Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 uc_338.25-201ENST00000613756 156 ntBASIC2.76□□□□□ -1.97
RAF1P04049 MIR3662-201ENST00000637030 95 ntBASIC2.76□□□□□ -1.97
RAF1P04049 AC024614.3-201ENST00000637860 256 ntBASIC2.76□□□□□ -1.97
RAF1P04049 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.76□□□□□ -1.97
RAF1P04049 AC009487.2-201ENST00000420969 6821 ntBASIC2.76□□□□□ -1.97
RAF1P04049 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
RAF1P04049 AC000403.1-201ENST00000613696 3585 ntBASIC2.76□□□□□ -1.97
RAF1P04049 AL354685.2-201ENST00000448218 1447 ntBASIC2.76□□□□□ -1.97
RAF1P04049 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.76□□□□□ -1.97
RAF1P04049 GABRG2-229ENST00000641017 3628 ntBASIC2.75□□□□□ -1.97
RAF1P04049 AC103710.2-202ENST00000641454 2853 ntBASIC2.75□□□□□ -1.97
RAF1P04049 AC010680.1-201ENST00000590024 3590 ntBASIC2.75□□□□□ -1.97
RAF1P04049 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
RAF1P04049 RNU6-552P-201ENST00000362869 119 ntBASIC2.75□□□□□ -1.97
RAF1P04049 Y_RNA.88-201ENST00000363029 99 ntBASIC2.75□□□□□ -1.97
RAF1P04049 RNU6-817P-201ENST00000391083 104 ntBASIC2.75□□□□□ -1.97
RAF1P04049 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
RAF1P04049 RNU2-29P-201ENST00000410423 189 ntBASIC2.75□□□□□ -1.97
RAF1P04049 OR9R1P-201ENST00000412200 877 ntBASIC2.75□□□□□ -1.97
RAF1P04049 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.75□□□□□ -1.97
RAF1P04049 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.75□□□□□ -1.97
RAF1P04049 RPL30P16-201ENST00000419341 429 ntBASIC2.75□□□□□ -1.97
RAF1P04049 SNRPEP10-201ENST00000420249 274 ntBASIC2.75□□□□□ -1.97
RAF1P04049 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.75□□□□□ -1.97
RAF1P04049 AL714022.1-201ENST00000439897 151 ntBASIC2.75□□□□□ -1.97
RAF1P04049 MTATP6P23-201ENST00000440153 476 ntBASIC2.75□□□□□ -1.97
RAF1P04049 MTND4P18-201ENST00000447010 465 ntBASIC2.75□□□□□ -1.97
RAF1P04049 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.75□□□□□ -1.97
RAF1P04049 PRDX4P1-201ENST00000507189 574 ntBASIC2.75□□□□□ -1.97
RAF1P04049 AC117522.3-201ENST00000507974 584 ntBASIC2.75□□□□□ -1.97
RAF1P04049 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.75□□□□□ -1.97
RAF1P04049 RNU6-677P-201ENST00000516914 101 ntBASIC2.75□□□□□ -1.97
RAF1P04049 RNU6-56P-201ENST00000516986 93 ntBASIC2.75□□□□□ -1.97
RAF1P04049 RNU6-685P-201ENST00000517088 95 ntBASIC2.75□□□□□ -1.97
RAF1P04049 SUB1P1-201ENST00000524415 382 ntBASIC2.75□□□□□ -1.97
RAF1P04049 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.75□□□□□ -1.97
RAF1P04049 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.75□□□□□ -1.97
RAF1P04049 HIF1AP1-201ENST00000553642 175 ntBASIC2.75□□□□□ -1.97
RAF1P04049 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.75□□□□□ -1.97
RAF1P04049 AL138976.2-201ENST00000563989 694 ntBASIC2.75□□□□□ -1.97
RAF1P04049 AL035413.2-201ENST00000604801 525 ntBASIC2.75□□□□□ -1.97
RAF1P04049 MTND4LP5-201ENST00000605152 292 ntBASIC2.75□□□□□ -1.97
RAF1P04049 AC008945.2-201ENST00000606056 604 ntBASIC2.75□□□□□ -1.97
RAF1P04049 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.75□□□□□ -1.97
RAF1P04049 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.75□□□□□ -1.97
RAF1P04049 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.75□□□□□ -1.97
RAF1P04049 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
RAF1P04049 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.75□□□□□ -1.97
RAF1P04049 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
RAF1P04049 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
RAF1P04049 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
RAF1P04049 RNU6-884P-201ENST00000363889 107 ntBASIC2.74□□□□□ -1.97
RAF1P04049 RNU6-190P-201ENST00000384154 102 ntBASIC2.74□□□□□ -1.97
RAF1P04049 RNY3P14-201ENST00000384309 102 ntBASIC2.74□□□□□ -1.97
RAF1P04049 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.74□□□□□ -1.97
RAF1P04049 SNORD88.1-201ENST00000408684 91 ntBASIC2.74□□□□□ -1.97
RAF1P04049 RNU6-387P-201ENST00000411331 105 ntBASIC2.74□□□□□ -1.97
RAF1P04049 RPS12P24-201ENST00000412619 387 ntBASIC2.74□□□□□ -1.97
RAF1P04049 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.74□□□□□ -1.97
RAF1P04049 ATG3P1-201ENST00000419507 911 ntBASIC2.74□□□□□ -1.97
RAF1P04049 AC022018.1-201ENST00000430685 241 ntBASIC2.74□□□□□ -1.97
RAF1P04049 GPM6BP2-201ENST00000432046 144 ntBASIC2.74□□□□□ -1.97
RAF1P04049 SNRPEP9-201ENST00000436794 238 ntBASIC2.74□□□□□ -1.97
RAF1P04049 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.74□□□□□ -1.97
RAF1P04049 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.74□□□□□ -1.97
RAF1P04049 GPM6BP1-201ENST00000446387 144 ntBASIC2.74□□□□□ -1.97
RAF1P04049 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.74□□□□□ -1.97
RAF1P04049 RNU6-953P-201ENST00000459154 107 ntBASIC2.74□□□□□ -1.97
RAF1P04049 EIF4EP3-201ENST00000498782 656 ntBASIC2.74□□□□□ -1.97
RAF1P04049 AC010486.1-201ENST00000511793 424 ntBASIC2.74□□□□□ -1.97
RAF1P04049 RAC1P5-201ENST00000512182 576 ntBASIC2.74□□□□□ -1.97
RAF1P04049 AC008885.1-201ENST00000514930 301 ntBASIC2.74□□□□□ -1.97
RAF1P04049 RNU6-358P-201ENST00000516564 75 ntBASIC2.74□□□□□ -1.97
RAF1P04049 RNA5SP165-201ENST00000517142 115 ntBASIC2.74□□□□□ -1.97
RAF1P04049 ADI1P3-201ENST00000549509 470 ntBASIC2.74□□□□□ -1.97
RAF1P04049 AL391261.3-201ENST00000557194 520 ntBASIC2.74□□□□□ -1.97
RAF1P04049 MIR2682-201ENST00000580305 110 ntBASIC2.74□□□□□ -1.97
RAF1P04049 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.74□□□□□ -1.97
RAF1P04049 AC023043.3-201ENST00000593113 385 ntBASIC2.74□□□□□ -1.97
RAF1P04049 AL158032.1-201ENST00000605401 106 ntBASIC2.74□□□□□ -1.97
RAF1P04049 AC022893.3-201ENST00000607665 437 ntBASIC2.74□□□□□ -1.97
RAF1P04049 AC107294.1-201ENST00000609524 467 ntBASIC2.74□□□□□ -1.97
RAF1P04049 AL359198.2-201ENST00000611836 194 ntBASIC2.74□□□□□ -1.97
RAF1P04049 DISC2.1-201ENST00000612827 205 ntBASIC2.74□□□□□ -1.97
RAF1P04049 AC004852.3-201ENST00000614131 326 ntBASIC2.74□□□□□ -1.97
RAF1P04049 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.74□□□□□ -1.97
RAF1P04049 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
RAF1P04049 ASNSP3-201ENST00000451989 1306 ntBASIC2.73□□□□□ -1.97
RAF1P04049 AC091564.4-201ENST00000533934 2194 ntBASIC2.73□□□□□ -1.97
RAF1P04049 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
RAF1P04049 RNU6-1287P-201ENST00000362914 107 ntBASIC2.73□□□□□ -1.97
RAF1P04049 RNA5SP139-201ENST00000364340 117 ntBASIC2.73□□□□□ -1.97
RAF1P04049 SNORA71.1-201ENST00000364523 117 ntBASIC2.73□□□□□ -1.97
RAF1P04049 Y_RNA.303-201ENST00000364998 94 ntBASIC2.73□□□□□ -1.97
RAF1P04049 RNA5SP126-201ENST00000365092 109 ntBASIC2.73□□□□□ -1.97
RAF1P04049 SNORA7.4-201ENST00000384249 137 ntBASIC2.73□□□□□ -1.97
RAF1P04049 RNU6-1060P-201ENST00000384664 107 ntBASIC2.73□□□□□ -1.97
RAF1P04049 RNU6-550P-201ENST00000391057 101 ntBASIC2.73□□□□□ -1.97
RAF1P04049 FGF7P8-201ENST00000402994 292 ntBASIC2.73□□□□□ -1.97
RAF1P04049 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms