Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.96□□□□□ -1.62
RFX1P22670 AC141273.2-201ENST00000618989 130 ntBASIC4.96□□□□□ -1.62
RFX1P22670 AC097372.5-201ENST00000623665 376 ntBASIC4.96□□□□□ -1.62
RFX1P22670 AC008785.1-201ENST00000624475 456 ntBASIC4.96□□□□□ -1.62
RFX1P22670 U3.53-201ENST00000628922 216 ntBASIC4.96□□□□□ -1.62
RFX1P22670 AL133383.2-201ENST00000622958 2336 ntBASIC4.96□□□□□ -1.62
RFX1P22670 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RFX1P22670 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
RFX1P22670 MFSD8-242ENST00000641690 4199 ntBASIC4.95□□□□□ -1.62
RFX1P22670 RNA5SP509-201ENST00000364577 119 ntBASIC4.95□□□□□ -1.62
RFX1P22670 RNU6-17P-201ENST00000384245 107 ntBASIC4.95□□□□□ -1.62
RFX1P22670 RNU6-18P-201ENST00000384527 107 ntBASIC4.95□□□□□ -1.62
RFX1P22670 RNU6-1093P-201ENST00000391194 107 ntBASIC4.95□□□□□ -1.62
RFX1P22670 RNU2-37P-201ENST00000410695 177 ntBASIC4.95□□□□□ -1.62
RFX1P22670 RN7SKP53-201ENST00000411337 315 ntBASIC4.95□□□□□ -1.62
RFX1P22670 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.95□□□□□ -1.62
RFX1P22670 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.95□□□□□ -1.62
RFX1P22670 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.95□□□□□ -1.62
RFX1P22670 AC007969.2-201ENST00000441891 191 ntBASIC4.95□□□□□ -1.62
RFX1P22670 AL031659.1-201ENST00000447075 539 ntBASIC4.95□□□□□ -1.62
RFX1P22670 HMGN2P10-201ENST00000448085 265 ntBASIC4.95□□□□□ -1.62
RFX1P22670 TRBVB-201ENST00000477100 408 ntBASIC4.95□□□□□ -1.62
RFX1P22670 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.95□□□□□ -1.62
RFX1P22670 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.95□□□□□ -1.62
RFX1P22670 MRPS36P4-201ENST00000534436 298 ntBASIC4.95□□□□□ -1.62
RFX1P22670 AC090617.3-201ENST00000573670 475 ntBASIC4.95□□□□□ -1.62
RFX1P22670 AL451007.1-201ENST00000595491 289 ntBASIC4.95□□□□□ -1.62
RFX1P22670 RPL23AP88-201ENST00000605759 454 ntBASIC4.95□□□□□ -1.62
RFX1P22670 RMST_6.1-201ENST00000611980 203 ntBASIC4.95□□□□□ -1.62
RFX1P22670 AC011944.2-201ENST00000624440 683 ntBASIC4.95□□□□□ -1.62
RFX1P22670 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.95□□□□□ -1.62
RFX1P22670 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
RFX1P22670 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RFX1P22670 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
RFX1P22670 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
RFX1P22670 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.95□□□□□ -1.62
RFX1P22670 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
RFX1P22670 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RFX1P22670 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
RFX1P22670 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.95□□□□□ -1.62
RFX1P22670 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.94□□□□□ -1.62
RFX1P22670 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.94□□□□□ -1.62
RFX1P22670 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RFX1P22670 MTND5P6-201ENST00000422338 1798 ntBASIC4.94□□□□□ -1.62
RFX1P22670 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.94□□□□□ -1.62
RFX1P22670 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.94□□□□□ -1.62
RFX1P22670 RNU1-94P-201ENST00000362627 173 ntBASIC4.94□□□□□ -1.62
RFX1P22670 RNU6-270P-201ENST00000364131 105 ntBASIC4.94□□□□□ -1.62
RFX1P22670 RN7SKP280-201ENST00000364196 304 ntBASIC4.94□□□□□ -1.62
RFX1P22670 SNORD116-20-201ENST00000384529 92 ntBASIC4.94□□□□□ -1.62
RFX1P22670 RPL21P38-201ENST00000418090 167 ntBASIC4.94□□□□□ -1.62
RFX1P22670 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.94□□□□□ -1.62
RFX1P22670 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.94□□□□□ -1.62
RFX1P22670 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.94□□□□□ -1.62
RFX1P22670 RPL21P40-201ENST00000428586 483 ntBASIC4.94□□□□□ -1.62
RFX1P22670 RPL23AP25-201ENST00000430973 463 ntBASIC4.94□□□□□ -1.62
RFX1P22670 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.94□□□□□ -1.62
RFX1P22670 Z82188.1-201ENST00000436709 154 ntBASIC4.94□□□□□ -1.62
RFX1P22670 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.94□□□□□ -1.62
RFX1P22670 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.94□□□□□ -1.62
RFX1P22670 RPS26P21-201ENST00000475397 348 ntBASIC4.94□□□□□ -1.62
RFX1P22670 IGLVIV-65-201ENST00000517313 360 ntBASIC4.94□□□□□ -1.62
RFX1P22670 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.94□□□□□ -1.62
RFX1P22670 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.94□□□□□ -1.62
RFX1P22670 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.94□□□□□ -1.62
RFX1P22670 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.94□□□□□ -1.62
RFX1P22670 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.94□□□□□ -1.62
RFX1P22670 AC020895.1-201ENST00000595362 272 ntBASIC4.94□□□□□ -1.62
RFX1P22670 ZYXP1-201ENST00000617638 118 ntBASIC4.94□□□□□ -1.62
RFX1P22670 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.94□□□□□ -1.62
RFX1P22670 AC048347.1-201ENST00000624621 427 ntBASIC4.94□□□□□ -1.62
RFX1P22670 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.94□□□□□ -1.62
RFX1P22670 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.94□□□□□ -1.62
RFX1P22670 HAUS6P2-201ENST00000433254 2404 ntBASIC4.94□□□□□ -1.62
RFX1P22670 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.93□□□□□ -1.62
RFX1P22670 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
RFX1P22670 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RFX1P22670 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.93□□□□□ -1.62
RFX1P22670 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.93□□□□□ -1.62
RFX1P22670 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.93□□□□□ -1.62
RFX1P22670 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
RFX1P22670 RNU6-212P-201ENST00000362642 104 ntBASIC4.93□□□□□ -1.62
RFX1P22670 Y_RNA.60-201ENST00000362831 98 ntBASIC4.93□□□□□ -1.62
RFX1P22670 SNORA20.1-201ENST00000364790 130 ntBASIC4.93□□□□□ -1.62
RFX1P22670 SNORD32A-201ENST00000364805 84 ntBASIC4.93□□□□□ -1.62
RFX1P22670 AC011998.1-201ENST00000433403 117 ntBASIC4.93□□□□□ -1.62
RFX1P22670 BX679664.1-201ENST00000434429 253 ntBASIC4.93□□□□□ -1.62
RFX1P22670 SNRPGP5-201ENST00000456003 220 ntBASIC4.93□□□□□ -1.62
RFX1P22670 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RFX1P22670 RPL26P9-201ENST00000457466 433 ntBASIC4.93□□□□□ -1.62
RFX1P22670 U8.22-201ENST00000459141 133 ntBASIC4.93□□□□□ -1.62
RFX1P22670 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.93□□□□□ -1.62
RFX1P22670 AC098869.1-201ENST00000481627 292 ntBASIC4.93□□□□□ -1.62
RFX1P22670 RN7SL604P-201ENST00000492589 296 ntBASIC4.93□□□□□ -1.62
RFX1P22670 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.93□□□□□ -1.62
RFX1P22670 AC110491.1-201ENST00000562191 2010 ntBASIC4.93□□□□□ -1.62
RFX1P22670 AC233702.9-201ENST00000581528 203 ntBASIC4.93□□□□□ -1.62
RFX1P22670 MIR3609-201ENST00000582661 80 ntBASIC4.93□□□□□ -1.62
RFX1P22670 AC010928.2-201ENST00000588017 287 ntBASIC4.93□□□□□ -1.62
RFX1P22670 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms