Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC-0.35□□□□□ -2.47
RPL39P62891 SSR3-208ENST00000496050 579 ntTSL 4 BASIC-0.35□□□□□ -2.47
RPL39P62891 AC093767.1-201ENST00000504523 156 ntBASIC-0.35□□□□□ -2.47
RPL39P62891 AL138963.2-201ENST00000605137 226 ntBASIC-0.35□□□□□ -2.47
RPL39P62891 AC112220.3-201ENST00000605502 502 ntBASIC-0.35□□□□□ -2.47
RPL39P62891 AL162730.1-201ENST00000605734 292 ntBASIC-0.35□□□□□ -2.47
RPL39P62891 MIR8063-201ENST00000621930 81 ntBASIC-0.35□□□□□ -2.47
RPL39P62891 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC-0.35□□□□□ -2.47
RPL39P62891 MIR200A-201ENST00000384875 90 ntBASIC-0.36□□□□□ -2.47
RPL39P62891 RNA5SP501-201ENST00000410990 112 ntBASIC-0.36□□□□□ -2.47
RPL39P62891 AL359704.1-201ENST00000411586 781 ntBASIC-0.36□□□□□ -2.47
RPL39P62891 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC-0.36□□□□□ -2.47
RPL39P62891 RPS15AP5-201ENST00000436276 388 ntBASIC-0.36□□□□□ -2.47
RPL39P62891 AC111000.5-201ENST00000506559 1178 ntBASIC-0.36□□□□□ -2.47
RPL39P62891 LRRC34P2-201ENST00000514850 553 ntBASIC-0.36□□□□□ -2.47
RPL39P62891 DUXAP1-201ENST00000556632 463 ntBASIC-0.36□□□□□ -2.47
RPL39P62891 AC090888.2-201ENST00000559765 1144 ntBASIC-0.36□□□□□ -2.47
RPL39P62891 AC026271.5-201ENST00000577873 130 ntBASIC-0.36□□□□□ -2.47
RPL39P62891 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC-0.36□□□□□ -2.47
RPL39P62891 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC-0.36□□□□□ -2.47
RPL39P62891 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC-0.36□□□□□ -2.47
RPL39P62891 AC092354.1-201ENST00000606057 376 ntBASIC-0.36□□□□□ -2.47
RPL39P62891 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC-0.37□□□□□ -2.47
RPL39P62891 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC-0.37□□□□□ -2.47
RPL39P62891 RNU6V-201ENST00000384105 107 ntBASIC-0.37□□□□□ -2.47
RPL39P62891 MIR598-201ENST00000384868 97 ntBASIC-0.37□□□□□ -2.47
RPL39P62891 AC010099.3-201ENST00000423896 409 ntBASIC-0.37□□□□□ -2.47
RPL39P62891 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC-0.37□□□□□ -2.47
RPL39P62891 DUXAP8-207ENST00000456786 622 ntBASIC-0.37□□□□□ -2.47
RPL39P62891 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC-0.37□□□□□ -2.47
RPL39P62891 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC-0.37□□□□□ -2.47
RPL39P62891 AC141557.1-201ENST00000540982 400 ntBASIC-0.37□□□□□ -2.47
RPL39P62891 ANKRD36BP2-206ENST00000575193 1245 ntBASIC-0.37□□□□□ -2.47
RPL39P62891 BNIP3P8-201ENST00000597863 560 ntBASIC-0.37□□□□□ -2.47
RPL39P62891 AC010620.1-201ENST00000601088 1102 ntBASIC-0.37□□□□□ -2.47
RPL39P62891 AL353778.1-201ENST00000603149 408 ntBASIC-0.37□□□□□ -2.47
RPL39P62891 AL713866.2-201ENST00000603579 219 ntBASIC-0.37□□□□□ -2.47
RPL39P62891 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC-0.37□□□□□ -2.47
RPL39P62891 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC-0.38□□□□□ -2.47
RPL39P62891 MT-TP-201ENST00000387461 68 ntBASIC-0.38□□□□□ -2.47
RPL39P62891 RPS3AP36-201ENST00000398190 775 ntBASIC-0.38□□□□□ -2.47
RPL39P62891 HMGB1P17-201ENST00000403495 628 ntBASIC-0.38□□□□□ -2.47
RPL39P62891 MIR1267-201ENST00000408723 78 ntBASIC-0.38□□□□□ -2.47
RPL39P62891 EBAG9P1-201ENST00000418955 543 ntBASIC-0.38□□□□□ -2.47
RPL39P62891 C1DP1-201ENST00000426049 402 ntBASIC-0.38□□□□□ -2.47
RPL39P62891 FCF1P6-201ENST00000456841 595 ntBASIC-0.38□□□□□ -2.47
RPL39P62891 snoU13.25-201ENST00000458945 104 ntBASIC-0.38□□□□□ -2.47
RPL39P62891 AC092991.1-201ENST00000477176 376 ntBASIC-0.38□□□□□ -2.47
RPL39P62891 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC-0.38□□□□□ -2.47
RPL39P62891 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.38□□□□□ -2.47
RPL39P62891 AC104229.1-201ENST00000561364 255 ntBASIC-0.38□□□□□ -2.47
RPL39P62891 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC-0.38□□□□□ -2.47
RPL39P62891 MZT1P2-201ENST00000604387 248 ntBASIC-0.38□□□□□ -2.47
RPL39P62891 RNU6-546P-201ENST00000383991 107 ntBASIC-0.39□□□□□ -2.47
RPL39P62891 RNU2-63P-201ENST00000410792 194 ntBASIC-0.39□□□□□ -2.47
RPL39P62891 RNA5SP100-201ENST00000410903 110 ntBASIC-0.39□□□□□ -2.47
RPL39P62891 RNA5SP59-201ENST00000410922 110 ntBASIC-0.39□□□□□ -2.47
RPL39P62891 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC-0.39□□□□□ -2.47
RPL39P62891 BX664727.1-201ENST00000416024 466 ntBASIC-0.39□□□□□ -2.47
RPL39P62891 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC-0.39□□□□□ -2.47
RPL39P62891 5S_rRNA.3-201ENST00000517021 110 ntBASIC-0.39□□□□□ -2.47
RPL39P62891 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC-0.39□□□□□ -2.47
RPL39P62891 5S_rRNA.19-201ENST00000612131 110 ntBASIC-0.39□□□□□ -2.47
RPL39P62891 AL132822.1-201ENST00000617063 513 ntBASIC-0.39□□□□□ -2.47
RPL39P62891 AC123767.1-202ENST00000620407 817 ntBASIC-0.39□□□□□ -2.47
RPL39P62891 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC-0.39□□□□□ -2.47
RPL39P62891 5S_rRNA.18-201ENST00000621941 110 ntBASIC-0.39□□□□□ -2.47
RPL39P62891 IST1-227ENST00000626438 126 ntTSL 5 BASIC-0.39□□□□□ -2.47
RPL39P62891 ZNF663P-202ENST00000641770 1131 ntBASIC-0.39□□□□□ -2.47
RPL39P62891 MIR330-201ENST00000362196 94 ntBASIC-0.4□□□□□ -2.47
RPL39P62891 LINC01347-201ENST00000417964 355 ntBASIC-0.4□□□□□ -2.47
RPL39P62891 BPY2DP-201ENST00000422208 265 ntBASIC-0.4□□□□□ -2.47
RPL39P62891 AL358176.2-201ENST00000425769 204 ntBASIC-0.4□□□□□ -2.47
RPL39P62891 AC007742.1-201ENST00000425789 329 ntBASIC-0.4□□□□□ -2.47
RPL39P62891 RSL24D1P8-201ENST00000434442 492 ntBASIC-0.4□□□□□ -2.47
RPL39P62891 RPL37P21-201ENST00000435890 276 ntBASIC-0.4□□□□□ -2.47
RPL39P62891 ELOCP26-201ENST00000436067 329 ntBASIC-0.4□□□□□ -2.47
RPL39P62891 SNRPEP9-201ENST00000436794 238 ntBASIC-0.4□□□□□ -2.47
RPL39P62891 RAD1P2-201ENST00000446414 663 ntBASIC-0.4□□□□□ -2.47
RPL39P62891 AC132479.1-201ENST00000449160 144 ntBASIC-0.4□□□□□ -2.47
RPL39P62891 ATP5J2P3-201ENST00000451550 258 ntBASIC-0.4□□□□□ -2.47
RPL39P62891 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC-0.4□□□□□ -2.47
RPL39P62891 GTF2IP12-201ENST00000456547 356 ntBASIC-0.4□□□□□ -2.47
RPL39P62891 RPL23AP54-201ENST00000495129 419 ntBASIC-0.4□□□□□ -2.47
RPL39P62891 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC-0.4□□□□□ -2.47
RPL39P62891 RNA5SP168-201ENST00000516642 112 ntBASIC-0.4□□□□□ -2.47
RPL39P62891 RNU6-943P-201ENST00000516960 98 ntBASIC-0.4□□□□□ -2.47
RPL39P62891 MTND2P17-201ENST00000550281 688 ntBASIC-0.4□□□□□ -2.47
RPL39P62891 AL121821.2-201ENST00000556081 394 ntBASIC-0.4□□□□□ -2.47
RPL39P62891 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC-0.4□□□□□ -2.47
RPL39P62891 RN7SL793P-201ENST00000583259 296 ntBASIC-0.4□□□□□ -2.47
RPL39P62891 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC-0.4□□□□□ -2.47
RPL39P62891 AC096772.1-201ENST00000609146 564 ntBASIC-0.4□□□□□ -2.47
RPL39P62891 AC093838.1-201ENST00000613014 469 ntBASIC-0.4□□□□□ -2.47
RPL39P62891 AC073308.1-201ENST00000623696 305 ntBASIC-0.4□□□□□ -2.47
RPL39P62891 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC-0.4□□□□□ -2.47
RPL39P62891 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC-0.41□□□□□ -2.47
RPL39P62891 AL079343.1-201ENST00000572358 1771 ntBASIC-0.41□□□□□ -2.47
RPL39P62891 SNRPEP3-201ENST00000338402 276 ntBASIC-0.41□□□□□ -2.48
RPL39P62891 RPL21P111-201ENST00000418453 477 ntBASIC-0.41□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 160.4 ms