Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 MIR4713-201ENST00000582691 75 ntBASIC0.26□□□□□ -2.37
COL6A5A8TX70 AL162730.1-201ENST00000605734 292 ntBASIC0.26□□□□□ -2.37
COL6A5A8TX70 uc_338.17-201ENST00000619633 179 ntBASIC0.26□□□□□ -2.37
COL6A5A8TX70 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
COL6A5A8TX70 MTCO2P8-201ENST00000412213 658 ntBASIC0.25□□□□□ -2.37
COL6A5A8TX70 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC0.25□□□□□ -2.37
COL6A5A8TX70 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC0.25□□□□□ -2.37
COL6A5A8TX70 PIGFP2-201ENST00000421400 651 ntBASIC0.25□□□□□ -2.37
COL6A5A8TX70 MTND4LP11-201ENST00000422184 280 ntBASIC0.25□□□□□ -2.37
COL6A5A8TX70 UBE2D3P2-201ENST00000424409 445 ntBASIC0.25□□□□□ -2.37
COL6A5A8TX70 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.25□□□□□ -2.37
COL6A5A8TX70 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC0.25□□□□□ -2.37
COL6A5A8TX70 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.25□□□□□ -2.37
COL6A5A8TX70 AC104763.3-201ENST00000613765 618 ntBASIC0.25□□□□□ -2.37
COL6A5A8TX70 AL121890.5-201ENST00000620848 304 ntBASIC0.25□□□□□ -2.37
COL6A5A8TX70 AC006963.1-201ENST00000624003 1052 ntBASIC0.25□□□□□ -2.37
COL6A5A8TX70 RNU1-36P-201ENST00000365130 165 ntBASIC0.25□□□□□ -2.37
COL6A5A8TX70 AC009518.2-201ENST00000418056 731 ntBASIC0.25□□□□□ -2.37
COL6A5A8TX70 AC096920.1-201ENST00000423991 241 ntBASIC0.25□□□□□ -2.37
COL6A5A8TX70 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC0.25□□□□□ -2.37
COL6A5A8TX70 AC104108.1-201ENST00000509930 412 ntBASIC0.25□□□□□ -2.37
COL6A5A8TX70 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.25□□□□□ -2.37
COL6A5A8TX70 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.25□□□□□ -2.37
COL6A5A8TX70 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.25□□□□□ -2.37
COL6A5A8TX70 AL669831.4-202ENST00000590817 238 ntBASIC0.25□□□□□ -2.37
COL6A5A8TX70 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC0.25□□□□□ -2.37
COL6A5A8TX70 AC091925.2-201ENST00000625059 256 ntBASIC0.25□□□□□ -2.37
COL6A5A8TX70 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC0.25□□□□□ -2.37
COL6A5A8TX70 U3.13-201ENST00000364804 214 ntBASIC0.24□□□□□ -2.37
COL6A5A8TX70 MTATP6P23-201ENST00000440153 476 ntBASIC0.24□□□□□ -2.37
COL6A5A8TX70 AP004371.1-201ENST00000525240 214 ntBASIC0.24□□□□□ -2.37
COL6A5A8TX70 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC0.24□□□□□ -2.37
COL6A5A8TX70 MIR4768-201ENST00000585270 74 ntBASIC0.24□□□□□ -2.37
COL6A5A8TX70 AC021749.1-201ENST00000604322 607 ntBASIC0.24□□□□□ -2.37
COL6A5A8TX70 AC084824.5-201ENST00000612009 413 ntBASIC0.24□□□□□ -2.37
COL6A5A8TX70 AP002791.1-201ENST00000623291 381 ntBASIC0.24□□□□□ -2.37
COL6A5A8TX70 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.24□□□□□ -2.37
COL6A5A8TX70 SNORD114-28-201ENST00000363610 72 ntBASIC0.24□□□□□ -2.37
COL6A5A8TX70 RNU4-7P-201ENST00000364758 141 ntBASIC0.24□□□□□ -2.37
COL6A5A8TX70 RNU6-220P-201ENST00000390919 107 ntBASIC0.24□□□□□ -2.37
COL6A5A8TX70 AL117342.1-201ENST00000404861 406 ntBASIC0.24□□□□□ -2.37
COL6A5A8TX70 RNA5SP222-201ENST00000411039 105 ntBASIC0.24□□□□□ -2.37
COL6A5A8TX70 AC092047.1-201ENST00000424997 240 ntBASIC0.24□□□□□ -2.37
COL6A5A8TX70 AL035410.1-201ENST00000427409 427 ntBASIC0.24□□□□□ -2.37
COL6A5A8TX70 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
COL6A5A8TX70 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.24□□□□□ -2.37
COL6A5A8TX70 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.24□□□□□ -2.37
COL6A5A8TX70 AC022254.1-201ENST00000567857 235 ntBASIC0.24□□□□□ -2.37
COL6A5A8TX70 AC005668.1-201ENST00000571142 476 ntBASIC0.24□□□□□ -2.37
COL6A5A8TX70 AC079395.3-201ENST00000615161 484 ntBASIC0.24□□□□□ -2.37
COL6A5A8TX70 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC0.24□□□□□ -2.37
COL6A5A8TX70 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC0.24□□□□□ -2.37
COL6A5A8TX70 AL589655.1-201ENST00000405398 482 ntBASIC0.23□□□□□ -2.37
COL6A5A8TX70 RNU4-63P-201ENST00000411313 118 ntBASIC0.23□□□□□ -2.37
COL6A5A8TX70 USP9YP24-201ENST00000434374 697 ntBASIC0.23□□□□□ -2.37
COL6A5A8TX70 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.23□□□□□ -2.37
COL6A5A8TX70 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC0.23□□□□□ -2.37
COL6A5A8TX70 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.23□□□□□ -2.37
COL6A5A8TX70 AC136628.3-201ENST00000521868 290 ntBASIC0.23□□□□□ -2.37
COL6A5A8TX70 AP006587.4-201ENST00000526053 529 ntBASIC0.23□□□□□ -2.37
COL6A5A8TX70 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC0.23□□□□□ -2.37
COL6A5A8TX70 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC0.23□□□□□ -2.37
COL6A5A8TX70 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC0.23□□□□□ -2.37
COL6A5A8TX70 BNIP3P25-201ENST00000596023 559 ntBASIC0.23□□□□□ -2.37
COL6A5A8TX70 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC0.23□□□□□ -2.37
COL6A5A8TX70 CR848007.1-201ENST00000442354 1699 ntBASIC0.23□□□□□ -2.37
COL6A5A8TX70 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.23□□□□□ -2.37
COL6A5A8TX70 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.23□□□□□ -2.37
COL6A5A8TX70 AL355615.1-201ENST00000406187 641 ntBASIC0.23□□□□□ -2.37
COL6A5A8TX70 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.23□□□□□ -2.37
COL6A5A8TX70 RNA5SP461-201ENST00000516451 104 ntBASIC0.23□□□□□ -2.37
COL6A5A8TX70 MIR3681-201ENST00000580089 72 ntBASIC0.23□□□□□ -2.37
COL6A5A8TX70 BNIP3P16-201ENST00000589779 534 ntBASIC0.23□□□□□ -2.37
COL6A5A8TX70 AC018618.2-201ENST00000604770 446 ntBASIC0.23□□□□□ -2.37
COL6A5A8TX70 Z75746.1-201ENST00000440243 2080 ntBASIC0.23□□□□□ -2.37
COL6A5A8TX70 RNU6-674P-201ENST00000363831 107 ntBASIC0.22□□□□□ -2.37
COL6A5A8TX70 RNU6-1297P-201ENST00000384415 104 ntBASIC0.22□□□□□ -2.37
COL6A5A8TX70 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
COL6A5A8TX70 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC0.22□□□□□ -2.37
COL6A5A8TX70 AC098614.2-201ENST00000426040 255 ntBASIC0.22□□□□□ -2.37
COL6A5A8TX70 AC092634.2-201ENST00000428146 1010 ntBASIC0.22□□□□□ -2.37
COL6A5A8TX70 COX7A2P2-201ENST00000505291 250 ntBASIC0.22□□□□□ -2.37
COL6A5A8TX70 AP001269.3-201ENST00000588718 329 ntBASIC0.22□□□□□ -2.37
COL6A5A8TX70 RNU6-338P-201ENST00000383888 105 ntBASIC0.22□□□□□ -2.37
COL6A5A8TX70 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.22□□□□□ -2.37
COL6A5A8TX70 AL354941.1-201ENST00000438600 464 ntBASIC0.22□□□□□ -2.37
COL6A5A8TX70 HMGB1P22-201ENST00000505315 124 ntBASIC0.22□□□□□ -2.37
COL6A5A8TX70 AC004062.1-201ENST00000509926 645 ntBASIC0.22□□□□□ -2.37
COL6A5A8TX70 Y_RNA.674-201ENST00000516362 113 ntBASIC0.22□□□□□ -2.37
COL6A5A8TX70 OR5AK1P-201ENST00000524837 922 ntBASIC0.22□□□□□ -2.37
COL6A5A8TX70 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC0.22□□□□□ -2.37
COL6A5A8TX70 AC006518.2-201ENST00000542513 940 ntBASIC0.22□□□□□ -2.37
COL6A5A8TX70 AC087685.1-201ENST00000587507 141 ntBASIC0.22□□□□□ -2.37
COL6A5A8TX70 AC018638.7-201ENST00000605836 1114 ntBASIC0.22□□□□□ -2.37
COL6A5A8TX70 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC0.22□□□□□ -2.37
COL6A5A8TX70 AC025588.4-201ENST00000615802 908 ntBASIC0.22□□□□□ -2.37
COL6A5A8TX70 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC0.22□□□□□ -2.37
COL6A5A8TX70 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.22□□□□□ -2.37
COL6A5A8TX70 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC0.21□□□□□ -2.38
COL6A5A8TX70 SNORA8-201ENST00000384574 139 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms