Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.19□□□□□ -2.22
H3F3AP84243 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.19□□□□□ -2.22
H3F3AP84243 AC097460.3-201ENST00000623099 442 ntBASIC1.19□□□□□ -2.22
H3F3AP84243 MTND4P21-201ENST00000453886 1357 ntBASIC1.19□□□□□ -2.22
H3F3AP84243 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
H3F3AP84243 MIR378A-201ENST00000362177 66 ntBASIC1.18□□□□□ -2.22
H3F3AP84243 RNU6-203P-201ENST00000384038 104 ntBASIC1.18□□□□□ -2.22
H3F3AP84243 RPL30P13-201ENST00000418873 348 ntBASIC1.18□□□□□ -2.22
H3F3AP84243 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.18□□□□□ -2.22
H3F3AP84243 MTCO3P43-201ENST00000440974 771 ntBASIC1.18□□□□□ -2.22
H3F3AP84243 AL158053.1-201ENST00000441503 453 ntBASIC1.18□□□□□ -2.22
H3F3AP84243 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.18□□□□□ -2.22
H3F3AP84243 AC079776.3-201ENST00000450665 370 ntBASIC1.18□□□□□ -2.22
H3F3AP84243 HSPE1P24-201ENST00000450782 238 ntBASIC1.18□□□□□ -2.22
H3F3AP84243 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.18□□□□□ -2.22
H3F3AP84243 RNU1-123P-201ENST00000458950 160 ntBASIC1.18□□□□□ -2.22
H3F3AP84243 AC005908.1-201ENST00000468701 347 ntBASIC1.18□□□□□ -2.22
H3F3AP84243 MTCYBP35-201ENST00000503630 1137 ntBASIC1.18□□□□□ -2.22
H3F3AP84243 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.18□□□□□ -2.22
H3F3AP84243 AP000763.2-201ENST00000540641 163 ntBASIC1.18□□□□□ -2.22
H3F3AP84243 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.18□□□□□ -2.22
H3F3AP84243 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.18□□□□□ -2.22
H3F3AP84243 SUB1P3-201ENST00000564581 315 ntBASIC1.18□□□□□ -2.22
H3F3AP84243 AC079148.1-201ENST00000565944 819 ntBASIC1.18□□□□□ -2.22
H3F3AP84243 MIR3660-201ENST00000584845 100 ntBASIC1.18□□□□□ -2.22
H3F3AP84243 AC021171.1-201ENST00000603137 706 ntBASIC1.18□□□□□ -2.22
H3F3AP84243 CYP2C61P-201ENST00000604072 290 ntBASIC1.18□□□□□ -2.22
H3F3AP84243 MIR6134-201ENST00000617606 109 ntBASIC1.18□□□□□ -2.22
H3F3AP84243 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
H3F3AP84243 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.17□□□□□ -2.22
H3F3AP84243 MIR26B-201ENST00000362251 77 ntBASIC1.17□□□□□ -2.22
H3F3AP84243 Y_RNA.67-201ENST00000362870 100 ntBASIC1.17□□□□□ -2.22
H3F3AP84243 SNORD14D-201ENST00000384390 87 ntBASIC1.17□□□□□ -2.22
H3F3AP84243 AL590084.1-201ENST00000407885 387 ntBASIC1.17□□□□□ -2.22
H3F3AP84243 RPL21P24-201ENST00000413752 448 ntBASIC1.17□□□□□ -2.22
H3F3AP84243 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.17□□□□□ -2.22
H3F3AP84243 AC104651.1-201ENST00000427559 735 ntBASIC1.17□□□□□ -2.22
H3F3AP84243 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.17□□□□□ -2.22
H3F3AP84243 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.17□□□□□ -2.22
H3F3AP84243 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.17□□□□□ -2.22
H3F3AP84243 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.17□□□□□ -2.22
H3F3AP84243 RPS29P29-201ENST00000456396 171 ntBASIC1.17□□□□□ -2.22
H3F3AP84243 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.17□□□□□ -2.22
H3F3AP84243 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.17□□□□□ -2.22
H3F3AP84243 AC023194.1-201ENST00000493084 308 ntBASIC1.17□□□□□ -2.22
H3F3AP84243 AC109927.2-201ENST00000506416 303 ntBASIC1.17□□□□□ -2.22
H3F3AP84243 MTCYBP43-201ENST00000513621 740 ntBASIC1.17□□□□□ -2.22
H3F3AP84243 AC093012.1-202ENST00000549403 582 ntBASIC1.17□□□□□ -2.22
H3F3AP84243 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.17□□□□□ -2.22
H3F3AP84243 AC068338.1-201ENST00000565567 176 ntBASIC1.17□□□□□ -2.22
H3F3AP84243 VN1R80P-201ENST00000597126 338 ntBASIC1.17□□□□□ -2.22
H3F3AP84243 AC107952.2-201ENST00000606048 486 ntBASIC1.17□□□□□ -2.22
H3F3AP84243 uc_338.12-201ENST00000616344 181 ntBASIC1.17□□□□□ -2.22
H3F3AP84243 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.17□□□□□ -2.22
H3F3AP84243 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
H3F3AP84243 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.17□□□□□ -2.22
H3F3AP84243 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.16□□□□□ -2.22
H3F3AP84243 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.16□□□□□ -2.22
H3F3AP84243 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
H3F3AP84243 SNORA7.1-201ENST00000363750 139 ntBASIC1.16□□□□□ -2.22
H3F3AP84243 RNU6-439P-201ENST00000384188 106 ntBASIC1.16□□□□□ -2.22
H3F3AP84243 SNORA40.6-201ENST00000391153 128 ntBASIC1.16□□□□□ -2.22
H3F3AP84243 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.16□□□□□ -2.22
H3F3AP84243 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.16□□□□□ -2.22
H3F3AP84243 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.16□□□□□ -2.22
H3F3AP84243 AC015922.2-201ENST00000435593 184 ntBASIC1.16□□□□□ -2.22
H3F3AP84243 AL121601.2-201ENST00000438019 707 ntBASIC1.16□□□□□ -2.22
H3F3AP84243 PTENP1-201ENST00000447117 1215 ntBASIC1.16□□□□□ -2.22
H3F3AP84243 AC009474.2-201ENST00000451383 136 ntBASIC1.16□□□□□ -2.22
H3F3AP84243 TPRKBP1-201ENST00000456243 481 ntBASIC1.16□□□□□ -2.22
H3F3AP84243 PRELID3BP1-201ENST00000457142 540 ntBASIC1.16□□□□□ -2.22
H3F3AP84243 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.16□□□□□ -2.22
H3F3AP84243 MEMO1P3-201ENST00000459811 302 ntBASIC1.16□□□□□ -2.22
H3F3AP84243 AL121594.1-201ENST00000475906 575 ntBASIC1.16□□□□□ -2.22
H3F3AP84243 AC004223.1-201ENST00000479840 271 ntBASIC1.16□□□□□ -2.22
H3F3AP84243 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
H3F3AP84243 AC093801.2-201ENST00000503966 1050 ntBASIC1.16□□□□□ -2.22
H3F3AP84243 RNU1-92P-201ENST00000517017 135 ntBASIC1.16□□□□□ -2.22
H3F3AP84243 RN7SKP258-201ENST00000517151 304 ntBASIC1.16□□□□□ -2.22
H3F3AP84243 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.16□□□□□ -2.22
H3F3AP84243 AC084364.2-201ENST00000546924 395 ntBASIC1.16□□□□□ -2.22
H3F3AP84243 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.16□□□□□ -2.22
H3F3AP84243 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.16□□□□□ -2.22
H3F3AP84243 MIR4782-201ENST00000577987 79 ntBASIC1.16□□□□□ -2.22
H3F3AP84243 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC1.16□□□□□ -2.22
H3F3AP84243 MIR5708-201ENST00000579723 85 ntBASIC1.16□□□□□ -2.22
H3F3AP84243 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.16□□□□□ -2.22
H3F3AP84243 AL670379.10-201ENST00000604330 253 ntBASIC1.16□□□□□ -2.22
H3F3AP84243 AL670379.9-201ENST00000605428 253 ntBASIC1.16□□□□□ -2.22
H3F3AP84243 AL022345.1-201ENST00000607292 135 ntBASIC1.16□□□□□ -2.22
H3F3AP84243 RNU6-91P-201ENST00000607774 107 ntBASIC1.16□□□□□ -2.22
H3F3AP84243 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
H3F3AP84243 AC091812.1-201ENST00000432235 1948 ntBASIC1.15□□□□□ -2.22
H3F3AP84243 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.15□□□□□ -2.23
H3F3AP84243 Y_RNA.140-201ENST00000363474 103 ntBASIC1.15□□□□□ -2.23
H3F3AP84243 RNU6-898P-201ENST00000365627 104 ntBASIC1.15□□□□□ -2.23
H3F3AP84243 RNU2-32P-201ENST00000411193 191 ntBASIC1.15□□□□□ -2.23
H3F3AP84243 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
H3F3AP84243 FO393414.1-201ENST00000428697 1184 ntBASIC1.15□□□□□ -2.23
H3F3AP84243 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms