Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
GABPAQ06546 RNU1-138P-201ENST00000384093 164 ntBASIC2.55□□□□□ -2
GABPAQ06546 Y_RNA.534-201ENST00000384599 112 ntBASIC2.55□□□□□ -2
GABPAQ06546 SNORA48.3-201ENST00000391081 134 ntBASIC2.55□□□□□ -2
GABPAQ06546 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.55□□□□□ -2
GABPAQ06546 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.55□□□□□ -2
GABPAQ06546 RNU2-2P-201ENST00000410396 191 ntBASIC2.55□□□□□ -2
GABPAQ06546 RPL31P35-201ENST00000431058 377 ntBASIC2.55□□□□□ -2
GABPAQ06546 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.55□□□□□ -2
GABPAQ06546 USP9YP29-201ENST00000445112 563 ntBASIC2.55□□□□□ -2
GABPAQ06546 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.55□□□□□ -2
GABPAQ06546 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.55□□□□□ -2
GABPAQ06546 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.55□□□□□ -2
GABPAQ06546 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.55□□□□□ -2
GABPAQ06546 ADAM3A-203ENST00000461344 2157 ntBASIC2.55□□□□□ -2
GABPAQ06546 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.55□□□□□ -2
GABPAQ06546 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.55□□□□□ -2
GABPAQ06546 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.55□□□□□ -2
GABPAQ06546 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.55□□□□□ -2
GABPAQ06546 AC108078.2-201ENST00000510750 236 ntBASIC2.55□□□□□ -2
GABPAQ06546 HSPE1P18-201ENST00000517602 280 ntBASIC2.55□□□□□ -2
GABPAQ06546 AC026241.1-201ENST00000517873 2142 ntBASIC2.55□□□□□ -2
GABPAQ06546 AC025755.1-201ENST00000521306 278 ntBASIC2.55□□□□□ -2
GABPAQ06546 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.55□□□□□ -2
GABPAQ06546 NRBF2P1-201ENST00000587407 859 ntBASIC2.55□□□□□ -2
GABPAQ06546 AC110760.3-201ENST00000598794 467 ntBASIC2.55□□□□□ -2
GABPAQ06546 AC064872.1-201ENST00000604823 1072 ntBASIC2.55□□□□□ -2
GABPAQ06546 AC087752.4-201ENST00000605911 462 ntBASIC2.55□□□□□ -2
GABPAQ06546 U2.15-201ENST00000611544 191 ntBASIC2.55□□□□□ -2
GABPAQ06546 U2.16-201ENST00000613119 191 ntBASIC2.55□□□□□ -2
GABPAQ06546 U2.12-201ENST00000613778 191 ntBASIC2.55□□□□□ -2
GABPAQ06546 U2.20-201ENST00000613956 192 ntBASIC2.55□□□□□ -2
GABPAQ06546 U2.9-201ENST00000615427 191 ntBASIC2.55□□□□□ -2
GABPAQ06546 U2.11-201ENST00000616345 191 ntBASIC2.55□□□□□ -2
GABPAQ06546 U2.2-201ENST00000616535 191 ntBASIC2.55□□□□□ -2
GABPAQ06546 U2.3-201ENST00000617785 191 ntBASIC2.55□□□□□ -2
GABPAQ06546 U2.19-201ENST00000618602 191 ntBASIC2.55□□□□□ -2
GABPAQ06546 RNU2-1-201ENST00000618664 191 ntBASIC2.55□□□□□ -2
GABPAQ06546 U2.6-201ENST00000619225 191 ntBASIC2.55□□□□□ -2
GABPAQ06546 U2.5-201ENST00000619465 191 ntBASIC2.55□□□□□ -2
GABPAQ06546 U2.10-201ENST00000620268 191 ntBASIC2.55□□□□□ -2
GABPAQ06546 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.54□□□□□ -2
GABPAQ06546 ZNF519P1-201ENST00000449011 1626 ntBASIC2.54□□□□□ -2
GABPAQ06546 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
GABPAQ06546 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
GABPAQ06546 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
GABPAQ06546 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.54□□□□□ -2
GABPAQ06546 SNORA24.1-201ENST00000384401 135 ntBASIC2.54□□□□□ -2
GABPAQ06546 RNU6-750P-201ENST00000390946 107 ntBASIC2.54□□□□□ -2
GABPAQ06546 MIR1289-2-201ENST00000408360 111 ntBASIC2.54□□□□□ -2
GABPAQ06546 RNU6-248P-201ENST00000410720 107 ntBASIC2.54□□□□□ -2
GABPAQ06546 RNU2-25P-201ENST00000411041 191 ntBASIC2.54□□□□□ -2
GABPAQ06546 C1DP2-201ENST00000418167 426 ntBASIC2.54□□□□□ -2
GABPAQ06546 AL109913.1-201ENST00000421173 514 ntBASIC2.54□□□□□ -2
GABPAQ06546 AC098614.2-201ENST00000426040 255 ntBASIC2.54□□□□□ -2
GABPAQ06546 AC098831.1-201ENST00000440661 216 ntBASIC2.54□□□□□ -2
GABPAQ06546 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.54□□□□□ -2
GABPAQ06546 MTATP6P7-201ENST00000453315 681 ntBASIC2.54□□□□□ -2
GABPAQ06546 RNU6-956P-201ENST00000458868 103 ntBASIC2.54□□□□□ -2
GABPAQ06546 AC109927.2-201ENST00000506416 303 ntBASIC2.54□□□□□ -2
GABPAQ06546 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.54□□□□□ -2
GABPAQ06546 AC107222.1-201ENST00000510899 637 ntBASIC2.54□□□□□ -2
GABPAQ06546 AC113155.1-201ENST00000511141 769 ntBASIC2.54□□□□□ -2
GABPAQ06546 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.54□□□□□ -2
GABPAQ06546 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.54□□□□□ -2
GABPAQ06546 AC084851.1-201ENST00000529105 249 ntBASIC2.54□□□□□ -2
GABPAQ06546 ADI1P3-201ENST00000549509 470 ntBASIC2.54□□□□□ -2
GABPAQ06546 AC021739.1-201ENST00000559631 174 ntBASIC2.54□□□□□ -2
GABPAQ06546 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.54□□□□□ -2
GABPAQ06546 AL121992.2-201ENST00000606262 256 ntBASIC2.54□□□□□ -2
GABPAQ06546 AL359547.2-201ENST00000615810 418 ntBASIC2.54□□□□□ -2
GABPAQ06546 AP006437.1-201ENST00000641440 3685 ntBASIC2.54□□□□□ -2
GABPAQ06546 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
GABPAQ06546 AC010889.1-201ENST00000566193 2666 ntBASIC2.53□□□□□ -2
GABPAQ06546 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
GABPAQ06546 Y_RNA.22-201ENST00000362492 102 ntBASIC2.53□□□□□ -2
GABPAQ06546 SNORD116-2-201ENST00000384274 95 ntBASIC2.53□□□□□ -2
GABPAQ06546 SNORD116-6-201ENST00000384711 96 ntBASIC2.53□□□□□ -2
GABPAQ06546 AL356057.2-201ENST00000403318 432 ntBASIC2.53□□□□□ -2
GABPAQ06546 SNORA11.4-201ENST00000408823 129 ntBASIC2.53□□□□□ -2
GABPAQ06546 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.53□□□□□ -2
GABPAQ06546 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.53□□□□□ -2
GABPAQ06546 AL591704.1-201ENST00000432574 275 ntBASIC2.53□□□□□ -2
GABPAQ06546 HMGN2P3-201ENST00000433603 273 ntBASIC2.53□□□□□ -2
GABPAQ06546 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.53□□□□□ -2
GABPAQ06546 AL353706.1-201ENST00000436728 494 ntBASIC2.53□□□□□ -2
GABPAQ06546 HMGN2P5-201ENST00000436882 273 ntBASIC2.53□□□□□ -2
GABPAQ06546 BRK1P2-201ENST00000442875 223 ntBASIC2.53□□□□□ -2
GABPAQ06546 FTH1P25-201ENST00000447665 469 ntBASIC2.53□□□□□ -2
GABPAQ06546 DPPA3P1-201ENST00000448050 469 ntBASIC2.53□□□□□ -2
GABPAQ06546 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.53□□□□□ -2
GABPAQ06546 AC233279.1-201ENST00000455300 423 ntBASIC2.53□□□□□ -2
GABPAQ06546 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.53□□□□□ -2
GABPAQ06546 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.53□□□□□ -2
GABPAQ06546 RNU6-123P-201ENST00000516163 102 ntBASIC2.53□□□□□ -2
GABPAQ06546 RPPH1-2P-201ENST00000516688 293 ntBASIC2.53□□□□□ -2
GABPAQ06546 RNU6-572P-201ENST00000516724 80 ntBASIC2.53□□□□□ -2
GABPAQ06546 RNU6-1315P-201ENST00000517187 99 ntBASIC2.53□□□□□ -2
GABPAQ06546 AC090572.1-201ENST00000519251 160 ntBASIC2.53□□□□□ -2
GABPAQ06546 AP000889.2-201ENST00000532684 490 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms