Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 MIR184-201ENST00000384962 84 ntBASIC3.54□□□□□ -1.84
VPS4BO75351 MIR493-201ENST00000385254 89 ntBASIC3.54□□□□□ -1.84
VPS4BO75351 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VPS4BO75351 RNA5SP129-201ENST00000410276 118 ntBASIC3.54□□□□□ -1.84
VPS4BO75351 AL592148.1-201ENST00000413568 445 ntBASIC3.54□□□□□ -1.84
VPS4BO75351 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.54□□□□□ -1.84
VPS4BO75351 MTCO2P12-201ENST00000427426 682 ntBASIC3.54□□□□□ -1.84
VPS4BO75351 AC007919.1-201ENST00000429380 217 ntBASIC3.54□□□□□ -1.84
VPS4BO75351 AL645568.3-201ENST00000433683 316 ntBASIC3.54□□□□□ -1.84
VPS4BO75351 HMGB1P12-201ENST00000438594 598 ntBASIC3.54□□□□□ -1.84
VPS4BO75351 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.54□□□□□ -1.84
VPS4BO75351 CECR9-201ENST00000453421 199 ntBASIC3.54□□□□□ -1.84
VPS4BO75351 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.54□□□□□ -1.84
VPS4BO75351 AL135752.1-201ENST00000479477 471 ntBASIC3.54□□□□□ -1.84
VPS4BO75351 RPS4XP13-201ENST00000483219 789 ntBASIC3.54□□□□□ -1.84
VPS4BO75351 AC005741.1-201ENST00000511094 432 ntBASIC3.54□□□□□ -1.84
VPS4BO75351 RNU2-27P-201ENST00000516185 142 ntBASIC3.54□□□□□ -1.84
VPS4BO75351 SCARNA15.1-201ENST00000516384 125 ntBASIC3.54□□□□□ -1.84
VPS4BO75351 MIR892C-201ENST00000516410 77 ntBASIC3.54□□□□□ -1.84
VPS4BO75351 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VPS4BO75351 AC124303.1-201ENST00000605703 360 ntBASIC3.54□□□□□ -1.84
VPS4BO75351 RMST_8.1-201ENST00000610287 165 ntBASIC3.54□□□□□ -1.84
VPS4BO75351 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.54□□□□□ -1.84
VPS4BO75351 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
VPS4BO75351 AL049641.1-201ENST00000441055 1948 ntBASIC3.54□□□□□ -1.84
VPS4BO75351 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.54□□□□□ -1.84
VPS4BO75351 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VPS4BO75351 AC007656.2-201ENST00000624902 4547 ntBASIC3.53□□□□□ -1.84
VPS4BO75351 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.53□□□□□ -1.84
VPS4BO75351 AC091152.2-201ENST00000591628 2569 ntBASIC3.53□□□□□ -1.84
VPS4BO75351 RNU6-1188P-201ENST00000363795 107 ntBASIC3.53□□□□□ -1.84
VPS4BO75351 Y_RNA.324-201ENST00000365165 102 ntBASIC3.53□□□□□ -1.84
VPS4BO75351 Y_RNA.326-201ENST00000365176 113 ntBASIC3.53□□□□□ -1.84
VPS4BO75351 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.53□□□□□ -1.84
VPS4BO75351 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
VPS4BO75351 Y_RNA.579-201ENST00000390939 94 ntBASIC3.53□□□□□ -1.84
VPS4BO75351 SNORA40C-201ENST00000391285 128 ntBASIC3.53□□□□□ -1.84
VPS4BO75351 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
VPS4BO75351 AC096664.2-201ENST00000411843 406 ntBASIC3.53□□□□□ -1.84
VPS4BO75351 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.53□□□□□ -1.84
VPS4BO75351 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.53□□□□□ -1.84
VPS4BO75351 UBE2V1P4-201ENST00000425374 344 ntBASIC3.53□□□□□ -1.84
VPS4BO75351 AL159987.2-201ENST00000432754 307 ntBASIC3.53□□□□□ -1.84
VPS4BO75351 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.53□□□□□ -1.84
VPS4BO75351 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.53□□□□□ -1.84
VPS4BO75351 AL133162.1-201ENST00000463228 453 ntBASIC3.53□□□□□ -1.84
VPS4BO75351 AC130509.1-201ENST00000464158 433 ntBASIC3.53□□□□□ -1.84
VPS4BO75351 AC104472.2-201ENST00000469035 601 ntBASIC3.53□□□□□ -1.84
VPS4BO75351 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.53□□□□□ -1.84
VPS4BO75351 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VPS4BO75351 AC092436.3-201ENST00000511788 257 ntBASIC3.53□□□□□ -1.84
VPS4BO75351 RNU6-1231P-201ENST00000517185 103 ntBASIC3.53□□□□□ -1.84
VPS4BO75351 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VPS4BO75351 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.53□□□□□ -1.84
VPS4BO75351 AC026371.1-201ENST00000551867 419 ntBASIC3.53□□□□□ -1.84
VPS4BO75351 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.53□□□□□ -1.84
VPS4BO75351 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.53□□□□□ -1.84
VPS4BO75351 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VPS4BO75351 AC022432.1-201ENST00000595739 310 ntBASIC3.53□□□□□ -1.84
VPS4BO75351 AL627309.6-201ENST00000606857 840 ntBASIC3.53□□□□□ -1.84
VPS4BO75351 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.85
VPS4BO75351 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.53□□□□□ -1.85
VPS4BO75351 AC022336.2-201ENST00000568966 2538 ntBASIC3.52□□□□□ -1.85
VPS4BO75351 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
VPS4BO75351 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
VPS4BO75351 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
VPS4BO75351 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.52□□□□□ -1.85
VPS4BO75351 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
VPS4BO75351 AC138393.1-203ENST00000327086 343 ntBASIC3.52□□□□□ -1.85
VPS4BO75351 SNORD3E-201ENST00000362899 217 ntBASIC3.52□□□□□ -1.85
VPS4BO75351 RNA5SP50-201ENST00000363731 107 ntBASIC3.52□□□□□ -1.85
VPS4BO75351 RNU6-214P-201ENST00000384130 107 ntBASIC3.52□□□□□ -1.85
VPS4BO75351 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
VPS4BO75351 U3.39-201ENST00000408569 239 ntBASIC3.52□□□□□ -1.85
VPS4BO75351 RNU6-370P-201ENST00000411008 104 ntBASIC3.52□□□□□ -1.85
VPS4BO75351 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.52□□□□□ -1.85
VPS4BO75351 AL590632.1-201ENST00000424289 371 ntBASIC3.52□□□□□ -1.85
VPS4BO75351 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.52□□□□□ -1.85
VPS4BO75351 SNRPEP9-201ENST00000436794 238 ntBASIC3.52□□□□□ -1.85
VPS4BO75351 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.52□□□□□ -1.85
VPS4BO75351 BRK1P2-201ENST00000442875 223 ntBASIC3.52□□□□□ -1.85
VPS4BO75351 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.52□□□□□ -1.85
VPS4BO75351 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.52□□□□□ -1.85
VPS4BO75351 AC006539.3-201ENST00000454258 129 ntBASIC3.52□□□□□ -1.85
VPS4BO75351 ELOCP24-201ENST00000456370 334 ntBASIC3.52□□□□□ -1.85
VPS4BO75351 HMGN2P16-201ENST00000456802 261 ntBASIC3.52□□□□□ -1.85
VPS4BO75351 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.52□□□□□ -1.85
VPS4BO75351 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.52□□□□□ -1.85
VPS4BO75351 CASP1P1-201ENST00000526345 212 ntBASIC3.52□□□□□ -1.85
VPS4BO75351 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
VPS4BO75351 AC008011.1-201ENST00000545989 227 ntBASIC3.52□□□□□ -1.85
VPS4BO75351 AC020661.2-201ENST00000560114 134 ntBASIC3.52□□□□□ -1.85
VPS4BO75351 MIR3186-201ENST00000577404 85 ntBASIC3.52□□□□□ -1.85
VPS4BO75351 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.52□□□□□ -1.85
VPS4BO75351 MIR4513-201ENST00000581077 86 ntBASIC3.52□□□□□ -1.85
VPS4BO75351 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.52□□□□□ -1.85
VPS4BO75351 AC134503.1-201ENST00000633048 54 ntBASIC3.52□□□□□ -1.85
VPS4BO75351 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
VPS4BO75351 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.52□□□□□ -1.85
VPS4BO75351 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms