Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
GFRA3O60609 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
GFRA3O60609 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
GFRA3O60609 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
GFRA3O60609 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.93□□□□□ -1.62
GFRA3O60609 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
GFRA3O60609 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.93□□□□□ -1.62
GFRA3O60609 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
GFRA3O60609 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
GFRA3O60609 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
GFRA3O60609 SNORD115-30-201ENST00000364117 82 ntBASIC4.93□□□□□ -1.62
GFRA3O60609 SNORD32A-201ENST00000364805 84 ntBASIC4.93□□□□□ -1.62
GFRA3O60609 Y_RNA.341-201ENST00000365341 102 ntBASIC4.93□□□□□ -1.62
GFRA3O60609 Y_RNA.456-201ENST00000384232 111 ntBASIC4.93□□□□□ -1.62
GFRA3O60609 MIR34A-201ENST00000385130 110 ntBASIC4.93□□□□□ -1.62
GFRA3O60609 PTMAP2-201ENST00000397627 327 ntBASIC4.93□□□□□ -1.62
GFRA3O60609 RNU6-628P-201ENST00000410675 107 ntBASIC4.93□□□□□ -1.62
GFRA3O60609 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.93□□□□□ -1.62
GFRA3O60609 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.93□□□□□ -1.62
GFRA3O60609 AC243964.1-201ENST00000441814 261 ntBASIC4.93□□□□□ -1.62
GFRA3O60609 AC009237.8-201ENST00000445492 379 ntBASIC4.93□□□□□ -1.62
GFRA3O60609 AC091179.3-201ENST00000474761 144 ntBASIC4.93□□□□□ -1.62
GFRA3O60609 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
GFRA3O60609 AC026726.1-201ENST00000512859 601 ntBASIC4.93□□□□□ -1.62
GFRA3O60609 HIGD1AP3-201ENST00000515857 278 ntBASIC4.93□□□□□ -1.62
GFRA3O60609 RNA5SP54-201ENST00000516951 92 ntBASIC4.93□□□□□ -1.62
GFRA3O60609 MIR5571-201ENST00000577998 113 ntBASIC4.93□□□□□ -1.62
GFRA3O60609 AC099778.2-201ENST00000610904 211 ntBASIC4.93□□□□□ -1.62
GFRA3O60609 MVP-219ENST00000629059 120 ntTSL 5 BASIC4.93□□□□□ -1.62
GFRA3O60609 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
GFRA3O60609 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.93□□□□□ -1.62
GFRA3O60609 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
GFRA3O60609 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.93□□□□□ -1.62
GFRA3O60609 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.93□□□□□ -1.62
GFRA3O60609 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
GFRA3O60609 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
GFRA3O60609 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
GFRA3O60609 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
GFRA3O60609 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
GFRA3O60609 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.92□□□□□ -1.62
GFRA3O60609 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
GFRA3O60609 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
GFRA3O60609 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
GFRA3O60609 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
GFRA3O60609 SNORA71.3-201ENST00000362582 128 ntBASIC4.92□□□□□ -1.62
GFRA3O60609 U3.10-201ENST00000364459 214 ntBASIC4.92□□□□□ -1.62
GFRA3O60609 SNORA40C-201ENST00000391285 128 ntBASIC4.92□□□□□ -1.62
GFRA3O60609 MIR889-201ENST00000401280 79 ntBASIC4.92□□□□□ -1.62
GFRA3O60609 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC4.92□□□□□ -1.62
GFRA3O60609 AL162591.2-201ENST00000449634 317 ntBASIC4.92□□□□□ -1.62
GFRA3O60609 IGHV5-78-201ENST00000450948 295 ntBASIC4.92□□□□□ -1.62
GFRA3O60609 snoU109.2-201ENST00000459316 135 ntBASIC4.92□□□□□ -1.62
GFRA3O60609 COX6CP6-201ENST00000490840 228 ntBASIC4.92□□□□□ -1.62
GFRA3O60609 AC139453.3-201ENST00000493276 369 ntBASIC4.92□□□□□ -1.62
GFRA3O60609 IGKV2D-36-201ENST00000518643 226 ntBASIC4.92□□□□□ -1.62
GFRA3O60609 AC068339.1-201ENST00000526965 141 ntBASIC4.92□□□□□ -1.62
GFRA3O60609 AC141557.1-201ENST00000540982 400 ntBASIC4.92□□□□□ -1.62
GFRA3O60609 AC022254.1-201ENST00000567857 235 ntBASIC4.92□□□□□ -1.62
GFRA3O60609 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC4.92□□□□□ -1.62
GFRA3O60609 AC007229.1-201ENST00000590455 412 ntBASIC4.92□□□□□ -1.62
GFRA3O60609 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.92□□□□□ -1.62
GFRA3O60609 Xist_exon4.1-201ENST00000615964 126 ntBASIC4.92□□□□□ -1.62
GFRA3O60609 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
GFRA3O60609 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
GFRA3O60609 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.92□□□□□ -1.62
GFRA3O60609 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.92□□□□□ -1.62
GFRA3O60609 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.92□□□□□ -1.62
GFRA3O60609 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
GFRA3O60609 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
GFRA3O60609 Z95114.1-201ENST00000624264 14574 ntBASIC4.91□□□□□ -1.62
GFRA3O60609 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
GFRA3O60609 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
GFRA3O60609 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
GFRA3O60609 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
GFRA3O60609 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
GFRA3O60609 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
GFRA3O60609 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
GFRA3O60609 RNU6-1167P-201ENST00000363227 94 ntBASIC4.91□□□□□ -1.62
GFRA3O60609 RNU5F-3P-201ENST00000363767 117 ntBASIC4.91□□□□□ -1.62
GFRA3O60609 SNORA4.2-201ENST00000365313 147 ntBASIC4.91□□□□□ -1.62
GFRA3O60609 RNU6-793P-201ENST00000384233 104 ntBASIC4.91□□□□□ -1.62
GFRA3O60609 RNU6-166P-201ENST00000384371 107 ntBASIC4.91□□□□□ -1.62
GFRA3O60609 U3.30-201ENST00000391308 210 ntBASIC4.91□□□□□ -1.62
GFRA3O60609 RNU6-855P-201ENST00000410395 104 ntBASIC4.91□□□□□ -1.62
GFRA3O60609 RPL23AP95-201ENST00000426806 265 ntBASIC4.91□□□□□ -1.62
GFRA3O60609 FTH1P6-201ENST00000430768 320 ntBASIC4.91□□□□□ -1.62
GFRA3O60609 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
GFRA3O60609 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.91□□□□□ -1.62
GFRA3O60609 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.91□□□□□ -1.62
GFRA3O60609 AC073465.2-201ENST00000440938 498 ntBASIC4.91□□□□□ -1.62
GFRA3O60609 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.91□□□□□ -1.62
GFRA3O60609 RN7SL303P-201ENST00000469773 251 ntBASIC4.91□□□□□ -1.62
GFRA3O60609 AC015795.1-201ENST00000513669 327 ntBASIC4.91□□□□□ -1.62
GFRA3O60609 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.91□□□□□ -1.62
GFRA3O60609 AC131238.1-201ENST00000617135 328 ntBASIC4.91□□□□□ -1.62
GFRA3O60609 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
GFRA3O60609 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
GFRA3O60609 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC4.91□□□□□ -1.62
GFRA3O60609 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
GFRA3O60609 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms