Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
FOXD2O60548 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.12□□□□□ -1.75
FOXD2O60548 COX6CP3-201ENST00000580869 223 ntBASIC4.12□□□□□ -1.75
FOXD2O60548 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.12□□□□□ -1.75
FOXD2O60548 RNA5SP108-201ENST00000605921 117 ntBASIC4.12□□□□□ -1.75
FOXD2O60548 AC006023.2-201ENST00000609916 167 ntBASIC4.12□□□□□ -1.75
FOXD2O60548 AC104465.1-201ENST00000611365 139 ntBASIC4.12□□□□□ -1.75
FOXD2O60548 MIR4727-201ENST00000622232 55 ntBASIC4.12□□□□□ -1.75
FOXD2O60548 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
FOXD2O60548 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
FOXD2O60548 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
FOXD2O60548 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
FOXD2O60548 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.11□□□□□ -1.75
FOXD2O60548 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
FOXD2O60548 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.11□□□□□ -1.75
FOXD2O60548 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.11□□□□□ -1.75
FOXD2O60548 RNU6-1298P-201ENST00000362456 101 ntBASIC4.11□□□□□ -1.75
FOXD2O60548 RNA5SP258-201ENST00000362750 119 ntBASIC4.11□□□□□ -1.75
FOXD2O60548 RNU6-153P-201ENST00000364422 104 ntBASIC4.11□□□□□ -1.75
FOXD2O60548 Y_RNA.383-201ENST00000383855 97 ntBASIC4.11□□□□□ -1.75
FOXD2O60548 RNU6-213P-201ENST00000384051 104 ntBASIC4.11□□□□□ -1.75
FOXD2O60548 RNU6-441P-201ENST00000384545 106 ntBASIC4.11□□□□□ -1.75
FOXD2O60548 MIR649-201ENST00000384843 97 ntBASIC4.11□□□□□ -1.75
FOXD2O60548 Z92545.1-201ENST00000411782 234 ntBASIC4.11□□□□□ -1.75
FOXD2O60548 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.11□□□□□ -1.75
FOXD2O60548 AL691449.1-201ENST00000426570 421 ntBASIC4.11□□□□□ -1.75
FOXD2O60548 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.11□□□□□ -1.75
FOXD2O60548 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.11□□□□□ -1.75
FOXD2O60548 AC084198.1-201ENST00000477747 402 ntBASIC4.11□□□□□ -1.75
FOXD2O60548 RPL7P23-201ENST00000493874 747 ntBASIC4.11□□□□□ -1.75
FOXD2O60548 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.11□□□□□ -1.75
FOXD2O60548 AC025423.5-201ENST00000550230 219 ntBASIC4.11□□□□□ -1.75
FOXD2O60548 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
FOXD2O60548 AC012443.1-201ENST00000605605 231 ntBASIC4.11□□□□□ -1.75
FOXD2O60548 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.11□□□□□ -1.75
FOXD2O60548 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.11□□□□□ -1.75
FOXD2O60548 MIR1244-1-201ENST00000612829 85 ntBASIC4.11□□□□□ -1.75
FOXD2O60548 MIR6864-201ENST00000617935 70 ntBASIC4.11□□□□□ -1.75
FOXD2O60548 AC091905.2-201ENST00000623143 306 ntBASIC4.11□□□□□ -1.75
FOXD2O60548 MIR1244-3-201ENST00000635744 85 ntBASIC4.11□□□□□ -1.75
FOXD2O60548 AL034408.1-202ENST00000636088 415 ntBASIC4.11□□□□□ -1.75
FOXD2O60548 MIR1244-2-201ENST00000636449 85 ntBASIC4.11□□□□□ -1.75
FOXD2O60548 MIR1244-4-202ENST00000636813 85 ntBASIC4.11□□□□□ -1.75
FOXD2O60548 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
FOXD2O60548 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
FOXD2O60548 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.11□□□□□ -1.75
FOXD2O60548 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.11□□□□□ -1.75
FOXD2O60548 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
FOXD2O60548 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
FOXD2O60548 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
FOXD2O60548 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.1□□□□□ -1.75
FOXD2O60548 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
FOXD2O60548 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.1□□□□□ -1.75
FOXD2O60548 RNA5SP307-201ENST00000362863 116 ntBASIC4.1□□□□□ -1.75
FOXD2O60548 RNY1P16-201ENST00000363063 111 ntBASIC4.1□□□□□ -1.75
FOXD2O60548 U1.1-201ENST00000384101 164 ntBASIC4.1□□□□□ -1.75
FOXD2O60548 RNU1-44P-201ENST00000384453 163 ntBASIC4.1□□□□□ -1.75
FOXD2O60548 RNU6-393P-201ENST00000384475 107 ntBASIC4.1□□□□□ -1.75
FOXD2O60548 RNU6-278P-201ENST00000390945 109 ntBASIC4.1□□□□□ -1.75
FOXD2O60548 MIR1179-201ENST00000408703 91 ntBASIC4.1□□□□□ -1.75
FOXD2O60548 RN7SKP156-201ENST00000410308 342 ntBASIC4.1□□□□□ -1.75
FOXD2O60548 Y_RNA.626-201ENST00000411288 95 ntBASIC4.1□□□□□ -1.75
FOXD2O60548 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC4.1□□□□□ -1.75
FOXD2O60548 AL159169.1-201ENST00000421119 127 ntBASIC4.1□□□□□ -1.75
FOXD2O60548 PPIAP3-201ENST00000450588 505 ntBASIC4.1□□□□□ -1.75
FOXD2O60548 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.1□□□□□ -1.75
FOXD2O60548 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
FOXD2O60548 NDUFB4P10-201ENST00000452541 359 ntBASIC4.1□□□□□ -1.75
FOXD2O60548 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
FOXD2O60548 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.1□□□□□ -1.75
FOXD2O60548 RPL35AP15-201ENST00000468042 339 ntBASIC4.1□□□□□ -1.75
FOXD2O60548 RPL32P34-201ENST00000486380 400 ntBASIC4.1□□□□□ -1.75
FOXD2O60548 FTH1P24-201ENST00000503502 462 ntBASIC4.1□□□□□ -1.75
FOXD2O60548 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC4.1□□□□□ -1.75
FOXD2O60548 AL359273.1-201ENST00000510918 627 ntBASIC4.1□□□□□ -1.75
FOXD2O60548 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.1□□□□□ -1.75
FOXD2O60548 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.1□□□□□ -1.75
FOXD2O60548 Y_RNA.662-201ENST00000516028 97 ntBASIC4.1□□□□□ -1.75
FOXD2O60548 RNU1-95P-201ENST00000516357 160 ntBASIC4.1□□□□□ -1.75
FOXD2O60548 MIR2114-201ENST00000516645 80 ntBASIC4.1□□□□□ -1.75
FOXD2O60548 RNU1-128P-201ENST00000516704 160 ntBASIC4.1□□□□□ -1.75
FOXD2O60548 Y_RNA.713-201ENST00000517013 96 ntBASIC4.1□□□□□ -1.75
FOXD2O60548 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.1□□□□□ -1.75
FOXD2O60548 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.1□□□□□ -1.75
FOXD2O60548 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.1□□□□□ -1.75
FOXD2O60548 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.1□□□□□ -1.75
FOXD2O60548 AC072026.1-201ENST00000605023 201 ntBASIC4.1□□□□□ -1.75
FOXD2O60548 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.1□□□□□ -1.75
FOXD2O60548 U6.106-201ENST00000636360 105 ntBASIC4.1□□□□□ -1.75
FOXD2O60548 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
FOXD2O60548 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
FOXD2O60548 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.1□□□□□ -1.75
FOXD2O60548 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.1□□□□□ -1.75
FOXD2O60548 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
FOXD2O60548 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
FOXD2O60548 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
FOXD2O60548 AP000560.1-201ENST00000624150 1937 ntBASIC4.09□□□□□ -1.75
FOXD2O60548 SNORD81.1-201ENST00000363064 77 ntBASIC4.09□□□□□ -1.75
FOXD2O60548 RNU6-960P-201ENST00000364056 120 ntBASIC4.09□□□□□ -1.75
FOXD2O60548 RNU6-596P-201ENST00000365395 98 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms