Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 AP001486.3-201ENST00000615334 372 ntBASIC3.34□□□□□ -1.87
NPHP1O15259 AC009509.4-201ENST00000619202 509 ntBASIC3.34□□□□□ -1.87
NPHP1O15259 MIR7843-201ENST00000622274 79 ntBASIC3.34□□□□□ -1.87
NPHP1O15259 AL359740.1-201ENST00000624340 592 ntBASIC3.34□□□□□ -1.87
NPHP1O15259 AC090582.1-201ENST00000636321 199 ntBASIC3.34□□□□□ -1.87
NPHP1O15259 LRRC77P-213ENST00000637727 880 ntBASIC3.34□□□□□ -1.87
NPHP1O15259 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NPHP1O15259 MIR412-201ENST00000362142 91 ntBASIC3.33□□□□□ -1.88
NPHP1O15259 RNU6-181P-201ENST00000363225 107 ntBASIC3.33□□□□□ -1.88
NPHP1O15259 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.33□□□□□ -1.88
NPHP1O15259 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.33□□□□□ -1.88
NPHP1O15259 MTCO2P34-201ENST00000421994 607 ntBASIC3.33□□□□□ -1.88
NPHP1O15259 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.33□□□□□ -1.88
NPHP1O15259 AC003982.1-202ENST00000469928 248 ntBASIC3.33□□□□□ -1.88
NPHP1O15259 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NPHP1O15259 SRIP1-201ENST00000489235 288 ntBASIC3.33□□□□□ -1.88
NPHP1O15259 MTND4P2-201ENST00000507767 1203 ntBASIC3.33□□□□□ -1.88
NPHP1O15259 RNU6-445P-201ENST00000516949 107 ntBASIC3.33□□□□□ -1.88
NPHP1O15259 MTCO2P4-201ENST00000517968 247 ntBASIC3.33□□□□□ -1.88
NPHP1O15259 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.33□□□□□ -1.88
NPHP1O15259 RANP3-201ENST00000530970 276 ntBASIC3.33□□□□□ -1.88
NPHP1O15259 OR5AL2P-201ENST00000532185 920 ntBASIC3.33□□□□□ -1.88
NPHP1O15259 AL512310.1-201ENST00000548639 172 ntBASIC3.33□□□□□ -1.88
NPHP1O15259 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.33□□□□□ -1.88
NPHP1O15259 MIR3117-201ENST00000584034 78 ntBASIC3.33□□□□□ -1.88
NPHP1O15259 AC005332.10-201ENST00000612725 619 ntBASIC3.33□□□□□ -1.88
NPHP1O15259 AC010338.1-201ENST00000621823 717 ntBASIC3.33□□□□□ -1.88
NPHP1O15259 AL390237.1-201ENST00000404226 1415 ntBASIC3.33□□□□□ -1.88
NPHP1O15259 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NPHP1O15259 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
NPHP1O15259 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.32□□□□□ -1.88
NPHP1O15259 AC080128.1-201ENST00000474389 1917 ntBASIC3.32□□□□□ -1.88
NPHP1O15259 HSPA8P4-201ENST00000511877 1920 ntBASIC3.32□□□□□ -1.88
NPHP1O15259 RPL9P7-201ENST00000330965 580 ntBASIC3.32□□□□□ -1.88
NPHP1O15259 RNU6-1280P-201ENST00000365211 107 ntBASIC3.32□□□□□ -1.88
NPHP1O15259 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NPHP1O15259 MIR454-201ENST00000390180 115 ntBASIC3.32□□□□□ -1.88
NPHP1O15259 RNU2-25P-201ENST00000411041 191 ntBASIC3.32□□□□□ -1.88
NPHP1O15259 Y_RNA.623-201ENST00000411128 95 ntBASIC3.32□□□□□ -1.88
NPHP1O15259 RNA5SP111-201ENST00000411386 101 ntBASIC3.32□□□□□ -1.88
NPHP1O15259 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.32□□□□□ -1.88
NPHP1O15259 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.32□□□□□ -1.88
NPHP1O15259 MTCO3P5-201ENST00000433620 714 ntBASIC3.32□□□□□ -1.88
NPHP1O15259 MTND4P32-201ENST00000437189 1237 ntBASIC3.32□□□□□ -1.88
NPHP1O15259 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.32□□□□□ -1.88
NPHP1O15259 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.32□□□□□ -1.88
NPHP1O15259 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NPHP1O15259 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.32□□□□□ -1.88
NPHP1O15259 C1DP4-201ENST00000455429 424 ntBASIC3.32□□□□□ -1.88
NPHP1O15259 snoU13.26-201ENST00000459452 105 ntBASIC3.32□□□□□ -1.88
NPHP1O15259 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.32□□□□□ -1.88
NPHP1O15259 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NPHP1O15259 AC008549.1-201ENST00000512900 643 ntBASIC3.32□□□□□ -1.88
NPHP1O15259 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.32□□□□□ -1.88
NPHP1O15259 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.32□□□□□ -1.88
NPHP1O15259 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.32□□□□□ -1.88
NPHP1O15259 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.32□□□□□ -1.88
NPHP1O15259 AC006362.1-201ENST00000567392 174 ntBASIC3.32□□□□□ -1.88
NPHP1O15259 AC008121.1-201ENST00000603244 268 ntBASIC3.32□□□□□ -1.88
NPHP1O15259 Z84480.1-201ENST00000605131 311 ntBASIC3.32□□□□□ -1.88
NPHP1O15259 AL670379.4-201ENST00000605279 254 ntBASIC3.32□□□□□ -1.88
NPHP1O15259 AL020991.1-201ENST00000612314 373 ntBASIC3.32□□□□□ -1.88
NPHP1O15259 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
NPHP1O15259 AL355596.1-201ENST00000565399 3996 ntBASIC3.32□□□□□ -1.88
NPHP1O15259 AC093536.2-201ENST00000565257 1406 ntBASIC3.32□□□□□ -1.88
NPHP1O15259 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NPHP1O15259 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.32□□□□□ -1.88
NPHP1O15259 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.32□□□□□ -1.88
NPHP1O15259 SNORA62.1-201ENST00000364287 154 ntBASIC3.31□□□□□ -1.88
NPHP1O15259 MIR578-201ENST00000384828 96 ntBASIC3.31□□□□□ -1.88
NPHP1O15259 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
NPHP1O15259 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.31□□□□□ -1.88
NPHP1O15259 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.31□□□□□ -1.88
NPHP1O15259 AL358934.1-201ENST00000432346 324 ntBASIC3.31□□□□□ -1.88
NPHP1O15259 AC112220.1-201ENST00000434628 355 ntBASIC3.31□□□□□ -1.88
NPHP1O15259 AC004383.1-201ENST00000438135 289 ntBASIC3.31□□□□□ -1.88
NPHP1O15259 AL445687.1-201ENST00000439946 251 ntBASIC3.31□□□□□ -1.88
NPHP1O15259 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.31□□□□□ -1.88
NPHP1O15259 AC098799.2-201ENST00000509466 868 ntBASIC3.31□□□□□ -1.88
NPHP1O15259 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.31□□□□□ -1.88
NPHP1O15259 RNU1-41P-201ENST00000516161 162 ntBASIC3.31□□□□□ -1.88
NPHP1O15259 RNU1-48P-201ENST00000516400 162 ntBASIC3.31□□□□□ -1.88
NPHP1O15259 ACA59.2-201ENST00000517061 156 ntBASIC3.31□□□□□ -1.88
NPHP1O15259 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.31□□□□□ -1.88
NPHP1O15259 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.31□□□□□ -1.88
NPHP1O15259 MIR4635-201ENST00000583759 79 ntBASIC3.31□□□□□ -1.88
NPHP1O15259 PIGPP4-201ENST00000584447 307 ntBASIC3.31□□□□□ -1.88
NPHP1O15259 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.31□□□□□ -1.88
NPHP1O15259 AC068790.2-201ENST00000602601 557 ntBASIC3.31□□□□□ -1.88
NPHP1O15259 AL627309.6-201ENST00000606857 840 ntBASIC3.31□□□□□ -1.88
NPHP1O15259 uc_338.14-201ENST00000613162 166 ntBASIC3.31□□□□□ -1.88
NPHP1O15259 AC011155.2-201ENST00000623202 216 ntBASIC3.31□□□□□ -1.88
NPHP1O15259 CTSLP2-204ENST00000629029 392 ntBASIC3.31□□□□□ -1.88
NPHP1O15259 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NPHP1O15259 RNU6-371P-201ENST00000364283 108 ntBASIC3.3□□□□□ -1.88
NPHP1O15259 RNU1-100P-201ENST00000365255 165 ntBASIC3.3□□□□□ -1.88
NPHP1O15259 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.3□□□□□ -1.88
NPHP1O15259 RNU6-456P-201ENST00000384493 107 ntBASIC3.3□□□□□ -1.88
NPHP1O15259 RNU6-748P-201ENST00000384648 107 ntBASIC3.3□□□□□ -1.88
NPHP1O15259 MIR181A2-201ENST00000384863 110 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms