Protein–RNA interactions for Protein: Q15651

HMGN3, High mobility group nucleosome-binding domain-containing protein 3, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3Q15651 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC0.36□□□□□ -2.35
HMGN3Q15651 AC090079.2-201ENST00000575289 768 ntBASIC0.36□□□□□ -2.35
HMGN3Q15651 AL022345.2-201ENST00000606307 135 ntBASIC0.36□□□□□ -2.35
HMGN3Q15651 AC016252.1-201ENST00000609721 474 ntBASIC0.36□□□□□ -2.35
HMGN3Q15651 MIR8065-201ENST00000620577 100 ntBASIC0.36□□□□□ -2.35
HMGN3Q15651 AP003400.6-201ENST00000624698 740 ntBASIC0.36□□□□□ -2.35
HMGN3Q15651 OR4G3P-201ENST00000633500 913 ntBASIC0.36□□□□□ -2.35
HMGN3Q15651 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.36□□□□□ -2.35
HMGN3Q15651 AL442644.1-201ENST00000454390 3105 ntBASIC0.35□□□□□ -2.35
HMGN3Q15651 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
HMGN3Q15651 RNA5SP432-201ENST00000362480 116 ntBASIC0.35□□□□□ -2.35
HMGN3Q15651 SNORA25-201ENST00000384384 134 ntBASIC0.35□□□□□ -2.35
HMGN3Q15651 MIR10B-201ENST00000385011 110 ntBASIC0.35□□□□□ -2.35
HMGN3Q15651 SNORA48.1-201ENST00000390879 135 ntBASIC0.35□□□□□ -2.35
HMGN3Q15651 RNU6-233P-201ENST00000410845 141 ntBASIC0.35□□□□□ -2.35
HMGN3Q15651 RPS26P5-201ENST00000418544 335 ntBASIC0.35□□□□□ -2.35
HMGN3Q15651 AC114737.2-201ENST00000421583 173 ntBASIC0.35□□□□□ -2.35
HMGN3Q15651 BEND7P1-201ENST00000422058 457 ntBASIC0.35□□□□□ -2.35
HMGN3Q15651 MTCYBP32-201ENST00000427945 1084 ntBASIC0.35□□□□□ -2.35
HMGN3Q15651 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.35□□□□□ -2.35
HMGN3Q15651 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.35□□□□□ -2.35
HMGN3Q15651 RPL31P3-201ENST00000458430 332 ntBASIC0.35□□□□□ -2.35
HMGN3Q15651 MEMO1P3-201ENST00000459811 302 ntBASIC0.35□□□□□ -2.35
HMGN3Q15651 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.35□□□□□ -2.35
HMGN3Q15651 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC0.35□□□□□ -2.35
HMGN3Q15651 VN1R82P-201ENST00000601481 356 ntBASIC0.35□□□□□ -2.35
HMGN3Q15651 AC091152.3-201ENST00000604227 325 ntBASIC0.35□□□□□ -2.35
HMGN3Q15651 AC112220.3-201ENST00000605502 502 ntBASIC0.35□□□□□ -2.35
HMGN3Q15651 AL022345.1-201ENST00000607292 135 ntBASIC0.35□□□□□ -2.35
HMGN3Q15651 AC009229.3-201ENST00000608056 282 ntBASIC0.35□□□□□ -2.35
HMGN3Q15651 AC040896.1-201ENST00000613819 479 ntBASIC0.35□□□□□ -2.35
HMGN3Q15651 MIR8070-201ENST00000616510 88 ntBASIC0.35□□□□□ -2.35
HMGN3Q15651 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.35□□□□□ -2.35
HMGN3Q15651 MTND5P11-201ENST00000511037 1812 ntBASIC0.35□□□□□ -2.35
HMGN3Q15651 AC092125.1-201ENST00000562568 1995 ntBASIC0.34□□□□□ -2.35
HMGN3Q15651 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
HMGN3Q15651 RNU1-58P-201ENST00000362413 163 ntBASIC0.34□□□□□ -2.36
HMGN3Q15651 RNA5SP347-201ENST00000362445 119 ntBASIC0.34□□□□□ -2.36
HMGN3Q15651 RNU6-942P-201ENST00000363002 107 ntBASIC0.34□□□□□ -2.36
HMGN3Q15651 Y_RNA.191-201ENST00000363972 113 ntBASIC0.34□□□□□ -2.36
HMGN3Q15651 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
HMGN3Q15651 RNU2-15P-201ENST00000410692 191 ntBASIC0.34□□□□□ -2.36
HMGN3Q15651 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.34□□□□□ -2.36
HMGN3Q15651 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.34□□□□□ -2.36
HMGN3Q15651 AC092634.6-201ENST00000418558 192 ntBASIC0.34□□□□□ -2.36
HMGN3Q15651 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.34□□□□□ -2.36
HMGN3Q15651 NCOR1P3-201ENST00000420479 303 ntBASIC0.34□□□□□ -2.36
HMGN3Q15651 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.34□□□□□ -2.36
HMGN3Q15651 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.34□□□□□ -2.36
HMGN3Q15651 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC0.34□□□□□ -2.36
HMGN3Q15651 SNORD19.2-201ENST00000516978 73 ntBASIC0.34□□□□□ -2.36
HMGN3Q15651 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.34□□□□□ -2.36
HMGN3Q15651 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
HMGN3Q15651 AP003066.2-201ENST00000529375 555 ntBASIC0.34□□□□□ -2.36
HMGN3Q15651 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.34□□□□□ -2.36
HMGN3Q15651 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC0.34□□□□□ -2.36
HMGN3Q15651 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC0.34□□□□□ -2.36
HMGN3Q15651 MTCO2P2-201ENST00000591258 225 ntBASIC0.34□□□□□ -2.36
HMGN3Q15651 AC016727.2-201ENST00000603988 621 ntBASIC0.34□□□□□ -2.36
HMGN3Q15651 AC016542.1-201ENST00000608259 493 ntBASIC0.34□□□□□ -2.36
HMGN3Q15651 MIR6788-201ENST00000618842 66 ntBASIC0.34□□□□□ -2.36
HMGN3Q15651 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.34□□□□□ -2.36
HMGN3Q15651 AL359740.1-201ENST00000624340 592 ntBASIC0.34□□□□□ -2.36
HMGN3Q15651 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.34□□□□□ -2.36
HMGN3Q15651 AC095038.3-201ENST00000634439 195 ntBASIC0.34□□□□□ -2.36
HMGN3Q15651 AC017104.5-201ENST00000637647 639 ntBASIC0.34□□□□□ -2.36
HMGN3Q15651 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.34□□□□□ -2.36
HMGN3Q15651 DDX43P2-201ENST00000604753 1354 ntBASIC0.33□□□□□ -2.36
HMGN3Q15651 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
HMGN3Q15651 RNU6-386P-201ENST00000362650 107 ntBASIC0.33□□□□□ -2.36
HMGN3Q15651 RNU6-1164P-201ENST00000364428 107 ntBASIC0.33□□□□□ -2.36
HMGN3Q15651 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
HMGN3Q15651 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
HMGN3Q15651 SNORD14D-201ENST00000384390 87 ntBASIC0.33□□□□□ -2.36
HMGN3Q15651 MIR608-201ENST00000384820 100 ntBASIC0.33□□□□□ -2.36
HMGN3Q15651 MIR605-201ENST00000385078 83 ntBASIC0.33□□□□□ -2.36
HMGN3Q15651 Z86062.1-201ENST00000406773 777 ntBASIC0.33□□□□□ -2.36
HMGN3Q15651 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.33□□□□□ -2.36
HMGN3Q15651 AC139712.2-201ENST00000424302 339 ntBASIC0.33□□□□□ -2.36
HMGN3Q15651 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC0.33□□□□□ -2.36
HMGN3Q15651 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.33□□□□□ -2.36
HMGN3Q15651 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.33□□□□□ -2.36
HMGN3Q15651 RPL36AP48-201ENST00000485521 314 ntBASIC0.33□□□□□ -2.36
HMGN3Q15651 AC134050.1-201ENST00000495088 933 ntBASIC0.33□□□□□ -2.36
HMGN3Q15651 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.33□□□□□ -2.36
HMGN3Q15651 AC022483.1-201ENST00000514020 567 ntBASIC0.33□□□□□ -2.36
HMGN3Q15651 RNA5SP291-201ENST00000517222 105 ntBASIC0.33□□□□□ -2.36
HMGN3Q15651 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.33□□□□□ -2.36
HMGN3Q15651 ADAM3B-201ENST00000569937 840 ntBASIC0.33□□□□□ -2.36
HMGN3Q15651 AP000860.1-201ENST00000605250 559 ntBASIC0.33□□□□□ -2.36
HMGN3Q15651 NDUFA8P1-201ENST00000605525 367 ntBASIC0.33□□□□□ -2.36
HMGN3Q15651 AL109620.1-201ENST00000618738 1197 ntBASIC0.33□□□□□ -2.36
HMGN3Q15651 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC0.33□□□□□ -2.36
HMGN3Q15651 AC009033.1-201ENST00000624279 431 ntBASIC0.33□□□□□ -2.36
HMGN3Q15651 RPL23AP32-201ENST00000395315 459 ntBASIC0.32□□□□□ -2.36
HMGN3Q15651 MRPL35P1-201ENST00000404272 572 ntBASIC0.32□□□□□ -2.36
HMGN3Q15651 AL139397.2-201ENST00000404529 772 ntBASIC0.32□□□□□ -2.36
HMGN3Q15651 MIR548J-201ENST00000408833 112 ntBASIC0.32□□□□□ -2.36
HMGN3Q15651 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.32□□□□□ -2.36
HMGN3Q15651 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 161.9 ms