Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 RNU6-1092P-201ENST00000516955 87 ntBASIC1.78□□□□□ -2.12
USF1P22415 RNU6-1315P-201ENST00000517187 99 ntBASIC1.78□□□□□ -2.12
USF1P22415 MTND2P7-201ENST00000521337 640 ntBASIC1.78□□□□□ -2.12
USF1P22415 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.78□□□□□ -2.12
USF1P22415 AC123904.2-201ENST00000548059 300 ntBASIC1.78□□□□□ -2.12
USF1P22415 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.78□□□□□ -2.12
USF1P22415 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.78□□□□□ -2.12
USF1P22415 AC008749.1-201ENST00000597650 306 ntBASIC1.78□□□□□ -2.12
USF1P22415 AL031281.1-201ENST00000604049 488 ntBASIC1.78□□□□□ -2.12
USF1P22415 APOOP1-201ENST00000604695 592 ntBASIC1.78□□□□□ -2.12
USF1P22415 AL355297.2-201ENST00000604792 129 ntBASIC1.78□□□□□ -2.12
USF1P22415 AP000860.1-201ENST00000605250 559 ntBASIC1.78□□□□□ -2.12
USF1P22415 AC144521.1-201ENST00000607148 956 ntBASIC1.78□□□□□ -2.12
USF1P22415 AC022893.3-201ENST00000607665 437 ntBASIC1.78□□□□□ -2.12
USF1P22415 AL391813.2-201ENST00000609113 322 ntBASIC1.78□□□□□ -2.12
USF1P22415 AC108747.1-201ENST00000609508 535 ntBASIC1.78□□□□□ -2.12
USF1P22415 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.78□□□□□ -2.12
USF1P22415 AL160394.1-201ENST00000624765 724 ntBASIC1.78□□□□□ -2.12
USF1P22415 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.78□□□□□ -2.12
USF1P22415 CENPCP1-201ENST00000533085 2578 ntBASIC1.77□□□□□ -2.13
USF1P22415 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
USF1P22415 ZNF876P-202ENST00000398732 1485 ntBASIC1.77□□□□□ -2.13
USF1P22415 SNORA4.3-201ENST00000365564 137 ntBASIC1.77□□□□□ -2.13
USF1P22415 RNU5E-6P-201ENST00000365574 115 ntBASIC1.77□□□□□ -2.13
USF1P22415 MIR518D-201ENST00000385014 87 ntBASIC1.77□□□□□ -2.13
USF1P22415 SNORA40C-201ENST00000391285 128 ntBASIC1.77□□□□□ -2.13
USF1P22415 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.77□□□□□ -2.13
USF1P22415 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.77□□□□□ -2.13
USF1P22415 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.77□□□□□ -2.13
USF1P22415 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.77□□□□□ -2.13
USF1P22415 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.77□□□□□ -2.13
USF1P22415 AL445646.1-201ENST00000431784 216 ntBASIC1.77□□□□□ -2.13
USF1P22415 HSFY7P-201ENST00000432672 318 ntBASIC1.77□□□□□ -2.13
USF1P22415 HSFY8P-201ENST00000437934 318 ntBASIC1.77□□□□□ -2.13
USF1P22415 HMGB1P18-201ENST00000438801 619 ntBASIC1.77□□□□□ -2.13
USF1P22415 HSFY5P-201ENST00000453726 309 ntBASIC1.77□□□□□ -2.13
USF1P22415 AC093899.1-201ENST00000457984 376 ntBASIC1.77□□□□□ -2.13
USF1P22415 AL139824.2-201ENST00000458731 1095 ntBASIC1.77□□□□□ -2.13
USF1P22415 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
USF1P22415 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.77□□□□□ -2.13
USF1P22415 AC117522.2-201ENST00000510049 657 ntBASIC1.77□□□□□ -2.13
USF1P22415 RNU2-10P-201ENST00000516375 211 ntBASIC1.77□□□□□ -2.13
USF1P22415 RNU6-914P-201ENST00000516749 109 ntBASIC1.77□□□□□ -2.13
USF1P22415 RNU6-295P-201ENST00000516901 104 ntBASIC1.77□□□□□ -2.13
USF1P22415 RNA5SP364-201ENST00000516938 78 ntBASIC1.77□□□□□ -2.13
USF1P22415 SNORA31.25-201ENST00000517242 134 ntBASIC1.77□□□□□ -2.13
USF1P22415 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.77□□□□□ -2.13
USF1P22415 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.77□□□□□ -2.13
USF1P22415 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.77□□□□□ -2.13
USF1P22415 AC090888.2-201ENST00000559765 1144 ntBASIC1.77□□□□□ -2.13
USF1P22415 AC012435.1-202ENST00000568772 240 ntBASIC1.77□□□□□ -2.13
USF1P22415 TMF1P1-201ENST00000576058 373 ntBASIC1.77□□□□□ -2.13
USF1P22415 LRRC37A5P-203ENST00000580181 585 ntBASIC1.77□□□□□ -2.13
USF1P22415 AC009977.1-201ENST00000586015 570 ntBASIC1.77□□□□□ -2.13
USF1P22415 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.77□□□□□ -2.13
USF1P22415 AL670379.10-201ENST00000604330 253 ntBASIC1.77□□□□□ -2.13
USF1P22415 AC121334.2-201ENST00000605387 271 ntBASIC1.77□□□□□ -2.13
USF1P22415 AL670379.9-201ENST00000605428 253 ntBASIC1.77□□□□□ -2.13
USF1P22415 AC009318.2-201ENST00000610917 651 ntBASIC1.77□□□□□ -2.13
USF1P22415 AC093591.3-201ENST00000634516 308 ntBASIC1.77□□□□□ -2.13
USF1P22415 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
USF1P22415 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
USF1P22415 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.77□□□□□ -2.13
USF1P22415 KPNA2P1-201ENST00000458289 1591 ntBASIC1.76□□□□□ -2.13
USF1P22415 AC092104.1-201ENST00000497346 1441 ntBASIC1.76□□□□□ -2.13
USF1P22415 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.76□□□□□ -2.13
USF1P22415 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
USF1P22415 RNU6-1159P-201ENST00000362933 107 ntBASIC1.76□□□□□ -2.13
USF1P22415 RNU1-72P-201ENST00000362976 153 ntBASIC1.76□□□□□ -2.13
USF1P22415 RNU6-960P-201ENST00000364056 120 ntBASIC1.76□□□□□ -2.13
USF1P22415 CIR1P3-201ENST00000405137 479 ntBASIC1.76□□□□□ -2.13
USF1P22415 SSR1P2-201ENST00000415208 787 ntBASIC1.76□□□□□ -2.13
USF1P22415 AC005005.2-201ENST00000420779 380 ntBASIC1.76□□□□□ -2.13
USF1P22415 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.76□□□□□ -2.13
USF1P22415 AL161788.1-201ENST00000441805 169 ntBASIC1.76□□□□□ -2.13
USF1P22415 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.76□□□□□ -2.13
USF1P22415 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.76□□□□□ -2.13
USF1P22415 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.76□□□□□ -2.13
USF1P22415 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.76□□□□□ -2.13
USF1P22415 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.76□□□□□ -2.13
USF1P22415 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.76□□□□□ -2.13
USF1P22415 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.76□□□□□ -2.13
USF1P22415 AC109927.2-201ENST00000506416 303 ntBASIC1.76□□□□□ -2.13
USF1P22415 RNU6-991P-201ENST00000516168 107 ntBASIC1.76□□□□□ -2.13
USF1P22415 RNA5SP458-201ENST00000516188 119 ntBASIC1.76□□□□□ -2.13
USF1P22415 AL157871.3-201ENST00000557231 293 ntBASIC1.76□□□□□ -2.13
USF1P22415 MIR3126-201ENST00000577443 74 ntBASIC1.76□□□□□ -2.13
USF1P22415 MIR1273C-201ENST00000578669 77 ntBASIC1.76□□□□□ -2.13
USF1P22415 AC103710.2-201ENST00000609912 942 ntBASIC1.76□□□□□ -2.13
USF1P22415 AL031667.3-201ENST00000620124 655 ntBASIC1.76□□□□□ -2.13
USF1P22415 AP002782.1-201ENST00000623107 614 ntBASIC1.76□□□□□ -2.13
USF1P22415 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.76□□□□□ -2.13
USF1P22415 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
USF1P22415 Y_RNA.97-201ENST00000363094 102 ntBASIC1.75□□□□□ -2.13
USF1P22415 RNU6-1200P-201ENST00000384162 107 ntBASIC1.75□□□□□ -2.13
USF1P22415 RNU6-166P-201ENST00000384371 107 ntBASIC1.75□□□□□ -2.13
USF1P22415 MIR95-201ENST00000385072 81 ntBASIC1.75□□□□□ -2.13
USF1P22415 MIR513B-201ENST00000385136 84 ntBASIC1.75□□□□□ -2.13
USF1P22415 SNORA26.9-201ENST00000391322 122 ntBASIC1.75□□□□□ -2.13
USF1P22415 RNU6-1025P-201ENST00000410629 104 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms