Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 AC005326.1-201ENST00000429197 123 ntBASIC3.6□□□□□ -1.83
CACNA2D1P54289 HMGN2P7-201ENST00000456186 273 ntBASIC3.6□□□□□ -1.83
CACNA2D1P54289 RPS27P29-201ENST00000463110 252 ntBASIC3.6□□□□□ -1.83
CACNA2D1P54289 AC092451.1-201ENST00000480211 153 ntBASIC3.6□□□□□ -1.83
CACNA2D1P54289 AC116337.1-201ENST00000509680 687 ntBASIC3.6□□□□□ -1.83
CACNA2D1P54289 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.6□□□□□ -1.83
CACNA2D1P54289 AC026782.1-201ENST00000512952 449 ntBASIC3.6□□□□□ -1.83
CACNA2D1P54289 Y_RNA.670-201ENST00000516255 105 ntBASIC3.6□□□□□ -1.83
CACNA2D1P54289 RN7SKP289-201ENST00000517244 295 ntBASIC3.6□□□□□ -1.83
CACNA2D1P54289 RNU6-323P-201ENST00000521915 107 ntBASIC3.6□□□□□ -1.83
CACNA2D1P54289 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.6□□□□□ -1.83
CACNA2D1P54289 AC110588.1-201ENST00000559699 137 ntBASIC3.6□□□□□ -1.83
CACNA2D1P54289 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.6□□□□□ -1.83
CACNA2D1P54289 AC012531.5-201ENST00000611375 151 ntBASIC3.6□□□□□ -1.83
CACNA2D1P54289 AC096577.2-201ENST00000611455 153 ntBASIC3.6□□□□□ -1.83
CACNA2D1P54289 AC011890.2-201ENST00000613393 294 ntBASIC3.6□□□□□ -1.83
CACNA2D1P54289 AL450472.3-201ENST00000615578 367 ntBASIC3.6□□□□□ -1.83
CACNA2D1P54289 PISRT1.1-201ENST00000616930 107 ntBASIC3.6□□□□□ -1.83
CACNA2D1P54289 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.6□□□□□ -1.83
CACNA2D1P54289 AC007998.5-201ENST00000622938 237 ntBASIC3.6□□□□□ -1.83
CACNA2D1P54289 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.6□□□□□ -1.83
CACNA2D1P54289 MFSD8-233ENST00000641482 4860 ntBASIC3.6□□□□□ -1.83
CACNA2D1P54289 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CACNA2D1P54289 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CACNA2D1P54289 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CACNA2D1P54289 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CACNA2D1P54289 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CACNA2D1P54289 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.59□□□□□ -1.83
CACNA2D1P54289 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.59□□□□□ -1.83
CACNA2D1P54289 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CACNA2D1P54289 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.59□□□□□ -1.83
CACNA2D1P54289 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.83
CACNA2D1P54289 AC058791.1-201ENST00000608412 3198 ntBASIC3.59□□□□□ -1.83
CACNA2D1P54289 SNORD3E-201ENST00000362899 217 ntBASIC3.59□□□□□ -1.83
CACNA2D1P54289 Y_RNA.193-201ENST00000363979 102 ntBASIC3.59□□□□□ -1.83
CACNA2D1P54289 RNU6-593P-201ENST00000364716 112 ntBASIC3.59□□□□□ -1.83
CACNA2D1P54289 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.59□□□□□ -1.83
CACNA2D1P54289 Y_RNA.401-201ENST00000383965 117 ntBASIC3.59□□□□□ -1.83
CACNA2D1P54289 RNU6-1181P-201ENST00000384191 106 ntBASIC3.59□□□□□ -1.83
CACNA2D1P54289 Y_RNA.452-201ENST00000384202 108 ntBASIC3.59□□□□□ -1.83
CACNA2D1P54289 RNU6-434P-201ENST00000384376 107 ntBASIC3.59□□□□□ -1.83
CACNA2D1P54289 Y_RNA.557-201ENST00000384680 107 ntBASIC3.59□□□□□ -1.83
CACNA2D1P54289 MIR607-201ENST00000385241 96 ntBASIC3.59□□□□□ -1.83
CACNA2D1P54289 RNU6-1050P-201ENST00000410388 107 ntBASIC3.59□□□□□ -1.83
CACNA2D1P54289 Z99755.1-201ENST00000414048 380 ntBASIC3.59□□□□□ -1.83
CACNA2D1P54289 RPL7P10-201ENST00000417407 739 ntBASIC3.59□□□□□ -1.83
CACNA2D1P54289 AC004866.2-201ENST00000438285 481 ntBASIC3.59□□□□□ -1.83
CACNA2D1P54289 NEFMP1-201ENST00000443423 1006 ntBASIC3.59□□□□□ -1.83
CACNA2D1P54289 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.59□□□□□ -1.83
CACNA2D1P54289 CEACAMP4-201ENST00000457676 421 ntBASIC3.59□□□□□ -1.83
CACNA2D1P54289 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.59□□□□□ -1.83
CACNA2D1P54289 MTCO2P24-201ENST00000515611 426 ntBASIC3.59□□□□□ -1.83
CACNA2D1P54289 SNORA25.10-201ENST00000515926 124 ntBASIC3.59□□□□□ -1.83
CACNA2D1P54289 RNU6-120P-201ENST00000516077 103 ntBASIC3.59□□□□□ -1.83
CACNA2D1P54289 RNU6-764P-201ENST00000516396 105 ntBASIC3.59□□□□□ -1.83
CACNA2D1P54289 Y_RNA.708-201ENST00000516950 96 ntBASIC3.59□□□□□ -1.83
CACNA2D1P54289 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.59□□□□□ -1.83
CACNA2D1P54289 MIR3668-201ENST00000582138 75 ntBASIC3.59□□□□□ -1.83
CACNA2D1P54289 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.59□□□□□ -1.83
CACNA2D1P54289 AL355598.1-201ENST00000604169 202 ntBASIC3.59□□□□□ -1.83
CACNA2D1P54289 AC006157.1-201ENST00000611750 366 ntBASIC3.59□□□□□ -1.83
CACNA2D1P54289 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.59□□□□□ -1.83
CACNA2D1P54289 MIR8058-201ENST00000615737 89 ntBASIC3.59□□□□□ -1.83
CACNA2D1P54289 AL162373.1-201ENST00000620433 407 ntBASIC3.59□□□□□ -1.83
CACNA2D1P54289 AC022418.1-201ENST00000624118 445 ntBASIC3.59□□□□□ -1.83
CACNA2D1P54289 CDC27P3-201ENST00000635418 1910 ntBASIC3.59□□□□□ -1.83
CACNA2D1P54289 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CACNA2D1P54289 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
CACNA2D1P54289 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
CACNA2D1P54289 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
CACNA2D1P54289 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
CACNA2D1P54289 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CACNA2D1P54289 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.58□□□□□ -1.84
CACNA2D1P54289 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
CACNA2D1P54289 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CACNA2D1P54289 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
CACNA2D1P54289 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CACNA2D1P54289 MIR30E-201ENST00000362104 92 ntBASIC3.58□□□□□ -1.84
CACNA2D1P54289 SNORA31-201ENST00000362607 130 ntBASIC3.58□□□□□ -1.84
CACNA2D1P54289 Y_RNA.364-201ENST00000365532 101 ntBASIC3.58□□□□□ -1.84
CACNA2D1P54289 RNY1P14-201ENST00000384426 108 ntBASIC3.58□□□□□ -1.84
CACNA2D1P54289 RNU6-306P-201ENST00000384617 107 ntBASIC3.58□□□□□ -1.84
CACNA2D1P54289 AC110754.1-201ENST00000399740 601 ntBASIC3.58□□□□□ -1.84
CACNA2D1P54289 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CACNA2D1P54289 RN7SKP111-201ENST00000410349 271 ntBASIC3.58□□□□□ -1.84
CACNA2D1P54289 Y_RNA.594-201ENST00000410373 140 ntBASIC3.58□□□□□ -1.84
CACNA2D1P54289 RNA5SP293-201ENST00000410527 113 ntBASIC3.58□□□□□ -1.84
CACNA2D1P54289 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.58□□□□□ -1.84
CACNA2D1P54289 AL137014.1-201ENST00000420490 1226 ntBASIC3.58□□□□□ -1.84
CACNA2D1P54289 AL158156.1-201ENST00000422509 473 ntBASIC3.58□□□□□ -1.84
CACNA2D1P54289 AC236972.1-201ENST00000433225 199 ntBASIC3.58□□□□□ -1.84
CACNA2D1P54289 HIGD1AP11-201ENST00000438361 280 ntBASIC3.58□□□□□ -1.84
CACNA2D1P54289 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.58□□□□□ -1.84
CACNA2D1P54289 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.58□□□□□ -1.84
CACNA2D1P54289 BX510359.1-201ENST00000456973 237 ntBASIC3.58□□□□□ -1.84
CACNA2D1P54289 AP002884.2-201ENST00000471647 395 ntBASIC3.58□□□□□ -1.84
CACNA2D1P54289 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.58□□□□□ -1.84
CACNA2D1P54289 RNU6-1095P-201ENST00000516148 108 ntBASIC3.58□□□□□ -1.84
CACNA2D1P54289 RNU6-1073P-201ENST00000517182 106 ntBASIC3.58□□□□□ -1.84
CACNA2D1P54289 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms