2P1-201ENST00000425770 87 ntBASIC1.08□□□□□ -2.24
RFX7Q2KHR2 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.08□□□□□ -2.24
RFX7Q2KHR2 AL590365.1-201ENST00000450788 243 ntBASIC1.08□□□□□ -2.24
RFX7Q2KHR2 RNU7-140P-201ENST00000459546 60 ntBASIC1.08□□□□□ -2.24
RFX7Q2KHR2 AC139453.3-201ENST00000493276 369 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms