Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC104472.2-201ENST00000469035 601 ntBASIC3.01□□□□□ -1.93
CDH12P55289 HMGB1P30-201ENST00000492455 606 ntBASIC3.01□□□□□ -1.93
CDH12P55289 RNU6-572P-201ENST00000516724 80 ntBASIC3.01□□□□□ -1.93
CDH12P55289 AC023632.4-201ENST00000517783 191 ntBASIC3.01□□□□□ -1.93
CDH12P55289 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.01□□□□□ -1.93
CDH12P55289 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.01□□□□□ -1.93
CDH12P55289 COPS8P3-201ENST00000526024 482 ntBASIC3.01□□□□□ -1.93
CDH12P55289 HPRT1P3-201ENST00000539521 576 ntBASIC3.01□□□□□ -1.93
CDH12P55289 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.01□□□□□ -1.93
CDH12P55289 HSPE1P7-201ENST00000604681 321 ntBASIC3.01□□□□□ -1.93
CDH12P55289 APOOP1-201ENST00000604695 592 ntBASIC3.01□□□□□ -1.93
CDH12P55289 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.01□□□□□ -1.93
CDH12P55289 AL731566.2-201ENST00000618971 317 ntBASIC3.01□□□□□ -1.93
CDH12P55289 SNORA50A-202ENST00000629536 136 ntBASIC3.01□□□□□ -1.93
CDH12P55289 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CDH12P55289 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
CDH12P55289 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
CDH12P55289 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3□□□□□ -1.93
CDH12P55289 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
CDH12P55289 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3□□□□□ -1.93
CDH12P55289 RNA5SP295-201ENST00000362655 121 ntBASIC3□□□□□ -1.93
CDH12P55289 RNU4-79P-201ENST00000362764 141 ntBASIC3□□□□□ -1.93
CDH12P55289 Y_RNA.58-201ENST00000362807 102 ntBASIC3□□□□□ -1.93
CDH12P55289 Y_RNA.154-201ENST00000363624 102 ntBASIC3□□□□□ -1.93
CDH12P55289 Y_RNA.813-201ENST00000364639 102 ntBASIC3□□□□□ -1.93
CDH12P55289 RNY3P1-201ENST00000365085 102 ntBASIC3□□□□□ -1.93
CDH12P55289 RNY3-201ENST00000365484 102 ntBASIC3□□□□□ -1.93
CDH12P55289 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3□□□□□ -1.93
CDH12P55289 SNORD116-11-201ENST00000383882 92 ntBASIC3□□□□□ -1.93
CDH12P55289 Y_RNA.490-201ENST00000384413 102 ntBASIC3□□□□□ -1.93
CDH12P55289 RPS4XP3-201ENST00000398541 413 ntBASIC3□□□□□ -1.93
CDH12P55289 FAT1P1-201ENST00000406588 507 ntBASIC3□□□□□ -1.93
CDH12P55289 MIR548K-201ENST00000408406 116 ntBASIC3□□□□□ -1.93
CDH12P55289 MIR548F5-201ENST00000408421 86 ntBASIC3□□□□□ -1.93
CDH12P55289 RNA5SP229-201ENST00000410809 99 ntBASIC3□□□□□ -1.93
CDH12P55289 Y_RNA.623-201ENST00000411128 95 ntBASIC3□□□□□ -1.93
CDH12P55289 NCOR1P3-201ENST00000420479 303 ntBASIC3□□□□□ -1.93
CDH12P55289 RPL7P37-201ENST00000425095 738 ntBASIC3□□□□□ -1.93
CDH12P55289 SKA2P1-201ENST00000425592 390 ntBASIC3□□□□□ -1.93
CDH12P55289 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3□□□□□ -1.93
CDH12P55289 HMGB1P9-201ENST00000429856 646 ntBASIC3□□□□□ -1.93
CDH12P55289 NDUFB1P2-201ENST00000449477 176 ntBASIC3□□□□□ -1.93
CDH12P55289 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3□□□□□ -1.93
CDH12P55289 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3□□□□□ -1.93
CDH12P55289 AC092798.1-201ENST00000458542 409 ntBASIC3□□□□□ -1.93
CDH12P55289 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3□□□□□ -1.93
CDH12P55289 RPL21P13-201ENST00000488305 481 ntBASIC3□□□□□ -1.93
CDH12P55289 AC092185.1-201ENST00000491371 97 ntBASIC3□□□□□ -1.93
CDH12P55289 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3□□□□□ -1.93
CDH12P55289 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3□□□□□ -1.93
CDH12P55289 AC006445.2-201ENST00000510061 472 ntBASIC3□□□□□ -1.93
CDH12P55289 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3□□□□□ -1.93
CDH12P55289 RNU6-1332P-201ENST00000516666 104 ntBASIC3□□□□□ -1.93
CDH12P55289 RNU6-703P-201ENST00000516946 107 ntBASIC3□□□□□ -1.93
CDH12P55289 RNA5SP454-201ENST00000517231 127 ntBASIC3□□□□□ -1.93
CDH12P55289 AP005639.2-201ENST00000527592 928 ntBASIC3□□□□□ -1.93
CDH12P55289 HMGB1P14-201ENST00000557424 591 ntBASIC3□□□□□ -1.93
CDH12P55289 H3F3AP1-201ENST00000559984 334 ntBASIC3□□□□□ -1.93
CDH12P55289 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3□□□□□ -1.93
CDH12P55289 POLR3GP2-201ENST00000588366 668 ntBASIC3□□□□□ -1.93
CDH12P55289 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
CDH12P55289 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CDH12P55289 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
CDH12P55289 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
CDH12P55289 AC006026.1-201ENST00000444025 1803 ntBASIC3□□□□□ -1.93
CDH12P55289 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
CDH12P55289 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
CDH12P55289 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CDH12P55289 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.99□□□□□ -1.93
CDH12P55289 Y_RNA.11-201ENST00000362375 109 ntBASIC2.99□□□□□ -1.93
CDH12P55289 RNU6-1035P-201ENST00000384477 107 ntBASIC2.99□□□□□ -1.93
CDH12P55289 RPL21P3-201ENST00000395517 478 ntBASIC2.99□□□□□ -1.93
CDH12P55289 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.99□□□□□ -1.93
CDH12P55289 AC098614.2-201ENST00000426040 255 ntBASIC2.99□□□□□ -1.93
CDH12P55289 AC007560.1-201ENST00000426912 237 ntBASIC2.99□□□□□ -1.93
CDH12P55289 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.99□□□□□ -1.93
CDH12P55289 AC091286.1-201ENST00000431233 461 ntBASIC2.99□□□□□ -1.93
CDH12P55289 AC146507.2-201ENST00000460608 476 ntBASIC2.99□□□□□ -1.93
CDH12P55289 MTCO1P29-201ENST00000496868 288 ntBASIC2.99□□□□□ -1.93
CDH12P55289 AC093663.1-201ENST00000497190 394 ntBASIC2.99□□□□□ -1.93
CDH12P55289 AC008526.1-201ENST00000509149 338 ntBASIC2.99□□□□□ -1.93
CDH12P55289 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.99□□□□□ -1.93
CDH12P55289 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.99□□□□□ -1.93
CDH12P55289 AP005597.4-201ENST00000526762 229 ntBASIC2.99□□□□□ -1.93
CDH12P55289 GLYCAM1-201ENST00000546596 285 ntBASIC2.99□□□□□ -1.93
CDH12P55289 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.99□□□□□ -1.93
CDH12P55289 AC025423.5-201ENST00000550230 219 ntBASIC2.99□□□□□ -1.93
CDH12P55289 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.99□□□□□ -1.93
CDH12P55289 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.99□□□□□ -1.93
CDH12P55289 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.99□□□□□ -1.93
CDH12P55289 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.99□□□□□ -1.93
CDH12P55289 AC138761.3-201ENST00000579993 334 ntBASIC2.99□□□□□ -1.93
CDH12P55289 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.99□□□□□ -1.93
CDH12P55289 AL162713.1-201ENST00000604480 262 ntBASIC2.99□□□□□ -1.93
CDH12P55289 NUTF2P8-201ENST00000604593 363 ntBASIC2.99□□□□□ -1.93
CDH12P55289 AC123912.5-201ENST00000605470 343 ntBASIC2.99□□□□□ -1.93
CDH12P55289 RNU6-85P-201ENST00000605989 107 ntBASIC2.99□□□□□ -1.93
CDH12P55289 AC107294.3-201ENST00000609211 526 ntBASIC2.99□□□□□ -1.93
CDH12P55289 AC135507.2-201ENST00000612443 309 ntBASIC2.99□□□□□ -1.93
CDH12P55289 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms