Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 RNU6-1329P-201ENST00000365664 107 ntBASIC3.61□□□□□ -1.83
SLC6A4P31645 RNU6-1197P-201ENST00000391183 107 ntBASIC3.61□□□□□ -1.83
SLC6A4P31645 RNA5SP129-201ENST00000410276 118 ntBASIC3.61□□□□□ -1.83
SLC6A4P31645 Z92545.1-201ENST00000411782 234 ntBASIC3.61□□□□□ -1.83
SLC6A4P31645 AP000907.1-201ENST00000428428 510 ntBASIC3.61□□□□□ -1.83
SLC6A4P31645 CYCSP35-201ENST00000451978 304 ntBASIC3.61□□□□□ -1.83
SLC6A4P31645 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.61□□□□□ -1.83
SLC6A4P31645 AC096576.1-201ENST00000489014 359 ntBASIC3.61□□□□□ -1.83
SLC6A4P31645 AC090096.1-201ENST00000489168 390 ntBASIC3.61□□□□□ -1.83
SLC6A4P31645 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.61□□□□□ -1.83
SLC6A4P31645 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.61□□□□□ -1.83
SLC6A4P31645 AC093303.1-201ENST00000514549 295 ntBASIC3.61□□□□□ -1.83
SLC6A4P31645 AP006245.1-201ENST00000522549 120 ntBASIC3.61□□□□□ -1.83
SLC6A4P31645 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.61□□□□□ -1.83
SLC6A4P31645 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.61□□□□□ -1.83
SLC6A4P31645 MTCO3P13-201ENST00000577757 781 ntBASIC3.61□□□□□ -1.83
SLC6A4P31645 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.61□□□□□ -1.83
SLC6A4P31645 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.61□□□□□ -1.83
SLC6A4P31645 MIR3171-201ENST00000584270 74 ntBASIC3.61□□□□□ -1.83
SLC6A4P31645 MIR7851-201ENST00000610611 160 ntBASIC3.61□□□□□ -1.83
SLC6A4P31645 MIR7975-201ENST00000619350 68 ntBASIC3.61□□□□□ -1.83
SLC6A4P31645 AC048347.1-201ENST00000624621 427 ntBASIC3.61□□□□□ -1.83
SLC6A4P31645 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.61□□□□□ -1.83
SLC6A4P31645 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.61□□□□□ -1.83
SLC6A4P31645 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SLC6A4P31645 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.6□□□□□ -1.83
SLC6A4P31645 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
SLC6A4P31645 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
SLC6A4P31645 KPNA2P1-201ENST00000458289 1591 ntBASIC3.6□□□□□ -1.83
SLC6A4P31645 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.6□□□□□ -1.83
SLC6A4P31645 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SLC6A4P31645 Y_RNA.445-201ENST00000384168 102 ntBASIC3.6□□□□□ -1.83
SLC6A4P31645 RNU6-1106P-201ENST00000390845 107 ntBASIC3.6□□□□□ -1.83
SLC6A4P31645 HSPE1P26-201ENST00000405341 275 ntBASIC3.6□□□□□ -1.83
SLC6A4P31645 RNU2-68P-201ENST00000410878 191 ntBASIC3.6□□□□□ -1.83
SLC6A4P31645 TOMM20P4-201ENST00000427861 435 ntBASIC3.6□□□□□ -1.83
SLC6A4P31645 HMGB1P9-201ENST00000429856 646 ntBASIC3.6□□□□□ -1.83
SLC6A4P31645 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.6□□□□□ -1.83
SLC6A4P31645 AL627311.1-201ENST00000431514 115 ntBASIC3.6□□□□□ -1.83
SLC6A4P31645 MYL8P-204ENST00000431574 518 ntBASIC3.6□□□□□ -1.83
SLC6A4P31645 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.6□□□□□ -1.83
SLC6A4P31645 RPL30P15-201ENST00000457129 321 ntBASIC3.6□□□□□ -1.83
SLC6A4P31645 RN7SL594P-201ENST00000470590 287 ntBASIC3.6□□□□□ -1.83
SLC6A4P31645 RPL32P34-201ENST00000486380 400 ntBASIC3.6□□□□□ -1.83
SLC6A4P31645 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
SLC6A4P31645 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.6□□□□□ -1.83
SLC6A4P31645 RNU6-1282P-201ENST00000516735 96 ntBASIC3.6□□□□□ -1.83
SLC6A4P31645 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.6□□□□□ -1.83
SLC6A4P31645 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.6□□□□□ -1.83
SLC6A4P31645 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.6□□□□□ -1.83
SLC6A4P31645 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.6□□□□□ -1.83
SLC6A4P31645 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.6□□□□□ -1.83
SLC6A4P31645 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.6□□□□□ -1.83
SLC6A4P31645 ZNF192P1-203ENST00000565888 810 ntBASIC3.6□□□□□ -1.83
SLC6A4P31645 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.6□□□□□ -1.83
SLC6A4P31645 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.6□□□□□ -1.83
SLC6A4P31645 AL669831.3-213ENST00000636676 183 ntBASIC3.6□□□□□ -1.83
SLC6A4P31645 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SLC6A4P31645 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.6□□□□□ -1.83
SLC6A4P31645 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
SLC6A4P31645 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.6□□□□□ -1.83
SLC6A4P31645 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SLC6A4P31645 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SLC6A4P31645 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SLC6A4P31645 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
SLC6A4P31645 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
SLC6A4P31645 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.59□□□□□ -1.83
SLC6A4P31645 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
SLC6A4P31645 AC138393.1-203ENST00000327086 343 ntBASIC3.59□□□□□ -1.83
SLC6A4P31645 MIR369-201ENST00000362155 70 ntBASIC3.59□□□□□ -1.83
SLC6A4P31645 RNA5SP50-201ENST00000363731 107 ntBASIC3.59□□□□□ -1.83
SLC6A4P31645 DEFB109C-201ENST00000382575 264 ntBASIC3.59□□□□□ -1.83
SLC6A4P31645 DEFB109B-201ENST00000382656 264 ntBASIC3.59□□□□□ -1.83
SLC6A4P31645 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
SLC6A4P31645 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
SLC6A4P31645 SNORA75.4-201ENST00000391278 119 ntBASIC3.59□□□□□ -1.83
SLC6A4P31645 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.59□□□□□ -1.83
SLC6A4P31645 AL590632.1-201ENST00000424289 371 ntBASIC3.59□□□□□ -1.83
SLC6A4P31645 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SLC6A4P31645 AC006989.1-201ENST00000427212 131 ntBASIC3.59□□□□□ -1.83
SLC6A4P31645 AC097713.2-201ENST00000430199 356 ntBASIC3.59□□□□□ -1.83
SLC6A4P31645 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.59□□□□□ -1.83
SLC6A4P31645 NDUFB4P6-201ENST00000436819 366 ntBASIC3.59□□□□□ -1.83
SLC6A4P31645 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.59□□□□□ -1.83
SLC6A4P31645 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.59□□□□□ -1.83
SLC6A4P31645 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SLC6A4P31645 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.59□□□□□ -1.83
SLC6A4P31645 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.59□□□□□ -1.83
SLC6A4P31645 AC092436.3-201ENST00000511788 257 ntBASIC3.59□□□□□ -1.83
SLC6A4P31645 RNU6-307P-201ENST00000516743 106 ntBASIC3.59□□□□□ -1.83
SLC6A4P31645 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.59□□□□□ -1.83
SLC6A4P31645 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.59□□□□□ -1.83
SLC6A4P31645 AC006504.6-201ENST00000590142 199 ntBASIC3.59□□□□□ -1.83
SLC6A4P31645 SNRPGP17-201ENST00000603780 214 ntBASIC3.59□□□□□ -1.83
SLC6A4P31645 AC018462.2-201ENST00000605375 395 ntBASIC3.59□□□□□ -1.83
SLC6A4P31645 AL161423.1-201ENST00000613700 262 ntBASIC3.59□□□□□ -1.83
SLC6A4P31645 AC099506.2-201ENST00000623074 221 ntBASIC3.59□□□□□ -1.83
SLC6A4P31645 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.59□□□□□ -1.83
SLC6A4P31645 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.59□□□□□ -1.83
SLC6A4P31645 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms