Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 Z69720.2-201ENST00000624755 279 ntBASIC-0.03□□□□□ -2.41
LINC01549A6NIU2 MIR337-201ENST00000362281 93 ntBASIC-0.04□□□□□ -2.42
LINC01549A6NIU2 RNU4-12P-201ENST00000365233 139 ntBASIC-0.04□□□□□ -2.42
LINC01549A6NIU2 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC-0.04□□□□□ -2.42
LINC01549A6NIU2 AC010099.3-201ENST00000423896 409 ntBASIC-0.04□□□□□ -2.42
LINC01549A6NIU2 MTND4LP10-201ENST00000435146 291 ntBASIC-0.04□□□□□ -2.42
LINC01549A6NIU2 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC-0.04□□□□□ -2.42
LINC01549A6NIU2 AC245102.2-201ENST00000448956 180 ntBASIC-0.04□□□□□ -2.42
LINC01549A6NIU2 TPRKBP1-201ENST00000456243 481 ntBASIC-0.04□□□□□ -2.42
LINC01549A6NIU2 AP1S2P1-201ENST00000457344 379 ntBASIC-0.04□□□□□ -2.42
LINC01549A6NIU2 AC108740.1-201ENST00000498629 225 ntBASIC-0.04□□□□□ -2.42
LINC01549A6NIU2 AC108729.3-201ENST00000513484 108 ntBASIC-0.04□□□□□ -2.42
LINC01549A6NIU2 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC-0.04□□□□□ -2.42
LINC01549A6NIU2 AC124293.1-201ENST00000530034 493 ntBASIC-0.04□□□□□ -2.42
LINC01549A6NIU2 AC092451.2-201ENST00000538746 658 ntBASIC-0.04□□□□□ -2.42
LINC01549A6NIU2 Z83818.1-201ENST00000603584 150 ntBASIC-0.04□□□□□ -2.42
LINC01549A6NIU2 AP000860.1-201ENST00000605250 559 ntBASIC-0.04□□□□□ -2.42
LINC01549A6NIU2 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC-0.04□□□□□ -2.42
LINC01549A6NIU2 OR4G1P-203ENST00000641984 1631 ntBASIC-0.05□□□□□ -2.42
LINC01549A6NIU2 AL391994.1-201ENST00000254724 282 ntBASIC-0.05□□□□□ -2.42
LINC01549A6NIU2 RNU5E-1-201ENST00000362477 120 ntBASIC-0.05□□□□□ -2.42
LINC01549A6NIU2 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC-0.05□□□□□ -2.42
LINC01549A6NIU2 HSPE1P9-201ENST00000440046 311 ntBASIC-0.05□□□□□ -2.42
LINC01549A6NIU2 TAF9P1-201ENST00000445421 515 ntBASIC-0.05□□□□□ -2.42
LINC01549A6NIU2 TAF9P2-201ENST00000454958 515 ntBASIC-0.05□□□□□ -2.42
LINC01549A6NIU2 RPL7P43-201ENST00000478876 753 ntBASIC-0.05□□□□□ -2.42
LINC01549A6NIU2 CYCSP27-201ENST00000527643 293 ntBASIC-0.05□□□□□ -2.42
LINC01549A6NIU2 MIR4524B-201ENST00000581569 115 ntBASIC-0.05□□□□□ -2.42
LINC01549A6NIU2 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC-0.05□□□□□ -2.42
LINC01549A6NIU2 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC-0.05□□□□□ -2.42
LINC01549A6NIU2 RAC1P9-201ENST00000604990 392 ntBASIC-0.05□□□□□ -2.42
LINC01549A6NIU2 AC092953.2-201ENST00000608000 699 ntBASIC-0.05□□□□□ -2.42
LINC01549A6NIU2 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC-0.05□□□□□ -2.42
LINC01549A6NIU2 MIR6788-201ENST00000618842 66 ntBASIC-0.05□□□□□ -2.42
LINC01549A6NIU2 ANKRD26P2-201ENST00000445530 1710 ntBASIC-0.05□□□□□ -2.42
LINC01549A6NIU2 MIR411-201ENST00000362239 96 ntBASIC-0.06□□□□□ -2.42
LINC01549A6NIU2 RNU1-58P-201ENST00000362413 163 ntBASIC-0.06□□□□□ -2.42
LINC01549A6NIU2 Y_RNA.476-201ENST00000384347 108 ntBASIC-0.06□□□□□ -2.42
LINC01549A6NIU2 MIR200A-201ENST00000384875 90 ntBASIC-0.06□□□□□ -2.42
LINC01549A6NIU2 RNU6-882P-201ENST00000391025 103 ntBASIC-0.06□□□□□ -2.42
LINC01549A6NIU2 HMGB1P17-201ENST00000403495 628 ntBASIC-0.06□□□□□ -2.42
LINC01549A6NIU2 Y_RNA.595-201ENST00000410403 105 ntBASIC-0.06□□□□□ -2.42
LINC01549A6NIU2 RNU2-7P-201ENST00000410794 178 ntBASIC-0.06□□□□□ -2.42
LINC01549A6NIU2 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC-0.06□□□□□ -2.42
LINC01549A6NIU2 AL590556.1-201ENST00000423231 483 ntBASIC-0.06□□□□□ -2.42
LINC01549A6NIU2 AC092423.1-201ENST00000430165 186 ntBASIC-0.06□□□□□ -2.42
LINC01549A6NIU2 NANOGP2-201ENST00000435391 727 ntBASIC-0.06□□□□□ -2.42
LINC01549A6NIU2 AL353718.1-201ENST00000451028 517 ntBASIC-0.06□□□□□ -2.42
LINC01549A6NIU2 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC-0.06□□□□□ -2.42
LINC01549A6NIU2 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
LINC01549A6NIU2 RPS26P45-201ENST00000471748 340 ntBASIC-0.06□□□□□ -2.42
LINC01549A6NIU2 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC-0.06□□□□□ -2.42
LINC01549A6NIU2 SMURF2P1-201ENST00000514992 481 ntBASIC-0.06□□□□□ -2.42
LINC01549A6NIU2 RN7SKP88-201ENST00000516847 250 ntBASIC-0.06□□□□□ -2.42
LINC01549A6NIU2 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC-0.06□□□□□ -2.42
LINC01549A6NIU2 MIR4667-201ENST00000578933 66 ntBASIC-0.06□□□□□ -2.42
LINC01549A6NIU2 KATNBL1P5-201ENST00000605015 517 ntBASIC-0.06□□□□□ -2.42
LINC01549A6NIU2 7SK.8-201ENST00000612110 250 ntBASIC-0.06□□□□□ -2.42
LINC01549A6NIU2 AC090970.3-201ENST00000612566 866 ntBASIC-0.06□□□□□ -2.42
LINC01549A6NIU2 7SK.11-201ENST00000615477 250 ntBASIC-0.06□□□□□ -2.42
LINC01549A6NIU2 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC-0.06□□□□□ -2.42
LINC01549A6NIU2 7SK.13-201ENST00000622040 250 ntBASIC-0.06□□□□□ -2.42
LINC01549A6NIU2 AL138713.1-201ENST00000624026 2130 ntBASIC-0.06□□□□□ -2.42
LINC01549A6NIU2 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
LINC01549A6NIU2 U3.9-201ENST00000363823 204 ntBASIC-0.07□□□□□ -2.42
LINC01549A6NIU2 RNU6-1327P-201ENST00000365302 105 ntBASIC-0.07□□□□□ -2.42
LINC01549A6NIU2 RNU6-730P-201ENST00000383954 104 ntBASIC-0.07□□□□□ -2.42
LINC01549A6NIU2 MTCO1P56-201ENST00000401674 224 ntBASIC-0.07□□□□□ -2.42
LINC01549A6NIU2 AL591034.2-201ENST00000402839 359 ntBASIC-0.07□□□□□ -2.42
LINC01549A6NIU2 RPS20P10-201ENST00000451209 253 ntBASIC-0.07□□□□□ -2.42
LINC01549A6NIU2 OR2AQ1P-201ENST00000451972 200 ntBASIC-0.07□□□□□ -2.42
LINC01549A6NIU2 RPL26P26-201ENST00000480251 434 ntBASIC-0.07□□□□□ -2.42
LINC01549A6NIU2 BOLA3P3-201ENST00000505182 232 ntBASIC-0.07□□□□□ -2.42
LINC01549A6NIU2 AC103833.1-201ENST00000517442 172 ntBASIC-0.07□□□□□ -2.42
LINC01549A6NIU2 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC-0.07□□□□□ -2.42
LINC01549A6NIU2 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC-0.07□□□□□ -2.42
LINC01549A6NIU2 ELOCP5-201ENST00000604924 333 ntBASIC-0.07□□□□□ -2.42
LINC01549A6NIU2 AL353765.1-201ENST00000605514 183 ntBASIC-0.07□□□□□ -2.42
LINC01549A6NIU2 AL022345.1-201ENST00000607292 135 ntBASIC-0.07□□□□□ -2.42
LINC01549A6NIU2 AC040168.1-201ENST00000623594 991 ntBASIC-0.07□□□□□ -2.42
LINC01549A6NIU2 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC-0.07□□□□□ -2.42
LINC01549A6NIU2 SNORD44.1-201ENST00000363202 61 ntBASIC-0.08□□□□□ -2.42
LINC01549A6NIU2 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC-0.08□□□□□ -2.42
LINC01549A6NIU2 RNU6-1237P-201ENST00000384777 107 ntBASIC-0.08□□□□□ -2.42
LINC01549A6NIU2 MIR32-201ENST00000384965 70 ntBASIC-0.08□□□□□ -2.42
LINC01549A6NIU2 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC-0.08□□□□□ -2.42
LINC01549A6NIU2 AC104651.1-201ENST00000427559 735 ntBASIC-0.08□□□□□ -2.42
LINC01549A6NIU2 AC012497.1-201ENST00000429392 575 ntBASIC-0.08□□□□□ -2.42
LINC01549A6NIU2 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC-0.08□□□□□ -2.42
LINC01549A6NIU2 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC-0.08□□□□□ -2.42
LINC01549A6NIU2 AC084024.2-201ENST00000503480 791 ntBASIC-0.08□□□□□ -2.42
LINC01549A6NIU2 RN7SKP12-201ENST00000516275 143 ntBASIC-0.08□□□□□ -2.42
LINC01549A6NIU2 RNVU1-2-201ENST00000516326 135 ntBASIC-0.08□□□□□ -2.42
LINC01549A6NIU2 RNA5SP168-201ENST00000516642 112 ntBASIC-0.08□□□□□ -2.42
LINC01549A6NIU2 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC-0.08□□□□□ -2.42
LINC01549A6NIU2 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC-0.08□□□□□ -2.42
LINC01549A6NIU2 AC090330.1-201ENST00000588646 764 ntBASIC-0.08□□□□□ -2.42
LINC01549A6NIU2 AL161729.4-201ENST00000604650 476 ntBASIC-0.08□□□□□ -2.42
LINC01549A6NIU2 MIR924-201ENST00000638017 53 ntBASIC-0.08□□□□□ -2.42
LINC01549A6NIU2 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC-0.09□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 192.1 ms