Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 MIR524-201ENST00000385242 87 ntBASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 ELOCP30-201ENST00000447108 299 ntBASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 ARPC3P5-201ENST00000448802 534 ntBASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 AL031183.1-201ENST00000457667 207 ntBASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 RNA5SP310-201ENST00000459084 116 ntBASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 RPL7P18-201ENST00000478965 734 ntBASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 RPS23P4-201ENST00000487908 423 ntBASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 AC104685.1-201ENST00000502445 371 ntBASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 AC113155.1-201ENST00000511141 769 ntBASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 RNU6-1256P-201ENST00000516539 103 ntBASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 SNORA48.10-201ENST00000516965 160 ntBASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 AC095031.1-201ENST00000623685 672 ntBASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 PCMTD1P7-201ENST00000634506 357 ntBASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 AC018630.2-201ENST00000534866 2403 ntBASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 SNRPEP10-201ENST00000420249 274 ntBASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 UBE2D3P2-201ENST00000424409 445 ntBASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 AC098614.2-201ENST00000426040 255 ntBASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 UBE2FP3-201ENST00000436366 524 ntBASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 RNU7-26P-201ENST00000458980 63 ntBASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 MTND3P3-201ENST00000505004 126 ntBASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 RNU6-583P-201ENST00000516012 92 ntBASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 BTF3P12-201ENST00000519620 469 ntBASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 AC124947.2-202ENST00000552735 133 ntBASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 AP001429.1-201ENST00000602568 530 ntBASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 AL158042.1-201ENST00000605338 460 ntBASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 RNU4-5P-201ENST00000607255 135 ntBASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 AC090970.3-201ENST00000612566 866 ntBASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 uc_338.20-201ENST00000621563 178 ntBASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 RNU6-288P-201ENST00000363690 104 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 SNORA4.1-201ENST00000364263 144 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 RNU6-741P-201ENST00000383889 107 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 MIR122-201ENST00000385044 85 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 Y_RNA.578-201ENST00000390903 88 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 SUMO2P12-201ENST00000405924 140 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 TRAPPC2P4-201ENST00000421750 331 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 XKRYP1-201ENST00000423438 492 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 RAC1P6-201ENST00000423911 575 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 XKRYP2-201ENST00000432915 492 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 AL512286.1-201ENST00000439244 400 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 MTND5P14-201ENST00000441481 1267 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 SNORA3.4-201ENST00000515969 96 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 RNA5SP384-201ENST00000516615 116 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 RNU1-104P-201ENST00000517280 175 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 IMMP1LP2-201ENST00000552954 492 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 AC023824.2-201ENST00000566185 400 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 AC105245.1-201ENST00000581934 244 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 MTND3P19-201ENST00000603825 345 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 AC103810.8-201ENST00000607347 118 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 AC245297.2-201ENST00000610119 565 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 AC108706.1-201ENST00000611053 297 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 AC090132.2-201ENST00000615881 347 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 AC098657.3-201ENST00000620434 263 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 AC079416.3-201ENST00000624479 549 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 AL049641.1-201ENST00000441055 1948 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 Y_RNA.115-201ENST00000363272 98 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 RNU6-744P-201ENST00000365557 107 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 RNU6-1316P-201ENST00000384242 108 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 RNU6-198P-201ENST00000384258 104 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 MIR325-201ENST00000385260 98 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 MIR1285-1-201ENST00000408593 84 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 RNU6-575P-201ENST00000411326 105 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 IPO7P1-201ENST00000442031 636 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 snoU13.8-201ENST00000458890 104 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 AL135752.1-201ENST00000479477 471 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 AC026801.1-201ENST00000497178 464 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 AC105313.1-201ENST00000509121 353 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms