Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AL359851.1-201ENST00000569460 4997 ntBASIC1.66□□□□□ -2.14
SMKR1H3BMG3 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.66□□□□□ -2.14
SMKR1H3BMG3 RNU5F-7P-201ENST00000363696 115 ntBASIC1.66□□□□□ -2.14
SMKR1H3BMG3 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SMKR1H3BMG3 SNORA24.1-201ENST00000384401 135 ntBASIC1.66□□□□□ -2.14
SMKR1H3BMG3 SNORA44-201ENST00000384584 132 ntBASIC1.66□□□□□ -2.14
SMKR1H3BMG3 RNU6-1179P-201ENST00000384667 107 ntBASIC1.66□□□□□ -2.14
SMKR1H3BMG3 MIR558-201ENST00000384920 94 ntBASIC1.66□□□□□ -2.14
SMKR1H3BMG3 RNU6ATAC10P-201ENST00000408635 111 ntBASIC1.66□□□□□ -2.14
SMKR1H3BMG3 RNU2-52P-201ENST00000410680 190 ntBASIC1.66□□□□□ -2.14
SMKR1H3BMG3 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.66□□□□□ -2.14
SMKR1H3BMG3 AL031779.1-201ENST00000415663 330 ntBASIC1.66□□□□□ -2.14
SMKR1H3BMG3 AC096920.1-201ENST00000423991 241 ntBASIC1.66□□□□□ -2.14
SMKR1H3BMG3 MTCO3P5-201ENST00000433620 714 ntBASIC1.66□□□□□ -2.14
SMKR1H3BMG3 DNAJC19P4-201ENST00000440115 345 ntBASIC1.66□□□□□ -2.14
SMKR1H3BMG3 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.66□□□□□ -2.14
SMKR1H3BMG3 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC1.66□□□□□ -2.14
SMKR1H3BMG3 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.66□□□□□ -2.14
SMKR1H3BMG3 RPL23AP3-201ENST00000453844 468 ntBASIC1.66□□□□□ -2.14
SMKR1H3BMG3 PMCHL2-203ENST00000457791 237 ntBASIC1.66□□□□□ -2.14
SMKR1H3BMG3 SNORD109B-201ENST00000458961 67 ntBASIC1.66□□□□□ -2.14
SMKR1H3BMG3 RNU6-717P-201ENST00000459076 104 ntBASIC1.66□□□□□ -2.14
SMKR1H3BMG3 SNORD109A-201ENST00000459128 67 ntBASIC1.66□□□□□ -2.14
SMKR1H3BMG3 SNORA84-201ENST00000459229 133 ntBASIC1.66□□□□□ -2.14
SMKR1H3BMG3 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC1.66□□□□□ -2.14
SMKR1H3BMG3 AP001025.1-201ENST00000486139 332 ntBASIC1.66□□□□□ -2.14
SMKR1H3BMG3 HMGB1P35-201ENST00000503360 598 ntBASIC1.66□□□□□ -2.14
SMKR1H3BMG3 AC091965.2-201ENST00000512324 613 ntBASIC1.66□□□□□ -2.14
SMKR1H3BMG3 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.66□□□□□ -2.14
SMKR1H3BMG3 AC022878.1-201ENST00000530684 149 ntBASIC1.66□□□□□ -2.14
SMKR1H3BMG3 RANP3-201ENST00000530970 276 ntBASIC1.66□□□□□ -2.14
SMKR1H3BMG3 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
SMKR1H3BMG3 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
SMKR1H3BMG3 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
SMKR1H3BMG3 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SMKR1H3BMG3 AL627230.6-201ENST00000611129 280 ntBASIC1.66□□□□□ -2.14
SMKR1H3BMG3 AL050303.3-201ENST00000613704 284 ntBASIC1.66□□□□□ -2.14
SMKR1H3BMG3 AC084757.4-201ENST00000616350 526 ntBASIC1.66□□□□□ -2.14
SMKR1H3BMG3 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.66□□□□□ -2.14
SMKR1H3BMG3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SMKR1H3BMG3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
SMKR1H3BMG3 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
SMKR1H3BMG3 OR4G2P-201ENST00000328113 903 ntBASIC1.65□□□□□ -2.15
SMKR1H3BMG3 RNA5SP276-201ENST00000362580 94 ntBASIC1.65□□□□□ -2.15
SMKR1H3BMG3 RNU6-529P-201ENST00000363383 104 ntBASIC1.65□□□□□ -2.15
SMKR1H3BMG3 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
SMKR1H3BMG3 SNORD116-20-201ENST00000384529 92 ntBASIC1.65□□□□□ -2.15
SMKR1H3BMG3 MIR578-201ENST00000384828 96 ntBASIC1.65□□□□□ -2.15
SMKR1H3BMG3 MIR518A2-201ENST00000384966 87 ntBASIC1.65□□□□□ -2.15
SMKR1H3BMG3 RNA5SP390-201ENST00000410191 113 ntBASIC1.65□□□□□ -2.15
SMKR1H3BMG3 RNA5SP450-201ENST00000411206 102 ntBASIC1.65□□□□□ -2.15
SMKR1H3BMG3 AC096664.2-201ENST00000411843 406 ntBASIC1.65□□□□□ -2.15
SMKR1H3BMG3 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.65□□□□□ -2.15
SMKR1H3BMG3 AC013410.2-201ENST00000422627 201 ntBASIC1.65□□□□□ -2.15
SMKR1H3BMG3 AL356583.2-201ENST00000426536 280 ntBASIC1.65□□□□□ -2.15
SMKR1H3BMG3 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC1.65□□□□□ -2.15
SMKR1H3BMG3 USP9YP12-201ENST00000450481 570 ntBASIC1.65□□□□□ -2.15
SMKR1H3BMG3 AL137159.1-201ENST00000452808 512 ntBASIC1.65□□□□□ -2.15
SMKR1H3BMG3 ZNF114P1-201ENST00000453500 292 ntBASIC1.65□□□□□ -2.15
SMKR1H3BMG3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.65□□□□□ -2.15
SMKR1H3BMG3 AC006026.2-201ENST00000457376 180 ntBASIC1.65□□□□□ -2.15
SMKR1H3BMG3 AC090255.1-201ENST00000495779 349 ntBASIC1.65□□□□□ -2.15
SMKR1H3BMG3 Y_RNA.672-201ENST00000516289 104 ntBASIC1.65□□□□□ -2.15
SMKR1H3BMG3 SNORA31.23-201ENST00000517219 133 ntBASIC1.65□□□□□ -2.15
SMKR1H3BMG3 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.65□□□□□ -2.15
SMKR1H3BMG3 RPL7P20-201ENST00000520308 745 ntBASIC1.65□□□□□ -2.15
SMKR1H3BMG3 HMGN1P30-201ENST00000589286 268 ntBASIC1.65□□□□□ -2.15
SMKR1H3BMG3 AC008749.1-201ENST00000597650 306 ntBASIC1.65□□□□□ -2.15
SMKR1H3BMG3 AL109918.3-201ENST00000603072 338 ntBASIC1.65□□□□□ -2.15
SMKR1H3BMG3 AL353778.1-201ENST00000603149 408 ntBASIC1.65□□□□□ -2.15
SMKR1H3BMG3 AC112191.3-201ENST00000604371 277 ntBASIC1.65□□□□□ -2.15
SMKR1H3BMG3 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.65□□□□□ -2.15
SMKR1H3BMG3 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.65□□□□□ -2.15
SMKR1H3BMG3 MIR8057-201ENST00000620957 69 ntBASIC1.65□□□□□ -2.15
SMKR1H3BMG3 AL157786.1-207ENST00000627771 695 ntBASIC1.65□□□□□ -2.15
SMKR1H3BMG3 OR8B1P-202ENST00000641132 1178 ntBASIC1.65□□□□□ -2.15
SMKR1H3BMG3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
SMKR1H3BMG3 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.65□□□□□ -2.15
SMKR1H3BMG3 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
SMKR1H3BMG3 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
SMKR1H3BMG3 SNORA71.3-201ENST00000362582 128 ntBASIC1.64□□□□□ -2.15
SMKR1H3BMG3 RNU6-655P-201ENST00000362858 107 ntBASIC1.64□□□□□ -2.15
SMKR1H3BMG3 RNU6-641P-201ENST00000384006 107 ntBASIC1.64□□□□□ -2.15
SMKR1H3BMG3 MIR518C-201ENST00000384822 101 ntBASIC1.64□□□□□ -2.15
SMKR1H3BMG3 RPL23AP32-201ENST00000395315 459 ntBASIC1.64□□□□□ -2.15
SMKR1H3BMG3 RNA5SP338-201ENST00000410495 85 ntBASIC1.64□□□□□ -2.15
SMKR1H3BMG3 RNU2-8P-201ENST00000410727 190 ntBASIC1.64□□□□□ -2.15
SMKR1H3BMG3 MTND1P23-201ENST00000416931 372 ntBASIC1.64□□□□□ -2.15
SMKR1H3BMG3 AC074117.2-201ENST00000417130 397 ntBASIC1.64□□□□□ -2.15
SMKR1H3BMG3 AL139413.1-201ENST00000421309 217 ntBASIC1.64□□□□□ -2.15
SMKR1H3BMG3 AL365400.1-201ENST00000431854 640 ntBASIC1.64□□□□□ -2.15
SMKR1H3BMG3 AC105272.1-201ENST00000438604 198 ntBASIC1.64□□□□□ -2.15
SMKR1H3BMG3 AL353689.1-201ENST00000438895 199 ntBASIC1.64□□□□□ -2.15
SMKR1H3BMG3 MTND6P13-201ENST00000443510 523 ntBASIC1.64□□□□□ -2.15
SMKR1H3BMG3 EPS15P1-201ENST00000448836 336 ntBASIC1.64□□□□□ -2.15
SMKR1H3BMG3 RPL23AP7-203ENST00000449021 469 ntBASIC1.64□□□□□ -2.15
SMKR1H3BMG3 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.64□□□□□ -2.15
SMKR1H3BMG3 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.64□□□□□ -2.15
SMKR1H3BMG3 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.64□□□□□ -2.15
SMKR1H3BMG3 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms