Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC010205.1-201ENST00000616668 449 ntBASIC2.79□□□□□ -1.96
COL2A1P02458 AC090971.5-201ENST00000621102 293 ntBASIC2.79□□□□□ -1.96
COL2A1P02458 AC138649.5-201ENST00000637456 137 ntBASIC2.79□□□□□ -1.96
COL2A1P02458 AC002543.1-201ENST00000299783 1954 ntBASIC2.79□□□□□ -1.96
COL2A1P02458 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
COL2A1P02458 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
COL2A1P02458 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.78□□□□□ -1.96
COL2A1P02458 Y_RNA.31-201ENST00000362574 102 ntBASIC2.78□□□□□ -1.96
COL2A1P02458 RNU6-1120P-201ENST00000362988 108 ntBASIC2.78□□□□□ -1.96
COL2A1P02458 RNU4-14P-201ENST00000410858 122 ntBASIC2.78□□□□□ -1.96
COL2A1P02458 MTND3P8-201ENST00000412909 339 ntBASIC2.78□□□□□ -1.96
COL2A1P02458 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC2.78□□□□□ -1.96
COL2A1P02458 MTND3P16-201ENST00000452205 344 ntBASIC2.78□□□□□ -1.96
COL2A1P02458 GSTA11P-201ENST00000452866 669 ntBASIC2.78□□□□□ -1.96
COL2A1P02458 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.78□□□□□ -1.96
COL2A1P02458 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC2.78□□□□□ -1.96
COL2A1P02458 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.78□□□□□ -1.96
COL2A1P02458 SNORA70.14-201ENST00000516205 110 ntBASIC2.78□□□□□ -1.96
COL2A1P02458 SCARNA24.1-201ENST00000516465 137 ntBASIC2.78□□□□□ -1.96
COL2A1P02458 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.78□□□□□ -1.96
COL2A1P02458 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.78□□□□□ -1.96
COL2A1P02458 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.78□□□□□ -1.96
COL2A1P02458 AC018630.1-201ENST00000541376 925 ntBASIC2.78□□□□□ -1.96
COL2A1P02458 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.78□□□□□ -1.96
COL2A1P02458 OR4H12P-201ENST00000556269 907 ntBASIC2.78□□□□□ -1.96
COL2A1P02458 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.78□□□□□ -1.96
COL2A1P02458 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.78□□□□□ -1.96
COL2A1P02458 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.78□□□□□ -1.96
COL2A1P02458 AC113139.1-201ENST00000605049 239 ntBASIC2.78□□□□□ -1.96
COL2A1P02458 AC124303.1-201ENST00000605703 360 ntBASIC2.78□□□□□ -1.96
COL2A1P02458 AC002076.2-201ENST00000617362 122 ntBASIC2.78□□□□□ -1.96
COL2A1P02458 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.78□□□□□ -1.96
COL2A1P02458 AL356585.4-201ENST00000623078 1229 ntBASIC2.78□□□□□ -1.96
COL2A1P02458 AC025125.1-201ENST00000624743 1922 ntBASIC2.78□□□□□ -1.96
COL2A1P02458 AL592437.2-201ENST00000421655 2434 ntBASIC2.78□□□□□ -1.96
COL2A1P02458 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.78□□□□□ -1.96
COL2A1P02458 OR4G1P-203ENST00000641984 1631 ntBASIC2.78□□□□□ -1.96
COL2A1P02458 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.78□□□□□ -1.96
COL2A1P02458 AC114546.3-201ENST00000623582 1734 ntBASIC2.78□□□□□ -1.96
COL2A1P02458 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
COL2A1P02458 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
COL2A1P02458 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.78□□□□□ -1.96
COL2A1P02458 MTND5P6-201ENST00000422338 1798 ntBASIC2.78□□□□□ -1.97
COL2A1P02458 Y_RNA.157-201ENST00000363638 102 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 RNY1P12-201ENST00000364251 105 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
COL2A1P02458 RNU6-444P-201ENST00000383988 108 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 RNU6-43P-201ENST00000384302 107 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 RNU6-831P-201ENST00000384548 107 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
COL2A1P02458 PRRC2CP1-201ENST00000404428 159 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 RNU2-8P-201ENST00000410727 190 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 AC007064.1-201ENST00000412238 351 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC2.77□□□□□ -1.97
COL2A1P02458 AC113618.1-201ENST00000416747 285 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 AC018630.2-202ENST00000422992 927 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 SAR1AP4-201ENST00000429225 591 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.77□□□□□ -1.97
COL2A1P02458 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.77□□□□□ -1.97
COL2A1P02458 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.77□□□□□ -1.97
COL2A1P02458 AC093677.1-201ENST00000514414 678 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 AC105417.1-201ENST00000514691 285 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 RNA5SP281-201ENST00000516504 135 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 RNU6-201P-201ENST00000517100 61 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC2.77□□□□□ -1.97
COL2A1P02458 AC090572.1-201ENST00000519251 160 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 OR4R1P-201ENST00000529879 463 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.77□□□□□ -1.97
COL2A1P02458 ELOCP31-201ENST00000540463 467 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.77□□□□□ -1.97
COL2A1P02458 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.77□□□□□ -1.97
COL2A1P02458 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.77□□□□□ -1.97
COL2A1P02458 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.77□□□□□ -1.97
COL2A1P02458 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.77□□□□□ -1.97
COL2A1P02458 AC006254.3-201ENST00000603353 884 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC2.77□□□□□ -1.97
COL2A1P02458 AC090425.1-201ENST00000610007 140 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.77□□□□□ -1.97
COL2A1P02458 AC079597.1-201ENST00000624306 508 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
COL2A1P02458 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
COL2A1P02458 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
COL2A1P02458 AC022336.2-201ENST00000568966 2538 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 AC244517.1-201ENST00000606030 2086 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
COL2A1P02458 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
COL2A1P02458 RNU6-1159P-201ENST00000362933 107 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 RNU6-1252P-201ENST00000363054 104 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 RNU5E-8P-201ENST00000363502 116 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 Y_RNA.431-201ENST00000384086 102 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 RNU6-441P-201ENST00000384545 106 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 RNU6-510P-201ENST00000391239 108 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
COL2A1P02458 AL356421.1-201ENST00000403255 413 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 AL024474.1-201ENST00000404655 591 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 MIR548P-201ENST00000408336 84 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 RNU6-373P-201ENST00000411247 98 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.77□□□□□ -1.97
COL2A1P02458 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.77□□□□□ -1.97
COL2A1P02458 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms