Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 AC010469.2-201ENST00000496412 480 ntBASIC-0.12□□□□□ -2.43
VCANP13611 RN7SKP12-201ENST00000516275 143 ntBASIC-0.12□□□□□ -2.43
VCANP13611 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
VCANP13611 AC087897.1-201ENST00000550134 156 ntBASIC-0.12□□□□□ -2.43
VCANP13611 AL355877.2-201ENST00000603670 358 ntBASIC-0.12□□□□□ -2.43
VCANP13611 AL513185.3-201ENST00000433335 1300 ntBASIC-0.12□□□□□ -2.43
VCANP13611 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
VCANP13611 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC-0.12□□□□□ -2.43
VCANP13611 RNU6-362P-201ENST00000516736 90 ntBASIC-0.12□□□□□ -2.43
VCANP13611 AC105224.1-201ENST00000587055 421 ntBASIC-0.12□□□□□ -2.43
VCANP13611 AC100812.1-201ENST00000607622 580 ntBASIC-0.12□□□□□ -2.43
VCANP13611 MTND5P32-201ENST00000560711 1802 ntBASIC-0.12□□□□□ -2.43
VCANP13611 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC-0.12□□□□□ -2.43
VCANP13611 HMGN2P16-201ENST00000456802 261 ntBASIC-0.12□□□□□ -2.43
VCANP13611 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC-0.12□□□□□ -2.43
VCANP13611 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC-0.12□□□□□ -2.43
VCANP13611 HMGB1P29-201ENST00000505659 499 ntBASIC-0.12□□□□□ -2.43
VCANP13611 RNU7-193P-201ENST00000516723 65 ntBASIC-0.12□□□□□ -2.43
VCANP13611 RNA5SP404-201ENST00000517118 132 ntBASIC-0.12□□□□□ -2.43
VCANP13611 RNU6-302P-201ENST00000365249 107 ntBASIC-0.13□□□□□ -2.43
VCANP13611 MORN2-203ENST00000409131 544 ntTSL 5 BASIC-0.13□□□□□ -2.43
VCANP13611 MTND1P16-201ENST00000465177 898 ntBASIC-0.13□□□□□ -2.43
VCANP13611 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC-0.13□□□□□ -2.43
VCANP13611 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC-0.13□□□□□ -2.43
VCANP13611 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC-0.13□□□□□ -2.43
VCANP13611 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC-0.13□□□□□ -2.43
VCANP13611 AC025165.5-201ENST00000602802 578 ntBASIC-0.13□□□□□ -2.43
VCANP13611 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.13□□□□□ -2.43
VCANP13611 AC090132.2-201ENST00000615881 347 ntBASIC-0.13□□□□□ -2.43
VCANP13611 AC092634.6-201ENST00000418558 192 ntBASIC-0.13□□□□□ -2.43
VCANP13611 LARP1BP2-201ENST00000486594 519 ntBASIC-0.13□□□□□ -2.43
VCANP13611 TRBVA-201ENST00000498804 316 ntBASIC-0.13□□□□□ -2.43
VCANP13611 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC-0.13□□□□□ -2.43
VCANP13611 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC-0.13□□□□□ -2.43
VCANP13611 AC008147.4-201ENST00000617570 1204 ntBASIC-0.13□□□□□ -2.43
VCANP13611 LINC02211-204ENST00000642024 1070 ntBASIC-0.13□□□□□ -2.43
VCANP13611 SNORA14A-201ENST00000364773 135 ntBASIC-0.14□□□□□ -2.43
VCANP13611 AL359704.1-201ENST00000411586 781 ntBASIC-0.14□□□□□ -2.43
VCANP13611 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC-0.14□□□□□ -2.43
VCANP13611 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC-0.14□□□□□ -2.43
VCANP13611 AL590229.1-201ENST00000603497 542 ntBASIC-0.14□□□□□ -2.43
VCANP13611 AC008759.3-201ENST00000613300 508 ntBASIC-0.14□□□□□ -2.43
VCANP13611 MIR1285-2-201ENST00000408311 88 ntBASIC-0.14□□□□□ -2.43
VCANP13611 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC-0.14□□□□□ -2.43
VCANP13611 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC-0.14□□□□□ -2.43
VCANP13611 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC-0.14□□□□□ -2.43
VCANP13611 AC048346.1-201ENST00000510247 144 ntBASIC-0.14□□□□□ -2.43
VCANP13611 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC-0.14□□□□□ -2.43
VCANP13611 AL512506.2-201ENST00000624472 458 ntBASIC-0.14□□□□□ -2.43
VCANP13611 RNA5SP212-201ENST00000391223 107 ntBASIC-0.14□□□□□ -2.43
VCANP13611 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC-0.14□□□□□ -2.43
VCANP13611 AL136520.1-202ENST00000555494 763 ntBASIC-0.14□□□□□ -2.43
VCANP13611 CFTRP2-201ENST00000634304 199 ntBASIC-0.14□□□□□ -2.43
VCANP13611 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC-0.15□□□□□ -2.43
VCANP13611 AL590556.1-201ENST00000423231 483 ntBASIC-0.15□□□□□ -2.43
VCANP13611 AL353777.1-201ENST00000425552 326 ntBASIC-0.15□□□□□ -2.43
VCANP13611 PTGES3P4-201ENST00000426243 356 ntBASIC-0.15□□□□□ -2.43
VCANP13611 U8.21-201ENST00000459536 136 ntBASIC-0.15□□□□□ -2.43
VCANP13611 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC-0.15□□□□□ -2.43
VCANP13611 U1.36-201ENST00000620684 176 ntBASIC-0.15□□□□□ -2.43
VCANP13611 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC-0.15□□□□□ -2.43
VCANP13611 SNORA32.1-201ENST00000364514 115 ntBASIC-0.15□□□□□ -2.43
VCANP13611 BET1P1-201ENST00000482276 359 ntBASIC-0.15□□□□□ -2.43
VCANP13611 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC-0.15□□□□□ -2.43
VCANP13611 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC-0.15□□□□□ -2.43
VCANP13611 SNORA48.10-201ENST00000516965 160 ntBASIC-0.15□□□□□ -2.43
VCANP13611 MIR3690-201ENST00000580266 75 ntBASIC-0.15□□□□□ -2.43
VCANP13611 RNU6-1077P-201ENST00000410506 102 ntBASIC-0.15□□□□□ -2.43
VCANP13611 OR8K4P-201ENST00000534608 872 ntBASIC-0.15□□□□□ -2.43
VCANP13611 MIR4422-201ENST00000581938 83 ntBASIC-0.15□□□□□ -2.43
VCANP13611 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC-0.15□□□□□ -2.43
VCANP13611 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC-0.15□□□□□ -2.43
VCANP13611 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC-0.16□□□□□ -2.43
VCANP13611 RNU7-40P-201ENST00000516397 64 ntBASIC-0.16□□□□□ -2.43
VCANP13611 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC-0.16□□□□□ -2.43
VCANP13611 RNU6-920P-201ENST00000410926 92 ntBASIC-0.16□□□□□ -2.44
VCANP13611 RPL18AP17-201ENST00000455326 198 ntBASIC-0.16□□□□□ -2.44
VCANP13611 AP000797.1-201ENST00000478870 387 ntBASIC-0.16□□□□□ -2.44
VCANP13611 AL161423.1-201ENST00000613700 262 ntBASIC-0.16□□□□□ -2.44
VCANP13611 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC-0.16□□□□□ -2.44
VCANP13611 AP000943.4-201ENST00000622912 357 ntBASIC-0.16□□□□□ -2.44
VCANP13611 AL079343.1-201ENST00000572358 1771 ntBASIC-0.17□□□□□ -2.44
VCANP13611 RNA5SP496-201ENST00000391240 109 ntBASIC-0.17□□□□□ -2.44
VCANP13611 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC-0.17□□□□□ -2.44
VCANP13611 AC099677.1-201ENST00000420575 175 ntBASIC-0.17□□□□□ -2.44
VCANP13611 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC-0.17□□□□□ -2.44
VCANP13611 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC-0.17□□□□□ -2.44
VCANP13611 MIR4512-201ENST00000583257 77 ntBASIC-0.17□□□□□ -2.44
VCANP13611 AC008739.2-201ENST00000597006 317 ntBASIC-0.17□□□□□ -2.44
VCANP13611 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC-0.17□□□□□ -2.44
VCANP13611 AC006512.1-201ENST00000468816 291 ntBASIC-0.17□□□□□ -2.44
VCANP13611 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC-0.17□□□□□ -2.44
VCANP13611 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC-0.17□□□□□ -2.44
VCANP13611 MIR608-201ENST00000384820 100 ntBASIC-0.17□□□□□ -2.44
VCANP13611 RPS15AP5-201ENST00000436276 388 ntBASIC-0.17□□□□□ -2.44
VCANP13611 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC-0.17□□□□□ -2.44
VCANP13611 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC-0.17□□□□□ -2.44
VCANP13611 AL513534.2-201ENST00000603836 250 ntBASIC-0.17□□□□□ -2.44
VCANP13611 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC-0.18□□□□□ -2.44
VCANP13611 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC-0.18□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms