Protein–RNA interactions for Protein: Q10570

CPSF1, Cleavage and polyadenylation specificity factor subunit 1, humanhuman

Known RBP Predictions only

Length 1,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1Q10570 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.81□□□□□ -2.28
CPSF1Q10570 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.81□□□□□ -2.28
CPSF1Q10570 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.81□□□□□ -2.28
CPSF1Q10570 AP003072.2-201ENST00000527756 676 ntBASIC0.81□□□□□ -2.28
CPSF1Q10570 AC019288.1-201ENST00000557918 224 ntBASIC0.81□□□□□ -2.28
CPSF1Q10570 AC138473.1-201ENST00000605717 526 ntBASIC0.81□□□□□ -2.28
CPSF1Q10570 MIR8087-201ENST00000612745 78 ntBASIC0.81□□□□□ -2.28
CPSF1Q10570 U1.36-201ENST00000620684 176 ntBASIC0.81□□□□□ -2.28
CPSF1Q10570 ELL2P3-201ENST00000457883 1602 ntBASIC0.81□□□□□ -2.28
CPSF1Q10570 RNU6-1339P-201ENST00000363574 91 ntBASIC0.81□□□□□ -2.28
CPSF1Q10570 SNORA25B-201ENST00000365507 128 ntBASIC0.81□□□□□ -2.28
CPSF1Q10570 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.81□□□□□ -2.28
CPSF1Q10570 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC0.81□□□□□ -2.28
CPSF1Q10570 AL161788.1-201ENST00000441805 169 ntBASIC0.81□□□□□ -2.28
CPSF1Q10570 MTND2P24-201ENST00000453434 806 ntBASIC0.81□□□□□ -2.28
CPSF1Q10570 AL049874.1-201ENST00000489560 388 ntBASIC0.81□□□□□ -2.28
CPSF1Q10570 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC0.81□□□□□ -2.28
CPSF1Q10570 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC0.81□□□□□ -2.28
CPSF1Q10570 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.81□□□□□ -2.28
CPSF1Q10570 BX322635.1-201ENST00000605804 496 ntBASIC0.81□□□□□ -2.28
CPSF1Q10570 AL109933.3-201ENST00000619095 188 ntBASIC0.81□□□□□ -2.28
CPSF1Q10570 AL118508.4-201ENST00000624142 1176 ntBASIC0.81□□□□□ -2.28
CPSF1Q10570 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC0.81□□□□□ -2.28
CPSF1Q10570 RNA5SP257-201ENST00000363023 116 ntBASIC0.8□□□□□ -2.28
CPSF1Q10570 SNORA70.7-201ENST00000384159 133 ntBASIC0.8□□□□□ -2.28
CPSF1Q10570 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC0.8□□□□□ -2.28
CPSF1Q10570 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.8□□□□□ -2.28
CPSF1Q10570 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC0.8□□□□□ -2.28
CPSF1Q10570 AC098831.1-201ENST00000440661 216 ntBASIC0.8□□□□□ -2.28
CPSF1Q10570 PRPS1P1-201ENST00000445305 876 ntBASIC0.8□□□□□ -2.28
CPSF1Q10570 ARPC3P5-201ENST00000448802 534 ntBASIC0.8□□□□□ -2.28
CPSF1Q10570 UBL5P1-201ENST00000507979 193 ntBASIC0.8□□□□□ -2.28
CPSF1Q10570 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC0.8□□□□□ -2.28
CPSF1Q10570 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.8□□□□□ -2.28
CPSF1Q10570 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC0.8□□□□□ -2.28
CPSF1Q10570 SULT1C2P1-202ENST00000562418 459 ntBASIC0.8□□□□□ -2.28
CPSF1Q10570 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC0.8□□□□□ -2.28
CPSF1Q10570 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.8□□□□□ -2.28
CPSF1Q10570 AC006270.3-201ENST00000605967 1036 ntBASIC0.8□□□□□ -2.28
CPSF1Q10570 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.8□□□□□ -2.28
CPSF1Q10570 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC0.8□□□□□ -2.28
CPSF1Q10570 RNU6-492P-201ENST00000363035 104 ntBASIC0.79□□□□□ -2.28
CPSF1Q10570 RNU6-741P-201ENST00000383889 107 ntBASIC0.79□□□□□ -2.28
CPSF1Q10570 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
CPSF1Q10570 AC098934.3-201ENST00000430450 190 ntBASIC0.79□□□□□ -2.28
CPSF1Q10570 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC0.79□□□□□ -2.28
CPSF1Q10570 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.79□□□□□ -2.28
CPSF1Q10570 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.79□□□□□ -2.28
CPSF1Q10570 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.79□□□□□ -2.28
CPSF1Q10570 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.79□□□□□ -2.28
CPSF1Q10570 AC105313.1-201ENST00000509121 353 ntBASIC0.79□□□□□ -2.28
CPSF1Q10570 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC0.79□□□□□ -2.28
CPSF1Q10570 AC093677.1-201ENST00000514414 678 ntBASIC0.79□□□□□ -2.28
CPSF1Q10570 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC0.79□□□□□ -2.28
CPSF1Q10570 AC104229.1-201ENST00000561364 255 ntBASIC0.79□□□□□ -2.28
CPSF1Q10570 AC093510.2-201ENST00000562820 896 ntBASIC0.79□□□□□ -2.28
CPSF1Q10570 SNORD39.3-201ENST00000584451 71 ntBASIC0.79□□□□□ -2.28
CPSF1Q10570 AC009229.3-201ENST00000608056 282 ntBASIC0.79□□□□□ -2.28
CPSF1Q10570 AC110491.1-201ENST00000562191 2010 ntBASIC0.78□□□□□ -2.28
CPSF1Q10570 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.78□□□□□ -2.28
CPSF1Q10570 MIR95-201ENST00000385072 81 ntBASIC0.78□□□□□ -2.28
CPSF1Q10570 MIR1283-2-201ENST00000408621 87 ntBASIC0.78□□□□□ -2.28
CPSF1Q10570 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.78□□□□□ -2.28
CPSF1Q10570 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC0.78□□□□□ -2.28
CPSF1Q10570 CR769776.1-201ENST00000441254 787 ntBASIC0.78□□□□□ -2.28
CPSF1Q10570 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.78□□□□□ -2.28
CPSF1Q10570 AC112492.4-201ENST00000456549 352 ntBASIC0.78□□□□□ -2.28
CPSF1Q10570 RNU6-775P-201ENST00000459318 96 ntBASIC0.78□□□□□ -2.28
CPSF1Q10570 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.78□□□□□ -2.28
CPSF1Q10570 SNORA31.22-201ENST00000517204 135 ntBASIC0.78□□□□□ -2.28
CPSF1Q10570 AP003484.1-201ENST00000530974 250 ntBASIC0.78□□□□□ -2.28
CPSF1Q10570 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.78□□□□□ -2.28
CPSF1Q10570 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.78□□□□□ -2.28
CPSF1Q10570 AC136932.1-201ENST00000574771 208 ntBASIC0.78□□□□□ -2.28
CPSF1Q10570 GAS5-AS1-201ENST00000602767 694 ntBASIC0.78□□□□□ -2.28
CPSF1Q10570 AC010900.2-201ENST00000604508 210 ntBASIC0.78□□□□□ -2.28
CPSF1Q10570 AL359314.1-201ENST00000616913 261 ntBASIC0.78□□□□□ -2.28
CPSF1Q10570 AC012676.2-201ENST00000619258 186 ntBASIC0.78□□□□□ -2.28
CPSF1Q10570 AC004808.1-201ENST00000627671 721 ntBASIC0.78□□□□□ -2.28
CPSF1Q10570 GDI2P1-201ENST00000429312 1336 ntBASIC0.77□□□□□ -2.29
CPSF1Q10570 ZNF680P1-201ENST00000436625 1469 ntBASIC0.77□□□□□ -2.29
CPSF1Q10570 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
CPSF1Q10570 ENSAP3-201ENST00000312710 333 ntBASIC0.77□□□□□ -2.29
CPSF1Q10570 RNU6-152P-201ENST00000384037 107 ntBASIC0.77□□□□□ -2.29
CPSF1Q10570 MIR518D-201ENST00000385014 87 ntBASIC0.77□□□□□ -2.29
CPSF1Q10570 PNRC2P1-201ENST00000423940 420 ntBASIC0.77□□□□□ -2.29
CPSF1Q10570 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.77□□□□□ -2.29
CPSF1Q10570 MTCO1P53-201ENST00000441633 699 ntBASIC0.77□□□□□ -2.29
CPSF1Q10570 MTCO3P2-201ENST00000457365 171 ntBASIC0.77□□□□□ -2.29
CPSF1Q10570 RNU6-902P-201ENST00000517212 91 ntBASIC0.77□□□□□ -2.29
CPSF1Q10570 RNA5SP291-201ENST00000517222 105 ntBASIC0.77□□□□□ -2.29
CPSF1Q10570 OR5B19P-201ENST00000531766 928 ntBASIC0.77□□□□□ -2.29
CPSF1Q10570 NACAP3-201ENST00000552100 481 ntBASIC0.77□□□□□ -2.29
CPSF1Q10570 AL359212.1-201ENST00000556608 614 ntBASIC0.77□□□□□ -2.29
CPSF1Q10570 AC005668.1-201ENST00000571142 476 ntBASIC0.77□□□□□ -2.29
CPSF1Q10570 AC005261.5-201ENST00000596280 355 ntBASIC0.77□□□□□ -2.29
CPSF1Q10570 SNRPGP17-201ENST00000603780 214 ntBASIC0.77□□□□□ -2.29
CPSF1Q10570 AC087045.1-201ENST00000605856 382 ntBASIC0.77□□□□□ -2.29
CPSF1Q10570 AC007490.1-201ENST00000624321 703 ntBASIC0.77□□□□□ -2.29
CPSF1Q10570 AC009950.2-201ENST00000636548 183 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms