Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
CLDN16Q9Y5I7 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN16Q9Y5I7 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CLDN16Q9Y5I7 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
CLDN16Q9Y5I7 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
CLDN16Q9Y5I7 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CLDN16Q9Y5I7 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLDN16Q9Y5I7 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLDN16Q9Y5I7 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
CLDN16Q9Y5I7 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CLDN16Q9Y5I7 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CLDN16Q9Y5I7 Y_RNA.72-201ENST00000362894 103 ntBASIC3.09□□□□□ -1.91
CLDN16Q9Y5I7 Y_RNA.100-201ENST00000363141 102 ntBASIC3.09□□□□□ -1.91
CLDN16Q9Y5I7 RNU1-105P-201ENST00000363470 161 ntBASIC3.09□□□□□ -1.91
CLDN16Q9Y5I7 RNA5SP72-201ENST00000364442 117 ntBASIC3.09□□□□□ -1.91
CLDN16Q9Y5I7 Y_RNA.303-201ENST00000364998 94 ntBASIC3.09□□□□□ -1.91
CLDN16Q9Y5I7 RNU1-73P-201ENST00000383971 164 ntBASIC3.09□□□□□ -1.91
CLDN16Q9Y5I7 AL357075.1-201ENST00000404107 726 ntBASIC3.09□□□□□ -1.91
CLDN16Q9Y5I7 RNA5SP120-201ENST00000410900 112 ntBASIC3.09□□□□□ -1.91
CLDN16Q9Y5I7 RNU6-55P-201ENST00000411092 107 ntBASIC3.09□□□□□ -1.91
CLDN16Q9Y5I7 RNU6-954P-201ENST00000411355 107 ntBASIC3.09□□□□□ -1.91
CLDN16Q9Y5I7 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.09□□□□□ -1.91
CLDN16Q9Y5I7 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.09□□□□□ -1.91
CLDN16Q9Y5I7 AC098614.2-201ENST00000426040 255 ntBASIC3.09□□□□□ -1.91
CLDN16Q9Y5I7 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.09□□□□□ -1.91
CLDN16Q9Y5I7 RPL7P12-201ENST00000446719 750 ntBASIC3.09□□□□□ -1.91
CLDN16Q9Y5I7 snoU13.22-201ENST00000459428 104 ntBASIC3.09□□□□□ -1.91
CLDN16Q9Y5I7 RN7SL601P-201ENST00000471221 293 ntBASIC3.09□□□□□ -1.91
CLDN16Q9Y5I7 RPL7P49-201ENST00000471402 708 ntBASIC3.09□□□□□ -1.91
CLDN16Q9Y5I7 Y_RNA.665-201ENST00000516177 98 ntBASIC3.09□□□□□ -1.91
CLDN16Q9Y5I7 MIR892C-201ENST00000516410 77 ntBASIC3.09□□□□□ -1.91
CLDN16Q9Y5I7 SNORA20.3-201ENST00000516880 132 ntBASIC3.09□□□□□ -1.91
CLDN16Q9Y5I7 AC107934.2-201ENST00000518653 310 ntBASIC3.09□□□□□ -1.91
CLDN16Q9Y5I7 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.09□□□□□ -1.91
CLDN16Q9Y5I7 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.09□□□□□ -1.91
CLDN16Q9Y5I7 MIR3941-201ENST00000582572 103 ntBASIC3.09□□□□□ -1.91
CLDN16Q9Y5I7 AC007938.3-201ENST00000604965 623 ntBASIC3.09□□□□□ -1.91
CLDN16Q9Y5I7 AC007179.3-201ENST00000604976 235 ntBASIC3.09□□□□□ -1.91
CLDN16Q9Y5I7 YPEL5P2-201ENST00000605553 359 ntBASIC3.09□□□□□ -1.91
CLDN16Q9Y5I7 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.09□□□□□ -1.91
CLDN16Q9Y5I7 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.09□□□□□ -1.91
CLDN16Q9Y5I7 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.09□□□□□ -1.91
CLDN16Q9Y5I7 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
CLDN16Q9Y5I7 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN16Q9Y5I7 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN16Q9Y5I7 CBX3P1-201ENST00000325243 554 ntBASIC3.08□□□□□ -1.92
CLDN16Q9Y5I7 RNU6-522P-201ENST00000364497 107 ntBASIC3.08□□□□□ -1.92
CLDN16Q9Y5I7 SNORA75B-201ENST00000384053 137 ntBASIC3.08□□□□□ -1.92
CLDN16Q9Y5I7 RNU6-198P-201ENST00000384258 104 ntBASIC3.08□□□□□ -1.92
CLDN16Q9Y5I7 Y_RNA.480-201ENST00000384364 102 ntBASIC3.08□□□□□ -1.92
CLDN16Q9Y5I7 RPL5P18-201ENST00000406671 891 ntBASIC3.08□□□□□ -1.92
CLDN16Q9Y5I7 Y_RNA.623-201ENST00000411128 95 ntBASIC3.08□□□□□ -1.92
CLDN16Q9Y5I7 RPL26P27-201ENST00000414397 437 ntBASIC3.08□□□□□ -1.92
CLDN16Q9Y5I7 AL353621.1-201ENST00000418219 243 ntBASIC3.08□□□□□ -1.92
CLDN16Q9Y5I7 RPL35AP12-201ENST00000425362 338 ntBASIC3.08□□□□□ -1.92
CLDN16Q9Y5I7 AC098614.3-201ENST00000438957 440 ntBASIC3.08□□□□□ -1.92
CLDN16Q9Y5I7 PMCHL2-203ENST00000457791 237 ntBASIC3.08□□□□□ -1.92
CLDN16Q9Y5I7 RPL23AP67-201ENST00000465341 474 ntBASIC3.08□□□□□ -1.92
CLDN16Q9Y5I7 AC128713.1-201ENST00000471495 306 ntBASIC3.08□□□□□ -1.92
CLDN16Q9Y5I7 RPS29P20-201ENST00000489592 171 ntBASIC3.08□□□□□ -1.92
CLDN16Q9Y5I7 AC079140.5-201ENST00000507882 310 ntBASIC3.08□□□□□ -1.92
CLDN16Q9Y5I7 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN16Q9Y5I7 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.08□□□□□ -1.92
CLDN16Q9Y5I7 RNU6-1314P-201ENST00000517139 104 ntBASIC3.08□□□□□ -1.92
CLDN16Q9Y5I7 SNORA31.21-201ENST00000517180 77 ntBASIC3.08□□□□□ -1.92
CLDN16Q9Y5I7 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN16Q9Y5I7 AC011611.1-201ENST00000552179 197 ntBASIC3.08□□□□□ -1.92
CLDN16Q9Y5I7 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN16Q9Y5I7 AC074050.1-201ENST00000563247 211 ntBASIC3.08□□□□□ -1.92
CLDN16Q9Y5I7 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.08□□□□□ -1.92
CLDN16Q9Y5I7 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.08□□□□□ -1.92
CLDN16Q9Y5I7 AC002044.1-201ENST00000606707 158 ntBASIC3.08□□□□□ -1.92
CLDN16Q9Y5I7 AL121757.2-201ENST00000611223 313 ntBASIC3.08□□□□□ -1.92
CLDN16Q9Y5I7 AC103705.1-201ENST00000619013 241 ntBASIC3.08□□□□□ -1.92
CLDN16Q9Y5I7 AL008636.1-201ENST00000625038 1018 ntBASIC3.08□□□□□ -1.92
CLDN16Q9Y5I7 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CLDN16Q9Y5I7 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN16Q9Y5I7 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.08□□□□□ -1.92
CLDN16Q9Y5I7 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.08□□□□□ -1.92
CLDN16Q9Y5I7 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN16Q9Y5I7 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.08□□□□□ -1.92
CLDN16Q9Y5I7 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.08□□□□□ -1.92
CLDN16Q9Y5I7 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.08□□□□□ -1.92
CLDN16Q9Y5I7 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN16Q9Y5I7 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CLDN16Q9Y5I7 MTND5P7-201ENST00000413558 1798 ntBASIC3.07□□□□□ -1.92
CLDN16Q9Y5I7 RNU6-1252P-201ENST00000363054 104 ntBASIC3.07□□□□□ -1.92
CLDN16Q9Y5I7 RNU6-778P-201ENST00000363269 103 ntBASIC3.07□□□□□ -1.92
CLDN16Q9Y5I7 SNORD46.1-201ENST00000364139 104 ntBASIC3.07□□□□□ -1.92
CLDN16Q9Y5I7 RNU6-767P-201ENST00000384132 107 ntBASIC3.07□□□□□ -1.92
CLDN16Q9Y5I7 MIR10A-201ENST00000385043 110 ntBASIC3.07□□□□□ -1.92
CLDN16Q9Y5I7 MIR34A-201ENST00000385130 110 ntBASIC3.07□□□□□ -1.92
CLDN16Q9Y5I7 SNORA40C-201ENST00000391285 128 ntBASIC3.07□□□□□ -1.92
CLDN16Q9Y5I7 EIF4E2P1-201ENST00000393781 255 ntBASIC3.07□□□□□ -1.92
CLDN16Q9Y5I7 RNU6-607P-201ENST00000411283 108 ntBASIC3.07□□□□□ -1.92
CLDN16Q9Y5I7 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.07□□□□□ -1.92
CLDN16Q9Y5I7 RPLP0P7-201ENST00000416050 667 ntBASIC3.07□□□□□ -1.92
CLDN16Q9Y5I7 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.07□□□□□ -1.92
CLDN16Q9Y5I7 PGBD4P6-201ENST00000421501 610 ntBASIC3.07□□□□□ -1.92
CLDN16Q9Y5I7 AL627311.1-201ENST00000431514 115 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms