Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
USH1CQ9Y6N9 AC079395.1-201ENST00000510981 262 ntBASIC1.62□□□□□ -2.15
USH1CQ9Y6N9 AC109445.1-201ENST00000512356 383 ntBASIC1.62□□□□□ -2.15
USH1CQ9Y6N9 RNU6-295P-201ENST00000516901 104 ntBASIC1.62□□□□□ -2.15
USH1CQ9Y6N9 AP005639.2-201ENST00000527592 928 ntBASIC1.62□□□□□ -2.15
USH1CQ9Y6N9 AC084851.1-201ENST00000529105 249 ntBASIC1.62□□□□□ -2.15
USH1CQ9Y6N9 LINC00933-203ENST00000559812 219 ntBASIC1.62□□□□□ -2.15
USH1CQ9Y6N9 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.62□□□□□ -2.15
USH1CQ9Y6N9 MIR4782-201ENST00000577987 79 ntBASIC1.62□□□□□ -2.15
USH1CQ9Y6N9 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.62□□□□□ -2.15
USH1CQ9Y6N9 BNIP3P27-201ENST00000599991 412 ntBASIC1.62□□□□□ -2.15
USH1CQ9Y6N9 AC103710.2-201ENST00000609912 942 ntBASIC1.62□□□□□ -2.15
USH1CQ9Y6N9 uc_338.5-201ENST00000611839 155 ntBASIC1.62□□□□□ -2.15
USH1CQ9Y6N9 AC138627.2-201ENST00000624202 601 ntBASIC1.62□□□□□ -2.15
USH1CQ9Y6N9 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC1.62□□□□□ -2.15
USH1CQ9Y6N9 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
USH1CQ9Y6N9 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
USH1CQ9Y6N9 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.61□□□□□ -2.15
USH1CQ9Y6N9 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.61□□□□□ -2.15
USH1CQ9Y6N9 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
USH1CQ9Y6N9 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
USH1CQ9Y6N9 Z98749.2-208ENST00000381646 500 ntBASIC1.61□□□□□ -2.15
USH1CQ9Y6N9 MIR583-201ENST00000384846 75 ntBASIC1.61□□□□□ -2.15
USH1CQ9Y6N9 MIR764-201ENST00000390811 85 ntBASIC1.61□□□□□ -2.15
USH1CQ9Y6N9 SNORA26.9-201ENST00000391322 122 ntBASIC1.61□□□□□ -2.15
USH1CQ9Y6N9 RNU6-955P-201ENST00000410497 104 ntBASIC1.61□□□□□ -2.15
USH1CQ9Y6N9 AL158823.1-201ENST00000418441 478 ntBASIC1.61□□□□□ -2.15
USH1CQ9Y6N9 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.61□□□□□ -2.15
USH1CQ9Y6N9 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.61□□□□□ -2.15
USH1CQ9Y6N9 HSPE1P21-201ENST00000438283 308 ntBASIC1.61□□□□□ -2.15
USH1CQ9Y6N9 BRK1P2-201ENST00000442875 223 ntBASIC1.61□□□□□ -2.15
USH1CQ9Y6N9 MTND6P13-201ENST00000443510 523 ntBASIC1.61□□□□□ -2.15
USH1CQ9Y6N9 AC007327.1-201ENST00000447461 264 ntBASIC1.61□□□□□ -2.15
USH1CQ9Y6N9 AC117503.1-201ENST00000472241 394 ntBASIC1.61□□□□□ -2.15
USH1CQ9Y6N9 AC104685.1-201ENST00000502445 371 ntBASIC1.61□□□□□ -2.15
USH1CQ9Y6N9 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
USH1CQ9Y6N9 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.61□□□□□ -2.15
USH1CQ9Y6N9 RNA5SP182-201ENST00000516064 82 ntBASIC1.61□□□□□ -2.15
USH1CQ9Y6N9 RNU6-678P-201ENST00000516832 109 ntBASIC1.61□□□□□ -2.15
USH1CQ9Y6N9 AL354943.1-201ENST00000572103 781 ntBASIC1.61□□□□□ -2.15
USH1CQ9Y6N9 MIR4293-201ENST00000584305 78 ntBASIC1.61□□□□□ -2.15
USH1CQ9Y6N9 AL713866.2-201ENST00000603579 219 ntBASIC1.61□□□□□ -2.15
USH1CQ9Y6N9 AC106052.1-201ENST00000608029 497 ntBASIC1.61□□□□□ -2.15
USH1CQ9Y6N9 AC090970.3-201ENST00000612566 866 ntBASIC1.61□□□□□ -2.15
USH1CQ9Y6N9 AL773524.1-201ENST00000614065 229 ntBASIC1.61□□□□□ -2.15
USH1CQ9Y6N9 AC107308.1-201ENST00000615897 301 ntBASIC1.61□□□□□ -2.15
USH1CQ9Y6N9 AC013470.4-201ENST00000619978 986 ntBASIC1.61□□□□□ -2.15
USH1CQ9Y6N9 AC017037.3-201ENST00000625016 472 ntBASIC1.61□□□□□ -2.15
USH1CQ9Y6N9 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.61□□□□□ -2.15
USH1CQ9Y6N9 ZNF72P-201ENST00000425869 1908 ntBASIC1.61□□□□□ -2.15
USH1CQ9Y6N9 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
USH1CQ9Y6N9 RNU6-898P-201ENST00000365627 104 ntBASIC1.6□□□□□ -2.15
USH1CQ9Y6N9 MIR95-201ENST00000385072 81 ntBASIC1.6□□□□□ -2.15
USH1CQ9Y6N9 U8.13-201ENST00000390842 128 ntBASIC1.6□□□□□ -2.15
USH1CQ9Y6N9 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
USH1CQ9Y6N9 AC119751.3-201ENST00000399720 670 ntBASIC1.6□□□□□ -2.15
USH1CQ9Y6N9 AL591034.2-201ENST00000402839 359 ntBASIC1.6□□□□□ -2.15
USH1CQ9Y6N9 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.6□□□□□ -2.15
USH1CQ9Y6N9 AC083875.1-201ENST00000419509 405 ntBASIC1.6□□□□□ -2.15
USH1CQ9Y6N9 AL592045.1-201ENST00000429867 352 ntBASIC1.6□□□□□ -2.15
USH1CQ9Y6N9 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.6□□□□□ -2.15
USH1CQ9Y6N9 RSU1P2-202ENST00000437884 485 ntBASIC1.6□□□□□ -2.15
USH1CQ9Y6N9 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.6□□□□□ -2.15
USH1CQ9Y6N9 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.6□□□□□ -2.15
USH1CQ9Y6N9 AC023194.1-201ENST00000493084 308 ntBASIC1.6□□□□□ -2.15
USH1CQ9Y6N9 AC104629.1-201ENST00000494226 508 ntBASIC1.6□□□□□ -2.15
USH1CQ9Y6N9 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.6□□□□□ -2.15
USH1CQ9Y6N9 AC021146.8-201ENST00000507455 733 ntBASIC1.6□□□□□ -2.15
USH1CQ9Y6N9 AC117522.2-201ENST00000510049 657 ntBASIC1.6□□□□□ -2.15
USH1CQ9Y6N9 RNU6-276P-201ENST00000516114 96 ntBASIC1.6□□□□□ -2.15
USH1CQ9Y6N9 SNORA19.3-201ENST00000516165 130 ntBASIC1.6□□□□□ -2.15
USH1CQ9Y6N9 RNU6-143P-201ENST00000516942 93 ntBASIC1.6□□□□□ -2.15
USH1CQ9Y6N9 SNORA48.11-201ENST00000517015 89 ntBASIC1.6□□□□□ -2.15
USH1CQ9Y6N9 PSMA3P-201ENST00000555485 635 ntBASIC1.6□□□□□ -2.15
USH1CQ9Y6N9 DUXAP1-201ENST00000556632 463 ntBASIC1.6□□□□□ -2.15
USH1CQ9Y6N9 AC009712.1-201ENST00000564938 316 ntBASIC1.6□□□□□ -2.15
USH1CQ9Y6N9 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.6□□□□□ -2.15
USH1CQ9Y6N9 AC025811.1-201ENST00000604312 472 ntBASIC1.6□□□□□ -2.15
USH1CQ9Y6N9 AC126118.1-201ENST00000607744 628 ntBASIC1.6□□□□□ -2.15
USH1CQ9Y6N9 AC092953.2-201ENST00000608000 699 ntBASIC1.6□□□□□ -2.15
USH1CQ9Y6N9 AL353997.5-201ENST00000618886 171 ntBASIC1.6□□□□□ -2.15
USH1CQ9Y6N9 AC092125.1-201ENST00000562568 1995 ntBASIC1.59□□□□□ -2.15
USH1CQ9Y6N9 AP000776.1-201ENST00000530032 1663 ntBASIC1.59□□□□□ -2.15
USH1CQ9Y6N9 RNU6-1284P-201ENST00000363701 100 ntBASIC1.59□□□□□ -2.15
USH1CQ9Y6N9 RNU6-701P-201ENST00000384059 107 ntBASIC1.59□□□□□ -2.15
USH1CQ9Y6N9 MIR518A2-201ENST00000384966 87 ntBASIC1.59□□□□□ -2.15
USH1CQ9Y6N9 RNU6-278P-201ENST00000390945 109 ntBASIC1.59□□□□□ -2.15
USH1CQ9Y6N9 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.59□□□□□ -2.15
USH1CQ9Y6N9 AC007098.1-201ENST00000420122 367 ntBASIC1.59□□□□□ -2.15
USH1CQ9Y6N9 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.59□□□□□ -2.15
USH1CQ9Y6N9 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.59□□□□□ -2.15
USH1CQ9Y6N9 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.59□□□□□ -2.15
USH1CQ9Y6N9 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.59□□□□□ -2.15
USH1CQ9Y6N9 MTND4P25-201ENST00000441039 533 ntBASIC1.59□□□□□ -2.15
USH1CQ9Y6N9 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.59□□□□□ -2.15
USH1CQ9Y6N9 AC007677.1-201ENST00000445757 515 ntBASIC1.59□□□□□ -2.15
USH1CQ9Y6N9 AC104058.1-201ENST00000448028 297 ntBASIC1.59□□□□□ -2.15
USH1CQ9Y6N9 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
USH1CQ9Y6N9 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.59□□□□□ -2.15
USH1CQ9Y6N9 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 179.3 ms