Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
GRIN3BO60391 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
GRIN3BO60391 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
GRIN3BO60391 RNA5SP374-201ENST00000362939 125 ntBASIC4.61□□□□□ -1.67
GRIN3BO60391 RNU6-1059P-201ENST00000363752 98 ntBASIC4.61□□□□□ -1.67
GRIN3BO60391 Y_RNA.324-201ENST00000365165 102 ntBASIC4.61□□□□□ -1.67
GRIN3BO60391 SET-203ENST00000372688 801 ntTSL 2 BASIC4.61□□□□□ -1.67
GRIN3BO60391 RNU6ATAC23P-201ENST00000408448 123 ntBASIC4.61□□□□□ -1.67
GRIN3BO60391 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.61□□□□□ -1.67
GRIN3BO60391 AL133396.1-201ENST00000432048 687 ntBASIC4.61□□□□□ -1.67
GRIN3BO60391 HMGB1P12-201ENST00000438594 598 ntBASIC4.61□□□□□ -1.67
GRIN3BO60391 AC083863.1-201ENST00000438811 231 ntBASIC4.61□□□□□ -1.67
GRIN3BO60391 RANP8-201ENST00000444720 713 ntBASIC4.61□□□□□ -1.67
GRIN3BO60391 PCMTD1P1-201ENST00000455560 355 ntBASIC4.61□□□□□ -1.67
GRIN3BO60391 HMGB3P30-201ENST00000457863 606 ntBASIC4.61□□□□□ -1.67
GRIN3BO60391 AL049874.1-201ENST00000489560 388 ntBASIC4.61□□□□□ -1.67
GRIN3BO60391 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.61□□□□□ -1.67
GRIN3BO60391 Y_RNA.721-201ENST00000517207 102 ntBASIC4.61□□□□□ -1.67
GRIN3BO60391 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
GRIN3BO60391 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.61□□□□□ -1.67
GRIN3BO60391 MTND6P33-201ENST00000571794 183 ntBASIC4.61□□□□□ -1.67
GRIN3BO60391 AC005357.1-201ENST00000588399 301 ntBASIC4.61□□□□□ -1.67
GRIN3BO60391 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
GRIN3BO60391 SNRPGP15-201ENST00000600149 222 ntBASIC4.61□□□□□ -1.67
GRIN3BO60391 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.61□□□□□ -1.67
GRIN3BO60391 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC4.61□□□□□ -1.67
GRIN3BO60391 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
GRIN3BO60391 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
GRIN3BO60391 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
GRIN3BO60391 OR4G2P-202ENST00000641004 1759 ntBASIC4.6□□□□□ -1.67
GRIN3BO60391 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.6□□□□□ -1.67
GRIN3BO60391 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
GRIN3BO60391 RNU1-108P-201ENST00000362556 161 ntBASIC4.6□□□□□ -1.67
GRIN3BO60391 Y_RNA.176-201ENST00000363815 109 ntBASIC4.6□□□□□ -1.67
GRIN3BO60391 U3.15-201ENST00000365398 212 ntBASIC4.6□□□□□ -1.67
GRIN3BO60391 RNU6-1179P-201ENST00000384667 107 ntBASIC4.6□□□□□ -1.67
GRIN3BO60391 Y_RNA.645-201ENST00000391229 102 ntBASIC4.6□□□□□ -1.67
GRIN3BO60391 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.6□□□□□ -1.67
GRIN3BO60391 EIF4EP1-201ENST00000422311 642 ntBASIC4.6□□□□□ -1.67
GRIN3BO60391 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.6□□□□□ -1.67
GRIN3BO60391 AC096644.2-201ENST00000429278 159 ntBASIC4.6□□□□□ -1.67
GRIN3BO60391 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.6□□□□□ -1.67
GRIN3BO60391 AC011005.2-201ENST00000487324 359 ntBASIC4.6□□□□□ -1.67
GRIN3BO60391 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.6□□□□□ -1.67
GRIN3BO60391 AC104576.1-201ENST00000524225 88 ntBASIC4.6□□□□□ -1.67
GRIN3BO60391 AC084851.1-201ENST00000529105 249 ntBASIC4.6□□□□□ -1.67
GRIN3BO60391 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.6□□□□□ -1.67
GRIN3BO60391 AC109446.1-201ENST00000566172 220 ntBASIC4.6□□□□□ -1.67
GRIN3BO60391 AC113195.1-201ENST00000579952 141 ntBASIC4.6□□□□□ -1.67
GRIN3BO60391 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.6□□□□□ -1.67
GRIN3BO60391 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.6□□□□□ -1.67
GRIN3BO60391 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.6□□□□□ -1.67
GRIN3BO60391 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.6□□□□□ -1.67
GRIN3BO60391 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
GRIN3BO60391 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
GRIN3BO60391 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
GRIN3BO60391 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
GRIN3BO60391 Y_RNA.33-201ENST00000362591 102 ntBASIC4.59□□□□□ -1.67
GRIN3BO60391 RNU6-512P-201ENST00000364438 103 ntBASIC4.59□□□□□ -1.67
GRIN3BO60391 AL133412.1-201ENST00000380194 2992 ntBASIC4.59□□□□□ -1.67
GRIN3BO60391 SNORD73A-201ENST00000386062 65 ntBASIC4.59□□□□□ -1.67
GRIN3BO60391 AL445529.1-201ENST00000398713 389 ntBASIC4.59□□□□□ -1.67
GRIN3BO60391 RNU6-174P-201ENST00000410406 106 ntBASIC4.59□□□□□ -1.67
GRIN3BO60391 AL030996.1-201ENST00000411430 235 ntBASIC4.59□□□□□ -1.67
GRIN3BO60391 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.59□□□□□ -1.67
GRIN3BO60391 RPL23AP50-201ENST00000434149 455 ntBASIC4.59□□□□□ -1.67
GRIN3BO60391 AC010285.1-201ENST00000470580 392 ntBASIC4.59□□□□□ -1.67
GRIN3BO60391 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC4.59□□□□□ -1.67
GRIN3BO60391 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
GRIN3BO60391 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.59□□□□□ -1.67
GRIN3BO60391 RNU1-86P-201ENST00000516108 154 ntBASIC4.59□□□□□ -1.67
GRIN3BO60391 MIR892C-201ENST00000516410 77 ntBASIC4.59□□□□□ -1.67
GRIN3BO60391 RNU1-107P-201ENST00000516617 154 ntBASIC4.59□□□□□ -1.67
GRIN3BO60391 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
GRIN3BO60391 ATP5F1P5-201ENST00000526403 760 ntBASIC4.59□□□□□ -1.67
GRIN3BO60391 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.59□□□□□ -1.67
GRIN3BO60391 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
GRIN3BO60391 TRAV37-201ENST00000553906 342 ntBASIC4.59□□□□□ -1.67
GRIN3BO60391 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.59□□□□□ -1.67
GRIN3BO60391 AC092447.9-201ENST00000603395 144 ntBASIC4.59□□□□□ -1.67
GRIN3BO60391 AC016727.2-201ENST00000603988 621 ntBASIC4.59□□□□□ -1.67
GRIN3BO60391 AC104695.3-201ENST00000604052 296 ntBASIC4.59□□□□□ -1.67
GRIN3BO60391 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
GRIN3BO60391 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
GRIN3BO60391 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
GRIN3BO60391 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
GRIN3BO60391 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
GRIN3BO60391 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
GRIN3BO60391 MIR1290-201ENST00000408735 78 ntBASIC4.58□□□□□ -1.68
GRIN3BO60391 SNORA3C-201ENST00000408792 125 ntBASIC4.58□□□□□ -1.68
GRIN3BO60391 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
GRIN3BO60391 NDUFB4P7-201ENST00000423198 363 ntBASIC4.58□□□□□ -1.68
GRIN3BO60391 USP9YP7-201ENST00000436723 430 ntBASIC4.58□□□□□ -1.68
GRIN3BO60391 USP9YP32-201ENST00000452432 430 ntBASIC4.58□□□□□ -1.68
GRIN3BO60391 AC008571.1-201ENST00000467232 300 ntBASIC4.58□□□□□ -1.68
GRIN3BO60391 RPS23P3-201ENST00000470993 430 ntBASIC4.58□□□□□ -1.68
GRIN3BO60391 S100A11P1-201ENST00000477525 312 ntBASIC4.58□□□□□ -1.68
GRIN3BO60391 AC018437.1-201ENST00000492214 406 ntBASIC4.58□□□□□ -1.68
GRIN3BO60391 PPBPP1-201ENST00000510807 373 ntBASIC4.58□□□□□ -1.68
GRIN3BO60391 RNU6-120P-201ENST00000516077 103 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms