Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
PTPN1P18031 RNA5SP171-201ENST00000391071 115 ntBASIC3.95□□□□□ -1.78
PTPN1P18031 RPL21P17-201ENST00000397467 475 ntBASIC3.95□□□□□ -1.78
PTPN1P18031 Y_RNA.623-201ENST00000411128 95 ntBASIC3.95□□□□□ -1.78
PTPN1P18031 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.95□□□□□ -1.78
PTPN1P18031 AL035423.1-201ENST00000420331 213 ntBASIC3.95□□□□□ -1.78
PTPN1P18031 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.95□□□□□ -1.78
PTPN1P18031 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.95□□□□□ -1.78
PTPN1P18031 CECR9-201ENST00000453421 199 ntBASIC3.95□□□□□ -1.78
PTPN1P18031 AL583843.1-201ENST00000456070 346 ntBASIC3.95□□□□□ -1.78
PTPN1P18031 RNU6-1037P-201ENST00000459571 107 ntBASIC3.95□□□□□ -1.78
PTPN1P18031 RPL9P32-201ENST00000464118 620 ntBASIC3.95□□□□□ -1.78
PTPN1P18031 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.95□□□□□ -1.78
PTPN1P18031 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PTPN1P18031 AC025755.1-201ENST00000521306 278 ntBASIC3.95□□□□□ -1.78
PTPN1P18031 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.95□□□□□ -1.78
PTPN1P18031 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.95□□□□□ -1.78
PTPN1P18031 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.95□□□□□ -1.78
PTPN1P18031 RNU6-6P-201ENST00000606623 107 ntBASIC3.95□□□□□ -1.78
PTPN1P18031 AL713922.2-201ENST00000619384 716 ntBASIC3.95□□□□□ -1.78
PTPN1P18031 AC119674.1-207ENST00000641355 633 ntBASIC3.95□□□□□ -1.78
PTPN1P18031 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PTPN1P18031 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.95□□□□□ -1.78
PTPN1P18031 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PTPN1P18031 AL359693.1-201ENST00000614959 2407 ntBASIC3.95□□□□□ -1.78
PTPN1P18031 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.95□□□□□ -1.78
PTPN1P18031 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
PTPN1P18031 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
PTPN1P18031 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.94□□□□□ -1.78
PTPN1P18031 AP001486.2-201ENST00000561652 5113 ntBASIC3.94□□□□□ -1.78
PTPN1P18031 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PTPN1P18031 HMGB3P2-201ENST00000411913 584 ntBASIC3.94□□□□□ -1.78
PTPN1P18031 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.94□□□□□ -1.78
PTPN1P18031 MRPS18CP6-201ENST00000423587 223 ntBASIC3.94□□□□□ -1.78
PTPN1P18031 TOMM20P4-201ENST00000427861 435 ntBASIC3.94□□□□□ -1.78
PTPN1P18031 AC006946.1-201ENST00000429106 328 ntBASIC3.94□□□□□ -1.78
PTPN1P18031 AC096644.2-201ENST00000429278 159 ntBASIC3.94□□□□□ -1.78
PTPN1P18031 AL627311.1-201ENST00000431514 115 ntBASIC3.94□□□□□ -1.78
PTPN1P18031 AL031274.1-201ENST00000450334 232 ntBASIC3.94□□□□□ -1.78
PTPN1P18031 AC091153.1-201ENST00000466297 402 ntBASIC3.94□□□□□ -1.78
PTPN1P18031 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.94□□□□□ -1.78
PTPN1P18031 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.94□□□□□ -1.78
PTPN1P18031 TRAV28-201ENST00000557548 323 ntBASIC3.94□□□□□ -1.78
PTPN1P18031 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.94□□□□□ -1.78
PTPN1P18031 MIR4444-1-201ENST00000581696 74 ntBASIC3.94□□□□□ -1.78
PTPN1P18031 MIR4444-2-201ENST00000584390 74 ntBASIC3.94□□□□□ -1.78
PTPN1P18031 AP000787.2-201ENST00000604432 568 ntBASIC3.94□□□□□ -1.78
PTPN1P18031 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.94□□□□□ -1.78
PTPN1P18031 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PTPN1P18031 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
PTPN1P18031 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.94□□□□□ -1.78
PTPN1P18031 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.94□□□□□ -1.78
PTPN1P18031 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PTPN1P18031 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.94□□□□□ -1.78
PTPN1P18031 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.94□□□□□ -1.78
PTPN1P18031 MAPK10-372ENST00000641954 3413 ntBASIC3.93□□□□□ -1.78
PTPN1P18031 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PTPN1P18031 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.93□□□□□ -1.78
PTPN1P18031 Y_RNA.149-201ENST00000363558 117 ntBASIC3.93□□□□□ -1.78
PTPN1P18031 RNA5SP51-201ENST00000364750 119 ntBASIC3.93□□□□□ -1.78
PTPN1P18031 SNORA5A-201ENST00000384111 134 ntBASIC3.93□□□□□ -1.78
PTPN1P18031 MIR200C-201ENST00000384980 68 ntBASIC3.93□□□□□ -1.78
PTPN1P18031 MIR10A-201ENST00000385043 110 ntBASIC3.93□□□□□ -1.78
PTPN1P18031 MIR670-201ENST00000390142 98 ntBASIC3.93□□□□□ -1.78
PTPN1P18031 Y_RNA.645-201ENST00000391229 102 ntBASIC3.93□□□□□ -1.78
PTPN1P18031 AL513475.1-201ENST00000406602 315 ntBASIC3.93□□□□□ -1.78
PTPN1P18031 RNU2-23P-201ENST00000410545 195 ntBASIC3.93□□□□□ -1.78
PTPN1P18031 SNORD56-201ENST00000413522 71 ntBASIC3.93□□□□□ -1.78
PTPN1P18031 PGBD4P6-201ENST00000421501 610 ntBASIC3.93□□□□□ -1.78
PTPN1P18031 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.93□□□□□ -1.78
PTPN1P18031 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.93□□□□□ -1.78
PTPN1P18031 AC009237.8-201ENST00000445492 379 ntBASIC3.93□□□□□ -1.78
PTPN1P18031 BTF3L4P4-201ENST00000506381 449 ntBASIC3.93□□□□□ -1.78
PTPN1P18031 RNU6-475P-201ENST00000516073 104 ntBASIC3.93□□□□□ -1.78
PTPN1P18031 AC008011.1-201ENST00000545989 227 ntBASIC3.93□□□□□ -1.78
PTPN1P18031 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.93□□□□□ -1.78
PTPN1P18031 CPDP1-201ENST00000579660 283 ntBASIC3.93□□□□□ -1.78
PTPN1P18031 MIR4273-201ENST00000582824 84 ntBASIC3.93□□□□□ -1.78
PTPN1P18031 MIR3149-201ENST00000584629 83 ntBASIC3.93□□□□□ -1.78
PTPN1P18031 AC104695.3-201ENST00000604052 296 ntBASIC3.93□□□□□ -1.78
PTPN1P18031 BRDTP1-201ENST00000605735 677 ntBASIC3.93□□□□□ -1.78
PTPN1P18031 Z69720.2-201ENST00000624755 279 ntBASIC3.93□□□□□ -1.78
PTPN1P18031 AC138305.3-201ENST00000624988 240 ntBASIC3.93□□□□□ -1.78
PTPN1P18031 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.93□□□□□ -1.78
PTPN1P18031 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
PTPN1P18031 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.93□□□□□ -1.78
PTPN1P18031 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
PTPN1P18031 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.93□□□□□ -1.78
PTPN1P18031 AC007785.2-201ENST00000598627 1916 ntBASIC3.93□□□□□ -1.78
PTPN1P18031 CDC27P3-201ENST00000635418 1910 ntBASIC3.93□□□□□ -1.78
PTPN1P18031 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.93□□□□□ -1.78
PTPN1P18031 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.93□□□□□ -1.78
PTPN1P18031 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PTPN1P18031 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PTPN1P18031 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
PTPN1P18031 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PTPN1P18031 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PTPN1P18031 Y_RNA.452-201ENST00000384202 108 ntBASIC3.92□□□□□ -1.78
PTPN1P18031 MIR607-201ENST00000385241 96 ntBASIC3.92□□□□□ -1.78
PTPN1P18031 SNORA40C-201ENST00000391285 128 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms