Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AC010631.1-201ENST00000474150 156 ntBASIC0.08□□□□□ -2.4
CLTCL1P53675 RPL21P47-201ENST00000483696 477 ntBASIC0.08□□□□□ -2.4
CLTCL1P53675 SNORA31.22-201ENST00000517204 135 ntBASIC0.08□□□□□ -2.4
CLTCL1P53675 AC107954.1-201ENST00000565906 727 ntBASIC0.08□□□□□ -2.4
CLTCL1P53675 OR5T3-201ENST00000303059 1023 ntBASIC0.07□□□□□ -2.4
CLTCL1P53675 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
CLTCL1P53675 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
CLTCL1P53675 MIR493-201ENST00000385254 89 ntBASIC0.07□□□□□ -2.4
CLTCL1P53675 NDUFS5P1-201ENST00000405668 289 ntBASIC0.07□□□□□ -2.4
CLTCL1P53675 RPS27P16-201ENST00000425758 201 ntBASIC0.07□□□□□ -2.4
CLTCL1P53675 HSPE1P13-201ENST00000451143 297 ntBASIC0.07□□□□□ -2.4
CLTCL1P53675 COX6CP6-201ENST00000490840 228 ntBASIC0.07□□□□□ -2.4
CLTCL1P53675 RNU5F-8P-201ENST00000515941 111 ntBASIC0.07□□□□□ -2.4
CLTCL1P53675 MIR892C-201ENST00000516410 77 ntBASIC0.07□□□□□ -2.4
CLTCL1P53675 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.07□□□□□ -2.4
CLTCL1P53675 AC087897.1-201ENST00000550134 156 ntBASIC0.07□□□□□ -2.4
CLTCL1P53675 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.07□□□□□ -2.4
CLTCL1P53675 HMGN2P15-201ENST00000585707 270 ntBASIC0.07□□□□□ -2.4
CLTCL1P53675 MIR8065-201ENST00000620577 100 ntBASIC0.07□□□□□ -2.4
CLTCL1P53675 AC027309.3-201ENST00000623419 351 ntBASIC0.07□□□□□ -2.4
CLTCL1P53675 RPS15AP40-201ENST00000419621 391 ntBASIC0.06□□□□□ -2.4
CLTCL1P53675 TPMTP4-201ENST00000450749 678 ntBASIC0.06□□□□□ -2.4
CLTCL1P53675 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.06□□□□□ -2.4
CLTCL1P53675 TRBVA-201ENST00000498804 316 ntBASIC0.06□□□□□ -2.4
CLTCL1P53675 RNA5SP112-201ENST00000515937 99 ntBASIC0.06□□□□□ -2.4
CLTCL1P53675 RNU6-943P-201ENST00000516960 98 ntBASIC0.06□□□□□ -2.4
CLTCL1P53675 AP001893.2-201ENST00000526949 202 ntBASIC0.06□□□□□ -2.4
CLTCL1P53675 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC0.06□□□□□ -2.4
CLTCL1P53675 AC018659.1-201ENST00000551083 169 ntBASIC0.06□□□□□ -2.4
CLTCL1P53675 AC021739.1-201ENST00000559631 174 ntBASIC0.06□□□□□ -2.4
CLTCL1P53675 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.06□□□□□ -2.4
CLTCL1P53675 U4atac.1-201ENST00000618345 95 ntBASIC0.06□□□□□ -2.4
CLTCL1P53675 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.06□□□□□ -2.4
CLTCL1P53675 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.06□□□□□ -2.4
CLTCL1P53675 RNU6-923P-201ENST00000364753 107 ntBASIC0.05□□□□□ -2.4
CLTCL1P53675 RNY4P3-201ENST00000365254 95 ntBASIC0.05□□□□□ -2.4
CLTCL1P53675 RPS26P5-201ENST00000418544 335 ntBASIC0.05□□□□□ -2.4
CLTCL1P53675 OFD1P18Y-201ENST00000420889 959 ntBASIC0.05□□□□□ -2.4
CLTCL1P53675 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.05□□□□□ -2.4
CLTCL1P53675 snoU13.9-201ENST00000458927 103 ntBASIC0.05□□□□□ -2.4
CLTCL1P53675 AC012435.1-202ENST00000568772 240 ntBASIC0.05□□□□□ -2.4
CLTCL1P53675 AC010900.2-201ENST00000604508 210 ntBASIC0.05□□□□□ -2.4
CLTCL1P53675 AC027335.2-201ENST00000624030 375 ntBASIC0.05□□□□□ -2.4
CLTCL1P53675 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC0.05□□□□□ -2.4
CLTCL1P53675 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.05□□□□□ -2.4
CLTCL1P53675 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.05□□□□□ -2.4
CLTCL1P53675 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
CLTCL1P53675 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
CLTCL1P53675 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.05□□□□□ -2.4
CLTCL1P53675 EIF4EP2-201ENST00000422816 654 ntBASIC0.05□□□□□ -2.4
CLTCL1P53675 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC0.05□□□□□ -2.4
CLTCL1P53675 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.05□□□□□ -2.4
CLTCL1P53675 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.05□□□□□ -2.4
CLTCL1P53675 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC0.05□□□□□ -2.4
CLTCL1P53675 AC073544.2-201ENST00000601155 540 ntBASIC0.05□□□□□ -2.4
CLTCL1P53675 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.05□□□□□ -2.4
CLTCL1P53675 Y_RNA.185-201ENST00000363894 100 ntBASIC0.04□□□□□ -2.4
CLTCL1P53675 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.04□□□□□ -2.4
CLTCL1P53675 MIR1295A-201ENST00000408463 79 ntBASIC0.04□□□□□ -2.4
CLTCL1P53675 ZNF863P-201ENST00000426746 417 ntBASIC0.04□□□□□ -2.4
CLTCL1P53675 AL353691.1-201ENST00000451332 387 ntBASIC0.04□□□□□ -2.4
CLTCL1P53675 AC112206.3-201ENST00000514578 389 ntBASIC0.04□□□□□ -2.4
CLTCL1P53675 RNU6-197P-201ENST00000516680 100 ntBASIC0.04□□□□□ -2.4
CLTCL1P53675 AC034114.1-201ENST00000520293 285 ntBASIC0.04□□□□□ -2.4
CLTCL1P53675 AC105224.1-201ENST00000587055 421 ntBASIC0.04□□□□□ -2.4
CLTCL1P53675 MTND4LP5-201ENST00000605152 292 ntBASIC0.04□□□□□ -2.4
CLTCL1P53675 AC093913.1-201ENST00000614178 329 ntBASIC0.04□□□□□ -2.4
CLTCL1P53675 MIR6864-201ENST00000617935 70 ntBASIC0.04□□□□□ -2.4
CLTCL1P53675 AC006001.4-201ENST00000622243 395 ntBASIC0.04□□□□□ -2.4
CLTCL1P53675 SNORD114-16-201ENST00000363044 70 ntBASIC0.03□□□□□ -2.4
CLTCL1P53675 MT-TP-201ENST00000387461 68 ntBASIC0.03□□□□□ -2.4
CLTCL1P53675 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.03□□□□□ -2.4
CLTCL1P53675 FGF7P5-201ENST00000441829 291 ntBASIC0.03□□□□□ -2.4
CLTCL1P53675 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
CLTCL1P53675 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.03□□□□□ -2.4
CLTCL1P53675 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
CLTCL1P53675 AP003034.1-201ENST00000534621 422 ntBASIC0.03□□□□□ -2.4
CLTCL1P53675 AC008088.1-201ENST00000580993 280 ntBASIC0.03□□□□□ -2.4
CLTCL1P53675 AC017083.3-201ENST00000609955 700 ntBASIC0.03□□□□□ -2.4
CLTCL1P53675 AC099654.5-201ENST00000636479 350 ntBASIC0.03□□□□□ -2.4
CLTCL1P53675 AC092634.6-201ENST00000418558 192 ntBASIC0.02□□□□□ -2.41
CLTCL1P53675 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.02□□□□□ -2.41
CLTCL1P53675 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.02□□□□□ -2.41
CLTCL1P53675 FAM60CP-201ENST00000591086 664 ntBASIC0.02□□□□□ -2.41
CLTCL1P53675 RPL30P11-203ENST00000598995 310 ntBASIC0.02□□□□□ -2.41
CLTCL1P53675 AP003399.1-201ENST00000637534 361 ntBASIC0.02□□□□□ -2.41
CLTCL1P53675 RNU5D-1-201ENST00000363299 116 ntBASIC0.02□□□□□ -2.41
CLTCL1P53675 SNORA8.3-201ENST00000384679 139 ntBASIC0.02□□□□□ -2.41
CLTCL1P53675 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.02□□□□□ -2.41
CLTCL1P53675 RPL37P21-201ENST00000435890 276 ntBASIC0.02□□□□□ -2.41
CLTCL1P53675 AC112492.4-201ENST00000456549 352 ntBASIC0.02□□□□□ -2.41
CLTCL1P53675 RPS26P55-201ENST00000471178 356 ntBASIC0.02□□□□□ -2.41
CLTCL1P53675 AC093838.1-201ENST00000613014 469 ntBASIC0.02□□□□□ -2.41
CLTCL1P53675 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.02□□□□□ -2.41
CLTCL1P53675 AC008443.7-201ENST00000622195 246 ntBASIC0.02□□□□□ -2.41
CLTCL1P53675 ZNF680P1-201ENST00000436625 1469 ntBASIC0.01□□□□□ -2.41
CLTCL1P53675 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
CLTCL1P53675 RNU6-349P-201ENST00000362402 107 ntBASIC0.01□□□□□ -2.41
CLTCL1P53675 SNORA25-201ENST00000384384 134 ntBASIC0.01□□□□□ -2.41
CLTCL1P53675 AC114482.1-201ENST00000418010 247 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms