Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 GZMAP1-201ENST00000503054 631 ntBASIC2.54□□□□□ -2
NPIPA3F8WFD2 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.54□□□□□ -2
NPIPA3F8WFD2 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.54□□□□□ -2
NPIPA3F8WFD2 AC079600.2-201ENST00000550076 130 ntBASIC2.54□□□□□ -2
NPIPA3F8WFD2 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.54□□□□□ -2
NPIPA3F8WFD2 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.54□□□□□ -2
NPIPA3F8WFD2 MIR3162-201ENST00000581818 82 ntBASIC2.54□□□□□ -2
NPIPA3F8WFD2 AC103987.3-201ENST00000582071 292 ntBASIC2.54□□□□□ -2
NPIPA3F8WFD2 MIR4298-201ENST00000584380 73 ntBASIC2.54□□□□□ -2
NPIPA3F8WFD2 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.54□□□□□ -2
NPIPA3F8WFD2 NDUFA8P1-201ENST00000605525 367 ntBASIC2.54□□□□□ -2
NPIPA3F8WFD2 AC104073.3-201ENST00000610942 955 ntBASIC2.54□□□□□ -2
NPIPA3F8WFD2 MIR6134-201ENST00000617606 109 ntBASIC2.54□□□□□ -2
NPIPA3F8WFD2 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.54□□□□□ -2
NPIPA3F8WFD2 AC084035.1-201ENST00000634543 607 ntBASIC2.54□□□□□ -2
NPIPA3F8WFD2 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.54□□□□□ -2
NPIPA3F8WFD2 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
NPIPA3F8WFD2 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
NPIPA3F8WFD2 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
NPIPA3F8WFD2 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
NPIPA3F8WFD2 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC2.54□□□□□ -2
NPIPA3F8WFD2 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.54□□□□□ -2
NPIPA3F8WFD2 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
NPIPA3F8WFD2 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
NPIPA3F8WFD2 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
NPIPA3F8WFD2 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
NPIPA3F8WFD2 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.53□□□□□ -2
NPIPA3F8WFD2 AC062016.1-201ENST00000355719 319 ntBASIC2.53□□□□□ -2
NPIPA3F8WFD2 RNU6-371P-201ENST00000364283 108 ntBASIC2.53□□□□□ -2
NPIPA3F8WFD2 RNU4-75P-201ENST00000364621 146 ntBASIC2.53□□□□□ -2
NPIPA3F8WFD2 RNU6-259P-201ENST00000383999 107 ntBASIC2.53□□□□□ -2
NPIPA3F8WFD2 RNU6-19P-201ENST00000384718 107 ntBASIC2.53□□□□□ -2
NPIPA3F8WFD2 AC068050.1-201ENST00000394891 380 ntBASIC2.53□□□□□ -2
NPIPA3F8WFD2 RNU2-52P-201ENST00000410680 190 ntBASIC2.53□□□□□ -2
NPIPA3F8WFD2 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.53□□□□□ -2
NPIPA3F8WFD2 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.53□□□□□ -2
NPIPA3F8WFD2 snoU109.2-201ENST00000459316 135 ntBASIC2.53□□□□□ -2
NPIPA3F8WFD2 AC108078.1-201ENST00000508073 725 ntBASIC2.53□□□□□ -2
NPIPA3F8WFD2 AC116655.1-201ENST00000508324 901 ntBASIC2.53□□□□□ -2
NPIPA3F8WFD2 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.53□□□□□ -2
NPIPA3F8WFD2 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.53□□□□□ -2
NPIPA3F8WFD2 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.53□□□□□ -2
NPIPA3F8WFD2 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.53□□□□□ -2
NPIPA3F8WFD2 MTCO3P13-201ENST00000577757 781 ntBASIC2.53□□□□□ -2
NPIPA3F8WFD2 AC103810.1-201ENST00000579873 453 ntBASIC2.53□□□□□ -2
NPIPA3F8WFD2 OR1M4P-201ENST00000589199 287 ntBASIC2.53□□□□□ -2
NPIPA3F8WFD2 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.53□□□□□ -2
NPIPA3F8WFD2 AL391813.1-201ENST00000603098 260 ntBASIC2.53□□□□□ -2
NPIPA3F8WFD2 AL391646.1-201ENST00000603860 190 ntBASIC2.53□□□□□ -2
NPIPA3F8WFD2 AC091152.3-201ENST00000604227 325 ntBASIC2.53□□□□□ -2
NPIPA3F8WFD2 AC008945.2-201ENST00000606056 604 ntBASIC2.53□□□□□ -2
NPIPA3F8WFD2 AL627309.6-201ENST00000606857 840 ntBASIC2.53□□□□□ -2
NPIPA3F8WFD2 AC090115.4-201ENST00000609970 188 ntBASIC2.53□□□□□ -2
NPIPA3F8WFD2 AL359198.2-201ENST00000611836 194 ntBASIC2.53□□□□□ -2
NPIPA3F8WFD2 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
NPIPA3F8WFD2 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.53□□□□□ -2.01
NPIPA3F8WFD2 MTND5P26-201ENST00000426018 1752 ntBASIC2.52□□□□□ -2.01
NPIPA3F8WFD2 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
NPIPA3F8WFD2 Y_RNA.1-201ENST00000352915 104 ntBASIC2.52□□□□□ -2.01
NPIPA3F8WFD2 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
NPIPA3F8WFD2 MIR412-201ENST00000362142 91 ntBASIC2.52□□□□□ -2.01
NPIPA3F8WFD2 SNORA68.1-201ENST00000364537 132 ntBASIC2.52□□□□□ -2.01
NPIPA3F8WFD2 RN7SKP226-201ENST00000364912 300 ntBASIC2.52□□□□□ -2.01
NPIPA3F8WFD2 RNU6-1180P-201ENST00000364935 107 ntBASIC2.52□□□□□ -2.01
NPIPA3F8WFD2 Y_RNA.318-201ENST00000365131 97 ntBASIC2.52□□□□□ -2.01
NPIPA3F8WFD2 RNU6-1103P-201ENST00000384150 107 ntBASIC2.52□□□□□ -2.01
NPIPA3F8WFD2 RNU6-606P-201ENST00000384721 111 ntBASIC2.52□□□□□ -2.01
NPIPA3F8WFD2 AL512633.1-201ENST00000399931 655 ntBASIC2.52□□□□□ -2.01
NPIPA3F8WFD2 AL591416.1-201ENST00000404015 867 ntBASIC2.52□□□□□ -2.01
NPIPA3F8WFD2 RNU4-55P-201ENST00000410731 137 ntBASIC2.52□□□□□ -2.01
NPIPA3F8WFD2 AC016831.2-201ENST00000417179 352 ntBASIC2.52□□□□□ -2.01
NPIPA3F8WFD2 MTCO3P30-201ENST00000426425 670 ntBASIC2.52□□□□□ -2.01
NPIPA3F8WFD2 AL596276.1-201ENST00000434465 418 ntBASIC2.52□□□□□ -2.01
NPIPA3F8WFD2 RPL39P40-201ENST00000445481 146 ntBASIC2.52□□□□□ -2.01
NPIPA3F8WFD2 AL360271.2-201ENST00000447710 161 ntBASIC2.52□□□□□ -2.01
NPIPA3F8WFD2 RPL23AP20-201ENST00000447965 421 ntBASIC2.52□□□□□ -2.01
NPIPA3F8WFD2 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
NPIPA3F8WFD2 AL109933.2-201ENST00000452651 260 ntBASIC2.52□□□□□ -2.01
NPIPA3F8WFD2 AC092436.1-201ENST00000506450 503 ntBASIC2.52□□□□□ -2.01
NPIPA3F8WFD2 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.52□□□□□ -2.01
NPIPA3F8WFD2 AC091133.4-201ENST00000511142 308 ntBASIC2.52□□□□□ -2.01
NPIPA3F8WFD2 SNORD19.2-201ENST00000516978 73 ntBASIC2.52□□□□□ -2.01
NPIPA3F8WFD2 AC026241.1-201ENST00000517873 2142 ntBASIC2.52□□□□□ -2.01
NPIPA3F8WFD2 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.52□□□□□ -2.01
NPIPA3F8WFD2 AC092325.1-201ENST00000566449 554 ntBASIC2.52□□□□□ -2.01
NPIPA3F8WFD2 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.52□□□□□ -2.01
NPIPA3F8WFD2 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.52□□□□□ -2.01
NPIPA3F8WFD2 MIR5692A1-201ENST00000580523 69 ntBASIC2.52□□□□□ -2.01
NPIPA3F8WFD2 ZNF861P-201ENST00000588126 639 ntBASIC2.52□□□□□ -2.01
NPIPA3F8WFD2 NRBF2P5-201ENST00000603087 788 ntBASIC2.52□□□□□ -2.01
NPIPA3F8WFD2 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
NPIPA3F8WFD2 AC011890.2-201ENST00000613393 294 ntBASIC2.52□□□□□ -2.01
NPIPA3F8WFD2 AP001486.3-201ENST00000615334 372 ntBASIC2.52□□□□□ -2.01
NPIPA3F8WFD2 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.52□□□□□ -2.01
NPIPA3F8WFD2 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
NPIPA3F8WFD2 CDC27P3-201ENST00000635418 1910 ntBASIC2.51□□□□□ -2.01
NPIPA3F8WFD2 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.51□□□□□ -2.01
NPIPA3F8WFD2 Y_RNA.381-201ENST00000365666 102 ntBASIC2.51□□□□□ -2.01
NPIPA3F8WFD2 MIR181A2-201ENST00000384863 110 ntBASIC2.51□□□□□ -2.01
NPIPA3F8WFD2 MIR518D-201ENST00000385014 87 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms