Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 RNU6-338P-201ENST00000383888 105 ntBASIC1.03□□□□□ -2.24
TRAV1-1A0A0B4J248 RNU6-203P-201ENST00000384038 104 ntBASIC1.03□□□□□ -2.24
TRAV1-1A0A0B4J248 MIR29C-201ENST00000385231 88 ntBASIC1.03□□□□□ -2.24
TRAV1-1A0A0B4J248 TIMM9P2-201ENST00000419324 266 ntBASIC1.03□□□□□ -2.24
TRAV1-1A0A0B4J248 UBE2V1P4-201ENST00000425374 344 ntBASIC1.03□□□□□ -2.24
TRAV1-1A0A0B4J248 AL513185.2-201ENST00000425543 193 ntBASIC1.03□□□□□ -2.24
TRAV1-1A0A0B4J248 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.03□□□□□ -2.24
TRAV1-1A0A0B4J248 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.03□□□□□ -2.24
TRAV1-1A0A0B4J248 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC1.03□□□□□ -2.24
TRAV1-1A0A0B4J248 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.03□□□□□ -2.24
TRAV1-1A0A0B4J248 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC1.03□□□□□ -2.24
TRAV1-1A0A0B4J248 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.03□□□□□ -2.24
TRAV1-1A0A0B4J248 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.03□□□□□ -2.24
TRAV1-1A0A0B4J248 RPF2P2-201ENST00000504693 896 ntBASIC1.03□□□□□ -2.24
TRAV1-1A0A0B4J248 FAM92A1P2-202ENST00000504766 877 ntBASIC1.03□□□□□ -2.24
TRAV1-1A0A0B4J248 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.03□□□□□ -2.24
TRAV1-1A0A0B4J248 RNY4P37-201ENST00000516225 96 ntBASIC1.03□□□□□ -2.24
TRAV1-1A0A0B4J248 SNORA44.1-201ENST00000517031 108 ntBASIC1.03□□□□□ -2.24
TRAV1-1A0A0B4J248 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.03□□□□□ -2.24
TRAV1-1A0A0B4J248 AC126365.2-201ENST00000580630 379 ntBASIC1.03□□□□□ -2.24
TRAV1-1A0A0B4J248 AC009977.1-201ENST00000586015 570 ntBASIC1.03□□□□□ -2.24
TRAV1-1A0A0B4J248 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.03□□□□□ -2.24
TRAV1-1A0A0B4J248 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC1.03□□□□□ -2.24
TRAV1-1A0A0B4J248 AC005776.1-201ENST00000603164 290 ntBASIC1.03□□□□□ -2.24
TRAV1-1A0A0B4J248 AC010900.2-201ENST00000604508 210 ntBASIC1.03□□□□□ -2.24
TRAV1-1A0A0B4J248 AC018638.7-201ENST00000605836 1114 ntBASIC1.03□□□□□ -2.24
TRAV1-1A0A0B4J248 MIR8081-201ENST00000611533 95 ntBASIC1.03□□□□□ -2.24
TRAV1-1A0A0B4J248 AL354696.1-201ENST00000614652 497 ntBASIC1.03□□□□□ -2.24
TRAV1-1A0A0B4J248 AP000676.3-201ENST00000623299 569 ntBASIC1.03□□□□□ -2.24
TRAV1-1A0A0B4J248 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.03□□□□□ -2.24
TRAV1-1A0A0B4J248 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.03□□□□□ -2.24
TRAV1-1A0A0B4J248 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 RNU1-57P-201ENST00000384491 166 ntBASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 SNORA67.6-201ENST00000391093 99 ntBASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 AL627390.1-201ENST00000396055 340 ntBASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 HMGB1P31-201ENST00000437242 427 ntBASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 AC005094.1-201ENST00000440420 368 ntBASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 TEX21P-201ENST00000447107 1476 ntBASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 HMGN2P23-201ENST00000456759 269 ntBASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 AC024589.1-201ENST00000512207 263 ntBASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 AC021451.1-201ENST00000523498 1129 ntBASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 AC005832.3-201ENST00000537929 631 ntBASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 IMMP1LP2-201ENST00000552954 492 ntBASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 AC136619.2-201ENST00000563361 631 ntBASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 MIR3683-201ENST00000580847 82 ntBASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 AC025811.1-201ENST00000604312 472 ntBASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 AL670379.10-201ENST00000604330 253 ntBASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 DDX43P2-201ENST00000604753 1354 ntBASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 AL670379.9-201ENST00000605428 253 ntBASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 PRR13P7-201ENST00000605538 430 ntBASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 AC107952.2-201ENST00000606048 486 ntBASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 AC021755.4-201ENST00000616620 456 ntBASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 AC017037.3-201ENST00000625016 472 ntBASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.02□□□□□ -2.25
TRAV1-1A0A0B4J248 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 AC138393.1-203ENST00000327086 343 ntBASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 RNU5E-1-201ENST00000362477 120 ntBASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 RNA5SP432-201ENST00000362480 116 ntBASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 RNU4-13P-201ENST00000364019 141 ntBASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 RNA5SP99-201ENST00000364020 114 ntBASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 RNU6-14P-201ENST00000384630 106 ntBASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 MIR764-201ENST00000390811 85 ntBASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 AL603865.2-201ENST00000401679 213 ntBASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 USP9YP21-201ENST00000420603 432 ntBASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 AC008267.5-201ENST00000424928 265 ntBASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 AC104651.1-201ENST00000427559 735 ntBASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 BTBD7P2-201ENST00000441962 620 ntBASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 ELOCP30-201ENST00000447108 299 ntBASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 RPS29P29-201ENST00000456396 171 ntBASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 RPL31P58-201ENST00000469001 379 ntBASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 AC023194.1-201ENST00000493084 308 ntBASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 MTCYBP18-201ENST00000501056 747 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms