Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC005261.5-201ENST00000596280 355 ntBASIC2.61□□□□□ -1.99
CX3CL1P78423 NRBF2P5-201ENST00000603087 788 ntBASIC2.61□□□□□ -1.99
CX3CL1P78423 AL355877.2-201ENST00000603670 358 ntBASIC2.61□□□□□ -1.99
CX3CL1P78423 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CX3CL1P78423 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.61□□□□□ -1.99
CX3CL1P78423 AL020991.1-201ENST00000612314 373 ntBASIC2.61□□□□□ -1.99
CX3CL1P78423 AC002553.4-201ENST00000616896 331 ntBASIC2.61□□□□□ -1.99
CX3CL1P78423 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.61□□□□□ -1.99
CX3CL1P78423 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CX3CL1P78423 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CX3CL1P78423 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.61□□□□□ -1.99
CX3CL1P78423 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
CX3CL1P78423 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CX3CL1P78423 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.6□□□□□ -1.99
CX3CL1P78423 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CX3CL1P78423 AC010889.1-201ENST00000566193 2666 ntBASIC2.6□□□□□ -1.99
CX3CL1P78423 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.6□□□□□ -1.99
CX3CL1P78423 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CX3CL1P78423 RNU1-70P-201ENST00000362618 164 ntBASIC2.6□□□□□ -1.99
CX3CL1P78423 U3.6-201ENST00000363622 211 ntBASIC2.6□□□□□ -1.99
CX3CL1P78423 Y_RNA.324-201ENST00000365165 102 ntBASIC2.6□□□□□ -1.99
CX3CL1P78423 RNU1-100P-201ENST00000365255 165 ntBASIC2.6□□□□□ -1.99
CX3CL1P78423 U3.37-201ENST00000408528 213 ntBASIC2.6□□□□□ -1.99
CX3CL1P78423 RPL32P35-201ENST00000415214 394 ntBASIC2.6□□□□□ -1.99
CX3CL1P78423 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.6□□□□□ -1.99
CX3CL1P78423 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.6□□□□□ -1.99
CX3CL1P78423 ARL5AP1-201ENST00000418991 388 ntBASIC2.6□□□□□ -1.99
CX3CL1P78423 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.6□□□□□ -1.99
CX3CL1P78423 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.6□□□□□ -1.99
CX3CL1P78423 AL161651.1-201ENST00000440882 223 ntBASIC2.6□□□□□ -1.99
CX3CL1P78423 AC008155.2-201ENST00000464337 397 ntBASIC2.6□□□□□ -1.99
CX3CL1P78423 AC006483.1-201ENST00000487308 313 ntBASIC2.6□□□□□ -1.99
CX3CL1P78423 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.6□□□□□ -1.99
CX3CL1P78423 HIGD1AP13-201ENST00000509878 289 ntBASIC2.6□□□□□ -1.99
CX3CL1P78423 TBCAP3-201ENST00000512475 312 ntBASIC2.6□□□□□ -1.99
CX3CL1P78423 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.6□□□□□ -1.99
CX3CL1P78423 Y_RNA.665-201ENST00000516177 98 ntBASIC2.6□□□□□ -1.99
CX3CL1P78423 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.6□□□□□ -1.99
CX3CL1P78423 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.6□□□□□ -1.99
CX3CL1P78423 AL157817.1-201ENST00000614264 790 ntBASIC2.6□□□□□ -1.99
CX3CL1P78423 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.6□□□□□ -1.99
CX3CL1P78423 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.6□□□□□ -1.99
CX3CL1P78423 AC103705.1-201ENST00000619013 241 ntBASIC2.6□□□□□ -1.99
CX3CL1P78423 AC010378.1-201ENST00000619270 362 ntBASIC2.6□□□□□ -1.99
CX3CL1P78423 MIR7975-201ENST00000619350 68 ntBASIC2.6□□□□□ -1.99
CX3CL1P78423 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.6□□□□□ -1.99
CX3CL1P78423 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CX3CL1P78423 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.6□□□□□ -1.99
CX3CL1P78423 MTND5P19-201ENST00000424872 1794 ntBASIC2.59□□□□□ -1.99
CX3CL1P78423 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CX3CL1P78423 AC093831.2-201ENST00000624393 3427 ntBASIC2.59□□□□□ -1.99
CX3CL1P78423 Y_RNA.615-201ENST00000410769 117 ntBASIC2.59□□□□□ -1.99
CX3CL1P78423 AC096649.2-201ENST00000416186 393 ntBASIC2.59□□□□□ -1.99
CX3CL1P78423 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.59□□□□□ -1.99
CX3CL1P78423 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.59□□□□□ -1.99
CX3CL1P78423 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.59□□□□□ -1.99
CX3CL1P78423 TOMM20P4-201ENST00000427861 435 ntBASIC2.59□□□□□ -1.99
CX3CL1P78423 YME1L1P1-201ENST00000429435 297 ntBASIC2.59□□□□□ -1.99
CX3CL1P78423 MTND1P2-201ENST00000430604 821 ntBASIC2.59□□□□□ -1.99
CX3CL1P78423 MRPS10P2-201ENST00000431226 381 ntBASIC2.59□□□□□ -1.99
CX3CL1P78423 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.59□□□□□ -1.99
CX3CL1P78423 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.59□□□□□ -1.99
CX3CL1P78423 NIPA2P5-201ENST00000452282 464 ntBASIC2.59□□□□□ -1.99
CX3CL1P78423 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.59□□□□□ -1.99
CX3CL1P78423 AC117503.1-201ENST00000472241 394 ntBASIC2.59□□□□□ -1.99
CX3CL1P78423 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.59□□□□□ -1.99
CX3CL1P78423 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.59□□□□□ -1.99
CX3CL1P78423 RNA5SP385-201ENST00000515947 110 ntBASIC2.59□□□□□ -1.99
CX3CL1P78423 RNU1-143P-201ENST00000516296 146 ntBASIC2.59□□□□□ -1.99
CX3CL1P78423 SNORD19.2-201ENST00000516978 73 ntBASIC2.59□□□□□ -1.99
CX3CL1P78423 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.59□□□□□ -1.99
CX3CL1P78423 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.59□□□□□ -1.99
CX3CL1P78423 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.59□□□□□ -1.99
CX3CL1P78423 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.59□□□□□ -1.99
CX3CL1P78423 MIR3941-201ENST00000582572 103 ntBASIC2.59□□□□□ -1.99
CX3CL1P78423 AC005498.1-201ENST00000592125 465 ntBASIC2.59□□□□□ -1.99
CX3CL1P78423 BNIP3P25-201ENST00000596023 559 ntBASIC2.59□□□□□ -1.99
CX3CL1P78423 AC008739.2-201ENST00000597006 317 ntBASIC2.59□□□□□ -1.99
CX3CL1P78423 AC073657.2-201ENST00000605661 303 ntBASIC2.59□□□□□ -1.99
CX3CL1P78423 Z82243.1-201ENST00000609432 473 ntBASIC2.59□□□□□ -1.99
CX3CL1P78423 U1.23-201ENST00000610293 146 ntBASIC2.59□□□□□ -1.99
CX3CL1P78423 AC011890.2-201ENST00000613393 294 ntBASIC2.59□□□□□ -1.99
CX3CL1P78423 RNU1-68P-201ENST00000615382 146 ntBASIC2.59□□□□□ -1.99
CX3CL1P78423 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.59□□□□□ -1.99
CX3CL1P78423 UCA1.1-201ENST00000620952 75 ntBASIC2.59□□□□□ -1.99
CX3CL1P78423 U1.39-201ENST00000621562 146 ntBASIC2.59□□□□□ -1.99
CX3CL1P78423 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.59□□□□□ -1.99
CX3CL1P78423 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
CX3CL1P78423 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.59□□□□□ -2
CX3CL1P78423 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.58□□□□□ -2
CX3CL1P78423 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
CX3CL1P78423 U3.12-201ENST00000364498 214 ntBASIC2.58□□□□□ -2
CX3CL1P78423 RNU6-1280P-201ENST00000365211 107 ntBASIC2.58□□□□□ -2
CX3CL1P78423 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
CX3CL1P78423 MIR23B-201ENST00000384832 97 ntBASIC2.58□□□□□ -2
CX3CL1P78423 RNU6-332P-201ENST00000391193 108 ntBASIC2.58□□□□□ -2
CX3CL1P78423 AL122016.1-201ENST00000403365 367 ntBASIC2.58□□□□□ -2
CX3CL1P78423 RNU4-26P-201ENST00000410270 107 ntBASIC2.58□□□□□ -2
CX3CL1P78423 RNA5SP118-201ENST00000410385 109 ntBASIC2.58□□□□□ -2
CX3CL1P78423 RNA5SP44-201ENST00000410446 133 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms