Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.33□□□□□ -1.88
EPHA3P29320 AC100830.2-201ENST00000581636 240 ntBASIC3.33□□□□□ -1.88
EPHA3P29320 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.33□□□□□ -1.88
EPHA3P29320 AC008962.1-201ENST00000605729 304 ntBASIC3.33□□□□□ -1.88
EPHA3P29320 AC064836.2-201ENST00000609491 462 ntBASIC3.33□□□□□ -1.88
EPHA3P29320 AC084781.2-201ENST00000615568 161 ntBASIC3.33□□□□□ -1.88
EPHA3P29320 AC126177.8-201ENST00000618339 1015 ntBASIC3.33□□□□□ -1.88
EPHA3P29320 AC034229.5-201ENST00000624258 185 ntBASIC3.33□□□□□ -1.88
EPHA3P29320 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
EPHA3P29320 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.33□□□□□ -1.88
EPHA3P29320 FAM35BP-202ENST00000497389 3337 ntBASIC3.32□□□□□ -1.88
EPHA3P29320 AC093908.1-201ENST00000623125 8092 ntBASIC3.32□□□□□ -1.88
EPHA3P29320 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
EPHA3P29320 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.32□□□□□ -1.88
EPHA3P29320 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
EPHA3P29320 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.32□□□□□ -1.88
EPHA3P29320 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
EPHA3P29320 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
EPHA3P29320 SNORD56.3-201ENST00000363507 71 ntBASIC3.32□□□□□ -1.88
EPHA3P29320 RNA5SP51-201ENST00000364750 119 ntBASIC3.32□□□□□ -1.88
EPHA3P29320 RNU6-1035P-201ENST00000384477 107 ntBASIC3.32□□□□□ -1.88
EPHA3P29320 AL445529.1-201ENST00000398713 389 ntBASIC3.32□□□□□ -1.88
EPHA3P29320 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.32□□□□□ -1.88
EPHA3P29320 AL353729.1-201ENST00000425044 720 ntBASIC3.32□□□□□ -1.88
EPHA3P29320 RPL7P2-201ENST00000427639 268 ntBASIC3.32□□□□□ -1.88
EPHA3P29320 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.32□□□□□ -1.88
EPHA3P29320 CEACAMP4-201ENST00000457676 421 ntBASIC3.32□□□□□ -1.88
EPHA3P29320 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
EPHA3P29320 RNU6-703P-201ENST00000516946 107 ntBASIC3.32□□□□□ -1.88
EPHA3P29320 Y_RNA.718-201ENST00000517110 102 ntBASIC3.32□□□□□ -1.88
EPHA3P29320 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.32□□□□□ -1.88
EPHA3P29320 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.32□□□□□ -1.88
EPHA3P29320 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.32□□□□□ -1.88
EPHA3P29320 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.32□□□□□ -1.88
EPHA3P29320 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.32□□□□□ -1.88
EPHA3P29320 AMZ2P1-203ENST00000565833 850 ntBASIC3.32□□□□□ -1.88
EPHA3P29320 HSPE1P7-201ENST00000604681 321 ntBASIC3.32□□□□□ -1.88
EPHA3P29320 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
EPHA3P29320 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.32□□□□□ -1.88
EPHA3P29320 AC010378.1-201ENST00000619270 362 ntBASIC3.32□□□□□ -1.88
EPHA3P29320 U2.21-201ENST00000637295 81 ntBASIC3.32□□□□□ -1.88
EPHA3P29320 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
EPHA3P29320 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.32□□□□□ -1.88
EPHA3P29320 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.32□□□□□ -1.88
EPHA3P29320 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
EPHA3P29320 MFSD8-233ENST00000641482 4860 ntBASIC3.31□□□□□ -1.88
EPHA3P29320 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.31□□□□□ -1.88
EPHA3P29320 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.31□□□□□ -1.88
EPHA3P29320 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.31□□□□□ -1.88
EPHA3P29320 MIR148B-201ENST00000362252 99 ntBASIC3.31□□□□□ -1.88
EPHA3P29320 RNU6-778P-201ENST00000363269 103 ntBASIC3.31□□□□□ -1.88
EPHA3P29320 Y_RNA.431-201ENST00000384086 102 ntBASIC3.31□□□□□ -1.88
EPHA3P29320 Y_RNA.473-201ENST00000384333 102 ntBASIC3.31□□□□□ -1.88
EPHA3P29320 RNU6-306P-201ENST00000384617 107 ntBASIC3.31□□□□□ -1.88
EPHA3P29320 RNY4P36-201ENST00000391116 96 ntBASIC3.31□□□□□ -1.88
EPHA3P29320 AC245291.1-201ENST00000419501 328 ntBASIC3.31□□□□□ -1.88
EPHA3P29320 MTCO2P27-201ENST00000420740 428 ntBASIC3.31□□□□□ -1.88
EPHA3P29320 AC099548.1-201ENST00000421443 426 ntBASIC3.31□□□□□ -1.88
EPHA3P29320 AF228730.4-201ENST00000421457 183 ntBASIC3.31□□□□□ -1.88
EPHA3P29320 HMGN2P30-201ENST00000423237 256 ntBASIC3.31□□□□□ -1.88
EPHA3P29320 AC093151.1-201ENST00000427711 313 ntBASIC3.31□□□□□ -1.88
EPHA3P29320 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.31□□□□□ -1.88
EPHA3P29320 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.31□□□□□ -1.88
EPHA3P29320 RNU7-187P-201ENST00000458985 68 ntBASIC3.31□□□□□ -1.88
EPHA3P29320 SNRPGP3-201ENST00000469405 227 ntBASIC3.31□□□□□ -1.88
EPHA3P29320 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.31□□□□□ -1.88
EPHA3P29320 UBE2CP3-201ENST00000502715 450 ntBASIC3.31□□□□□ -1.88
EPHA3P29320 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
EPHA3P29320 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.31□□□□□ -1.88
EPHA3P29320 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.31□□□□□ -1.88
EPHA3P29320 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
EPHA3P29320 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.31□□□□□ -1.88
EPHA3P29320 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.31□□□□□ -1.88
EPHA3P29320 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.31□□□□□ -1.88
EPHA3P29320 CYCSP39-201ENST00000565821 309 ntBASIC3.31□□□□□ -1.88
EPHA3P29320 AC106785.1-201ENST00000565935 262 ntBASIC3.31□□□□□ -1.88
EPHA3P29320 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.31□□□□□ -1.88
EPHA3P29320 MIR4782-201ENST00000577987 79 ntBASIC3.31□□□□□ -1.88
EPHA3P29320 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.31□□□□□ -1.88
EPHA3P29320 AL645944.1-201ENST00000603857 493 ntBASIC3.31□□□□□ -1.88
EPHA3P29320 AC002076.2-201ENST00000617362 122 ntBASIC3.31□□□□□ -1.88
EPHA3P29320 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
EPHA3P29320 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
EPHA3P29320 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
EPHA3P29320 SRP72P2-201ENST00000344851 1979 ntBASIC3.31□□□□□ -1.88
EPHA3P29320 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
EPHA3P29320 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
EPHA3P29320 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.3□□□□□ -1.88
EPHA3P29320 AC022336.2-201ENST00000568966 2538 ntBASIC3.3□□□□□ -1.88
EPHA3P29320 AL021368.2-201ENST00000606125 5352 ntBASIC3.3□□□□□ -1.88
EPHA3P29320 SNORD6-201ENST00000365444 73 ntBASIC3.3□□□□□ -1.88
EPHA3P29320 Z98749.2-208ENST00000381646 500 ntBASIC3.3□□□□□ -1.88
EPHA3P29320 RNU1-73P-201ENST00000383971 164 ntBASIC3.3□□□□□ -1.88
EPHA3P29320 Y_RNA.482-201ENST00000384377 111 ntBASIC3.3□□□□□ -1.88
EPHA3P29320 U8.11-201ENST00000384699 133 ntBASIC3.3□□□□□ -1.88
EPHA3P29320 U8.12-201ENST00000384701 133 ntBASIC3.3□□□□□ -1.88
EPHA3P29320 MIR34A-201ENST00000385130 110 ntBASIC3.3□□□□□ -1.88
EPHA3P29320 Y_RNA.579-201ENST00000390939 94 ntBASIC3.3□□□□□ -1.88
EPHA3P29320 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.3□□□□□ -1.88
EPHA3P29320 AL354751.2-201ENST00000415471 210 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms