Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL6A2P12110 AC008669.1-201ENST00000565823 2178 ntBASIC3.94□□□□□ -1.78
COL6A2P12110 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
COL6A2P12110 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
COL6A2P12110 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.94□□□□□ -1.78
COL6A2P12110 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
COL6A2P12110 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.93□□□□□ -1.78
COL6A2P12110 MIR383-201ENST00000362257 73 ntBASIC3.93□□□□□ -1.78
COL6A2P12110 Y_RNA.126-201ENST00000363382 111 ntBASIC3.93□□□□□ -1.78
COL6A2P12110 Y_RNA.314-201ENST00000365114 102 ntBASIC3.93□□□□□ -1.78
COL6A2P12110 HLFP1-201ENST00000402375 499 ntBASIC3.93□□□□□ -1.78
COL6A2P12110 HSPE1P26-201ENST00000405341 275 ntBASIC3.93□□□□□ -1.78
COL6A2P12110 HSPE1P12-201ENST00000412576 301 ntBASIC3.93□□□□□ -1.78
COL6A2P12110 RPL23AP26-201ENST00000412728 464 ntBASIC3.93□□□□□ -1.78
COL6A2P12110 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL6A2P12110 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.93□□□□□ -1.78
COL6A2P12110 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.93□□□□□ -1.78
COL6A2P12110 AC098614.2-201ENST00000426040 255 ntBASIC3.93□□□□□ -1.78
COL6A2P12110 AC017083.1-201ENST00000428093 483 ntBASIC3.93□□□□□ -1.78
COL6A2P12110 AC092573.2-201ENST00000434546 243 ntBASIC3.93□□□□□ -1.78
COL6A2P12110 U8.21-201ENST00000459536 136 ntBASIC3.93□□□□□ -1.78
COL6A2P12110 RN7SL93P-201ENST00000463035 293 ntBASIC3.93□□□□□ -1.78
COL6A2P12110 AC093852.1-201ENST00000503587 266 ntBASIC3.93□□□□□ -1.78
COL6A2P12110 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
COL6A2P12110 RNU6-572P-201ENST00000516724 80 ntBASIC3.93□□□□□ -1.78
COL6A2P12110 RNU7-4P-201ENST00000516961 62 ntBASIC3.93□□□□□ -1.78
COL6A2P12110 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL6A2P12110 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.93□□□□□ -1.78
COL6A2P12110 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.93□□□□□ -1.78
COL6A2P12110 AC053481.4-201ENST00000583164 216 ntBASIC3.93□□□□□ -1.78
COL6A2P12110 AC009314.1-201ENST00000603871 304 ntBASIC3.93□□□□□ -1.78
COL6A2P12110 Z98751.3-201ENST00000604447 521 ntBASIC3.93□□□□□ -1.78
COL6A2P12110 AL021879.1-201ENST00000611756 288 ntBASIC3.93□□□□□ -1.78
COL6A2P12110 AL161629.2-201ENST00000615347 275 ntBASIC3.93□□□□□ -1.78
COL6A2P12110 AC007792.1-201ENST00000623023 402 ntBASIC3.93□□□□□ -1.78
COL6A2P12110 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL6A2P12110 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL6A2P12110 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL6A2P12110 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.93□□□□□ -1.78
COL6A2P12110 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.92□□□□□ -1.78
COL6A2P12110 Y_RNA.48-201ENST00000362710 103 ntBASIC3.92□□□□□ -1.78
COL6A2P12110 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
COL6A2P12110 SET-203ENST00000372688 801 ntTSL 2 BASIC3.92□□□□□ -1.78
COL6A2P12110 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.92□□□□□ -1.78
COL6A2P12110 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.92□□□□□ -1.78
COL6A2P12110 Y_RNA.424-201ENST00000384063 103 ntBASIC3.92□□□□□ -1.78
COL6A2P12110 RNU6-1197P-201ENST00000391183 107 ntBASIC3.92□□□□□ -1.78
COL6A2P12110 RNU6-1109P-201ENST00000391187 107 ntBASIC3.92□□□□□ -1.78
COL6A2P12110 RN7SKP27-201ENST00000410684 333 ntBASIC3.92□□□□□ -1.78
COL6A2P12110 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.92□□□□□ -1.78
COL6A2P12110 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.92□□□□□ -1.78
COL6A2P12110 DPH3P2-201ENST00000422618 250 ntBASIC3.92□□□□□ -1.78
COL6A2P12110 AC108059.2-201ENST00000434626 151 ntBASIC3.92□□□□□ -1.78
COL6A2P12110 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.92□□□□□ -1.78
COL6A2P12110 HIGD1AP2-201ENST00000446367 280 ntBASIC3.92□□□□□ -1.78
COL6A2P12110 HMGN2P13-201ENST00000476476 274 ntBASIC3.92□□□□□ -1.78
COL6A2P12110 RPL30P5-201ENST00000494923 336 ntBASIC3.92□□□□□ -1.78
COL6A2P12110 AC110794.1-201ENST00000505816 425 ntBASIC3.92□□□□□ -1.78
COL6A2P12110 AC105758.1-201ENST00000506038 399 ntBASIC3.92□□□□□ -1.78
COL6A2P12110 MRPS35P2-201ENST00000508242 191 ntBASIC3.92□□□□□ -1.78
COL6A2P12110 RNU6-703P-201ENST00000516946 107 ntBASIC3.92□□□□□ -1.78
COL6A2P12110 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
COL6A2P12110 CYCSP29-201ENST00000533731 318 ntBASIC3.92□□□□□ -1.78
COL6A2P12110 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.92□□□□□ -1.78
COL6A2P12110 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL6A2P12110 HSPE1P5-201ENST00000561489 272 ntBASIC3.92□□□□□ -1.78
COL6A2P12110 MIR5701-3-201ENST00000578890 82 ntBASIC3.92□□□□□ -1.78
COL6A2P12110 MIR5701-1-201ENST00000585138 82 ntBASIC3.92□□□□□ -1.78
COL6A2P12110 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.92□□□□□ -1.78
COL6A2P12110 AC005046.1-201ENST00000608515 625 ntBASIC3.92□□□□□ -1.78
COL6A2P12110 MIR5701-2-201ENST00000615634 82 ntBASIC3.92□□□□□ -1.78
COL6A2P12110 AC027309.3-201ENST00000623419 351 ntBASIC3.92□□□□□ -1.78
COL6A2P12110 AC244205.2-202ENST00000635781 342 ntBASIC3.92□□□□□ -1.78
COL6A2P12110 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL6A2P12110 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
COL6A2P12110 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.91□□□□□ -1.78
COL6A2P12110 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL6A2P12110 RNU4-42P-201ENST00000364738 142 ntBASIC3.91□□□□□ -1.78
COL6A2P12110 RNU6-702P-201ENST00000364982 107 ntBASIC3.91□□□□□ -1.78
COL6A2P12110 Y_RNA.556-201ENST00000384677 113 ntBASIC3.91□□□□□ -1.78
COL6A2P12110 PTMAP5-201ENST00000393073 333 ntBASIC3.91□□□□□ -1.78
COL6A2P12110 Y_RNA.618-201ENST00000410949 107 ntBASIC3.91□□□□□ -1.78
COL6A2P12110 CRYBB2P1-203ENST00000415709 538 ntBASIC3.91□□□□□ -1.78
COL6A2P12110 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.91□□□□□ -1.78
COL6A2P12110 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.91□□□□□ -1.78
COL6A2P12110 AC007560.1-201ENST00000426912 237 ntBASIC3.91□□□□□ -1.78
COL6A2P12110 AL353997.1-201ENST00000432936 108 ntBASIC3.91□□□□□ -1.78
COL6A2P12110 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.91□□□□□ -1.78
COL6A2P12110 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.91□□□□□ -1.78
COL6A2P12110 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL6A2P12110 UQCRHP4-201ENST00000471686 272 ntBASIC3.91□□□□□ -1.78
COL6A2P12110 FO393415.2-201ENST00000480085 343 ntBASIC3.91□□□□□ -1.78
COL6A2P12110 Y_RNA.687-201ENST00000516558 91 ntBASIC3.91□□□□□ -1.78
COL6A2P12110 RNU6-635P-201ENST00000516651 102 ntBASIC3.91□□□□□ -1.78
COL6A2P12110 AP005902.1-201ENST00000521358 186 ntBASIC3.91□□□□□ -1.78
COL6A2P12110 HSBP1P1-201ENST00000555205 166 ntBASIC3.91□□□□□ -1.78
COL6A2P12110 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.91□□□□□ -1.78
COL6A2P12110 MIR1254-2-201ENST00000579553 63 ntBASIC3.91□□□□□ -1.78
COL6A2P12110 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.91□□□□□ -1.78
COL6A2P12110 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms