Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.02□□□□□ -1.93
HOXC13P31276 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HOXC13P31276 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
HOXC13P31276 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HOXC13P31276 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.01□□□□□ -1.93
HOXC13P31276 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HOXC13P31276 RNU5F-6P-201ENST00000362979 116 ntBASIC3.01□□□□□ -1.93
HOXC13P31276 Y_RNA.160-201ENST00000363677 92 ntBASIC3.01□□□□□ -1.93
HOXC13P31276 RNU6-1083P-201ENST00000384022 107 ntBASIC3.01□□□□□ -1.93
HOXC13P31276 RNU6-297P-201ENST00000384636 107 ntBASIC3.01□□□□□ -1.93
HOXC13P31276 MT-TD-201ENST00000387419 68 ntBASIC3.01□□□□□ -1.93
HOXC13P31276 RNU6-750P-201ENST00000390946 107 ntBASIC3.01□□□□□ -1.93
HOXC13P31276 RNU6-780P-201ENST00000391030 104 ntBASIC3.01□□□□□ -1.93
HOXC13P31276 SNORD115.1-201ENST00000391109 76 ntBASIC3.01□□□□□ -1.93
HOXC13P31276 NDUFS5P1-201ENST00000405668 289 ntBASIC3.01□□□□□ -1.93
HOXC13P31276 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.01□□□□□ -1.93
HOXC13P31276 AC073464.1-201ENST00000429823 534 ntBASIC3.01□□□□□ -1.93
HOXC13P31276 SNRPEP9-201ENST00000436794 238 ntBASIC3.01□□□□□ -1.93
HOXC13P31276 AL022238.1-201ENST00000442557 355 ntBASIC3.01□□□□□ -1.93
HOXC13P31276 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.01□□□□□ -1.93
HOXC13P31276 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.01□□□□□ -1.93
HOXC13P31276 MTND4P19-201ENST00000446659 478 ntBASIC3.01□□□□□ -1.93
HOXC13P31276 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.01□□□□□ -1.93
HOXC13P31276 PSPHP1-201ENST00000450062 261 ntBASIC3.01□□□□□ -1.93
HOXC13P31276 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.01□□□□□ -1.93
HOXC13P31276 AC026801.1-201ENST00000497178 464 ntBASIC3.01□□□□□ -1.93
HOXC13P31276 HMGN1P12-201ENST00000499125 195 ntBASIC3.01□□□□□ -1.93
HOXC13P31276 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
HOXC13P31276 Y_RNA.675-201ENST00000516389 149 ntBASIC3.01□□□□□ -1.93
HOXC13P31276 RNU6-358P-201ENST00000516564 75 ntBASIC3.01□□□□□ -1.93
HOXC13P31276 AC022616.6-201ENST00000520479 119 ntBASIC3.01□□□□□ -1.93
HOXC13P31276 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.01□□□□□ -1.93
HOXC13P31276 AL359999.1-201ENST00000604513 294 ntBASIC3.01□□□□□ -1.93
HOXC13P31276 MTND4LP5-201ENST00000605152 292 ntBASIC3.01□□□□□ -1.93
HOXC13P31276 AC004805.2-201ENST00000605382 482 ntBASIC3.01□□□□□ -1.93
HOXC13P31276 AL391813.2-201ENST00000609113 322 ntBASIC3.01□□□□□ -1.93
HOXC13P31276 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.01□□□□□ -1.93
HOXC13P31276 AC027807.2-201ENST00000616099 408 ntBASIC3.01□□□□□ -1.93
HOXC13P31276 uc_338.12-201ENST00000616344 181 ntBASIC3.01□□□□□ -1.93
HOXC13P31276 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.01□□□□□ -1.93
HOXC13P31276 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.01□□□□□ -1.93
HOXC13P31276 AC112487.2-201ENST00000637950 304 ntBASIC3.01□□□□□ -1.93
HOXC13P31276 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.01□□□□□ -1.93
HOXC13P31276 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.01□□□□□ -1.93
HOXC13P31276 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
HOXC13P31276 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
HOXC13P31276 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HOXC13P31276 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3□□□□□ -1.93
HOXC13P31276 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
HOXC13P31276 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HOXC13P31276 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3□□□□□ -1.93
HOXC13P31276 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3□□□□□ -1.93
HOXC13P31276 RNU4-73P-201ENST00000363164 141 ntBASIC3□□□□□ -1.93
HOXC13P31276 SNORA63-201ENST00000363450 132 ntBASIC3□□□□□ -1.93
HOXC13P31276 SNORA40.3-201ENST00000390964 122 ntBASIC3□□□□□ -1.93
HOXC13P31276 RPS4XP8-201ENST00000402039 771 ntBASIC3□□□□□ -1.93
HOXC13P31276 RNA5SP184-201ENST00000411071 108 ntBASIC3□□□□□ -1.93
HOXC13P31276 RNA5SP344-201ENST00000411081 104 ntBASIC3□□□□□ -1.93
HOXC13P31276 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3□□□□□ -1.93
HOXC13P31276 RPL21P111-201ENST00000418453 477 ntBASIC3□□□□□ -1.93
HOXC13P31276 ZNF90P2-204ENST00000419323 1075 ntBASIC3□□□□□ -1.93
HOXC13P31276 AC093019.1-201ENST00000443135 252 ntBASIC3□□□□□ -1.93
HOXC13P31276 AL590365.1-201ENST00000450788 243 ntBASIC3□□□□□ -1.93
HOXC13P31276 CECR9-201ENST00000453421 199 ntBASIC3□□□□□ -1.93
HOXC13P31276 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3□□□□□ -1.93
HOXC13P31276 SNORD97-201ENST00000459187 142 ntBASIC3□□□□□ -1.93
HOXC13P31276 RBM43P1-201ENST00000476891 1081 ntBASIC3□□□□□ -1.93
HOXC13P31276 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3□□□□□ -1.93
HOXC13P31276 LRRC34P2-201ENST00000514850 553 ntBASIC3□□□□□ -1.93
HOXC13P31276 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3□□□□□ -1.93
HOXC13P31276 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3□□□□□ -1.93
HOXC13P31276 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3□□□□□ -1.93
HOXC13P31276 OR5AQ1P-201ENST00000527596 927 ntBASIC3□□□□□ -1.93
HOXC13P31276 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3□□□□□ -1.93
HOXC13P31276 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3□□□□□ -1.93
HOXC13P31276 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3□□□□□ -1.93
HOXC13P31276 AC024153.1-201ENST00000603103 365 ntBASIC3□□□□□ -1.93
HOXC13P31276 AL356280.1-201ENST00000603614 379 ntBASIC3□□□□□ -1.93
HOXC13P31276 AP000942.4-201ENST00000604811 241 ntBASIC3□□□□□ -1.93
HOXC13P31276 AC008536.2-201ENST00000607284 349 ntBASIC3□□□□□ -1.93
HOXC13P31276 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3□□□□□ -1.93
HOXC13P31276 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3□□□□□ -1.93
HOXC13P31276 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3□□□□□ -1.93
HOXC13P31276 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3□□□□□ -1.93
HOXC13P31276 AC243829.7-201ENST00000633081 225 ntBASIC3□□□□□ -1.93
HOXC13P31276 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3□□□□□ -1.93
HOXC13P31276 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3□□□□□ -1.93
HOXC13P31276 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HOXC13P31276 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3□□□□□ -1.93
HOXC13P31276 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3□□□□□ -1.93
HOXC13P31276 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3□□□□□ -1.93
HOXC13P31276 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
HOXC13P31276 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
HOXC13P31276 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
HOXC13P31276 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.99□□□□□ -1.93
HOXC13P31276 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.99□□□□□ -1.93
HOXC13P31276 UBE2L2-201ENST00000254302 429 ntBASIC2.99□□□□□ -1.93
HOXC13P31276 RNY4P14-201ENST00000363656 96 ntBASIC2.99□□□□□ -1.93
HOXC13P31276 Y_RNA.263-201ENST00000364659 114 ntBASIC2.99□□□□□ -1.93
HOXC13P31276 Y_RNA.295-201ENST00000364918 102 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms