Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC068338.1-201ENST00000565567 176 ntBASIC1.13□□□□□ -2.23
SDCBPO00560 MTND3P13-201ENST00000574391 343 ntBASIC1.13□□□□□ -2.23
SDCBPO00560 MIR4713-201ENST00000582691 75 ntBASIC1.13□□□□□ -2.23
SDCBPO00560 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.13□□□□□ -2.23
SDCBPO00560 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
SDCBPO00560 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.13□□□□□ -2.23
SDCBPO00560 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.13□□□□□ -2.23
SDCBPO00560 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.13□□□□□ -2.23
SDCBPO00560 ZNF209P-201ENST00000593450 2304 ntBASIC1.12□□□□□ -2.23
SDCBPO00560 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
SDCBPO00560 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.12□□□□□ -2.23
SDCBPO00560 RNU6-898P-201ENST00000365627 104 ntBASIC1.12□□□□□ -2.23
SDCBPO00560 RNU6-224P-201ENST00000384055 107 ntBASIC1.12□□□□□ -2.23
SDCBPO00560 MIR518D-201ENST00000385014 87 ntBASIC1.12□□□□□ -2.23
SDCBPO00560 RNU2-48P-201ENST00000410694 191 ntBASIC1.12□□□□□ -2.23
SDCBPO00560 MTND4P3-201ENST00000417829 541 ntBASIC1.12□□□□□ -2.23
SDCBPO00560 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.12□□□□□ -2.23
SDCBPO00560 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.12□□□□□ -2.23
SDCBPO00560 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.12□□□□□ -2.23
SDCBPO00560 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.12□□□□□ -2.23
SDCBPO00560 HMGN2P23-201ENST00000456759 269 ntBASIC1.12□□□□□ -2.23
SDCBPO00560 AC117503.1-201ENST00000472241 394 ntBASIC1.12□□□□□ -2.23
SDCBPO00560 AC021146.8-201ENST00000507455 733 ntBASIC1.12□□□□□ -2.23
SDCBPO00560 RNU6-64P-201ENST00000517119 105 ntBASIC1.12□□□□□ -2.23
SDCBPO00560 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.12□□□□□ -2.23
SDCBPO00560 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.12□□□□□ -2.23
SDCBPO00560 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.12□□□□□ -2.23
SDCBPO00560 CYCSP27-201ENST00000527643 293 ntBASIC1.12□□□□□ -2.23
SDCBPO00560 NDUFA5P6-201ENST00000542110 379 ntBASIC1.12□□□□□ -2.23
SDCBPO00560 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.12□□□□□ -2.23
SDCBPO00560 AC023813.2-201ENST00000564321 469 ntBASIC1.12□□□□□ -2.23
SDCBPO00560 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.12□□□□□ -2.23
SDCBPO00560 AL356432.3-201ENST00000568952 465 ntBASIC1.12□□□□□ -2.23
SDCBPO00560 MIR4303-201ENST00000581299 66 ntBASIC1.12□□□□□ -2.23
SDCBPO00560 AC009977.1-201ENST00000586015 570 ntBASIC1.12□□□□□ -2.23
SDCBPO00560 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.12□□□□□ -2.23
SDCBPO00560 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.12□□□□□ -2.23
SDCBPO00560 RMST_6.1-201ENST00000611980 203 ntBASIC1.12□□□□□ -2.23
SDCBPO00560 AP000676.3-201ENST00000623299 569 ntBASIC1.12□□□□□ -2.23
SDCBPO00560 AL136313.1-201ENST00000624804 202 ntBASIC1.12□□□□□ -2.23
SDCBPO00560 AP003485.1-201ENST00000625093 753 ntBASIC1.12□□□□□ -2.23
SDCBPO00560 U6.99-201ENST00000637524 83 ntBASIC1.12□□□□□ -2.23
SDCBPO00560 ZNF72P-201ENST00000425869 1908 ntBASIC1.11□□□□□ -2.23
SDCBPO00560 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.11□□□□□ -2.23
SDCBPO00560 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
SDCBPO00560 SNORA63.3-201ENST00000362682 132 ntBASIC1.11□□□□□ -2.23
SDCBPO00560 SNORA40.19-201ENST00000390846 128 ntBASIC1.11□□□□□ -2.23
SDCBPO00560 RN7SKP284-201ENST00000411002 343 ntBASIC1.11□□□□□ -2.23
SDCBPO00560 AC127391.1-201ENST00000411737 98 ntBASIC1.11□□□□□ -2.23
SDCBPO00560 AL449283.1-202ENST00000418249 604 ntBASIC1.11□□□□□ -2.23
SDCBPO00560 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.11□□□□□ -2.23
SDCBPO00560 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.11□□□□□ -2.23
SDCBPO00560 AC104651.1-201ENST00000427559 735 ntBASIC1.11□□□□□ -2.23
SDCBPO00560 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.11□□□□□ -2.23
SDCBPO00560 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.11□□□□□ -2.23
SDCBPO00560 AC015922.2-201ENST00000435593 184 ntBASIC1.11□□□□□ -2.23
SDCBPO00560 AL121601.2-201ENST00000438019 707 ntBASIC1.11□□□□□ -2.23
SDCBPO00560 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.11□□□□□ -2.23
SDCBPO00560 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.11□□□□□ -2.23
SDCBPO00560 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.11□□□□□ -2.23
SDCBPO00560 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.11□□□□□ -2.23
SDCBPO00560 AC104629.1-201ENST00000494226 508 ntBASIC1.11□□□□□ -2.23
SDCBPO00560 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.11□□□□□ -2.23
SDCBPO00560 AC108210.2-201ENST00000503681 201 ntBASIC1.11□□□□□ -2.23
SDCBPO00560 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.11□□□□□ -2.23
SDCBPO00560 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.11□□□□□ -2.23
SDCBPO00560 AC117532.1-201ENST00000514638 323 ntBASIC1.11□□□□□ -2.23
SDCBPO00560 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
SDCBPO00560 AL161670.1-201ENST00000554348 137 ntBASIC1.11□□□□□ -2.23
SDCBPO00560 AL136520.1-202ENST00000555494 763 ntBASIC1.11□□□□□ -2.23
SDCBPO00560 ELOCP5-201ENST00000604924 333 ntBASIC1.11□□□□□ -2.23
SDCBPO00560 AC016925.2-201ENST00000605108 242 ntBASIC1.11□□□□□ -2.23
SDCBPO00560 AC024060.1-201ENST00000607052 494 ntBASIC1.11□□□□□ -2.23
SDCBPO00560 AC092953.2-201ENST00000608000 699 ntBASIC1.11□□□□□ -2.23
SDCBPO00560 AC021755.4-201ENST00000616620 456 ntBASIC1.11□□□□□ -2.23
SDCBPO00560 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.11□□□□□ -2.23
SDCBPO00560 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.11□□□□□ -2.23
SDCBPO00560 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.11□□□□□ -2.23
SDCBPO00560 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.11□□□□□ -2.23
SDCBPO00560 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
SDCBPO00560 SNORD115-3-201ENST00000363100 82 ntBASIC1.1□□□□□ -2.23
SDCBPO00560 RNU6-457P-201ENST00000363999 107 ntBASIC1.1□□□□□ -2.23
SDCBPO00560 RNU6-1280P-201ENST00000365211 107 ntBASIC1.1□□□□□ -2.23
SDCBPO00560 MIR764-201ENST00000390811 85 ntBASIC1.1□□□□□ -2.23
SDCBPO00560 MIR934-201ENST00000401241 83 ntBASIC1.1□□□□□ -2.23
SDCBPO00560 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.1□□□□□ -2.23
SDCBPO00560 AC008267.5-201ENST00000424928 265 ntBASIC1.1□□□□□ -2.23
SDCBPO00560 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.1□□□□□ -2.23
SDCBPO00560 AL592045.1-201ENST00000429867 352 ntBASIC1.1□□□□□ -2.23
SDCBPO00560 AP000949.1-201ENST00000438328 629 ntBASIC1.1□□□□□ -2.23
SDCBPO00560 MTND2P29-201ENST00000438595 412 ntBASIC1.1□□□□□ -2.23
SDCBPO00560 BRK1P2-201ENST00000442875 223 ntBASIC1.1□□□□□ -2.23
SDCBPO00560 MTCO1P27-201ENST00000448269 226 ntBASIC1.1□□□□□ -2.23
SDCBPO00560 AL137159.1-201ENST00000452808 512 ntBASIC1.1□□□□□ -2.23
SDCBPO00560 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.1□□□□□ -2.23
SDCBPO00560 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC1.1□□□□□ -2.23
SDCBPO00560 AC023194.1-201ENST00000493084 308 ntBASIC1.1□□□□□ -2.23
SDCBPO00560 TPT1P8-201ENST00000510120 555 ntBASIC1.1□□□□□ -2.23
SDCBPO00560 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.1□□□□□ -2.23
SDCBPO00560 AP006587.4-201ENST00000526053 529 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms