Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.7□□□□□ -1.82
PCDHGA3Q9Y5H0 AC110491.1-201ENST00000562191 2010 ntBASIC3.7□□□□□ -1.82
PCDHGA3Q9Y5H0 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PCDHGA3Q9Y5H0 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PCDHGA3Q9Y5H0 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
PCDHGA3Q9Y5H0 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PCDHGA3Q9Y5H0 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PCDHGA3Q9Y5H0 Y_RNA.474-201ENST00000384341 102 ntBASIC3.69□□□□□ -1.82
PCDHGA3Q9Y5H0 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.69□□□□□ -1.82
PCDHGA3Q9Y5H0 RPS20P15-201ENST00000412792 311 ntBASIC3.69□□□□□ -1.82
PCDHGA3Q9Y5H0 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.69□□□□□ -1.82
PCDHGA3Q9Y5H0 ATG3P1-201ENST00000419507 911 ntBASIC3.69□□□□□ -1.82
PCDHGA3Q9Y5H0 FABP5P14-201ENST00000437273 393 ntBASIC3.69□□□□□ -1.82
PCDHGA3Q9Y5H0 HIGD1AP2-201ENST00000446367 280 ntBASIC3.69□□□□□ -1.82
PCDHGA3Q9Y5H0 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.69□□□□□ -1.82
PCDHGA3Q9Y5H0 RNU7-23P-201ENST00000459465 62 ntBASIC3.69□□□□□ -1.82
PCDHGA3Q9Y5H0 RPL23AP62-201ENST00000463396 453 ntBASIC3.69□□□□□ -1.82
PCDHGA3Q9Y5H0 AC130509.1-201ENST00000464158 433 ntBASIC3.69□□□□□ -1.82
PCDHGA3Q9Y5H0 MTND5P5-201ENST00000503764 376 ntBASIC3.69□□□□□ -1.82
PCDHGA3Q9Y5H0 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.69□□□□□ -1.82
PCDHGA3Q9Y5H0 RNU6-277P-201ENST00000516272 106 ntBASIC3.69□□□□□ -1.82
PCDHGA3Q9Y5H0 AP004607.1-201ENST00000524456 203 ntBASIC3.69□□□□□ -1.82
PCDHGA3Q9Y5H0 AL355375.2-201ENST00000574825 175 ntBASIC3.69□□□□□ -1.82
PCDHGA3Q9Y5H0 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.69□□□□□ -1.82
PCDHGA3Q9Y5H0 MIR4795-201ENST00000584182 89 ntBASIC3.69□□□□□ -1.82
PCDHGA3Q9Y5H0 MIR4719-201ENST00000585233 84 ntBASIC3.69□□□□□ -1.82
PCDHGA3Q9Y5H0 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.69□□□□□ -1.82
PCDHGA3Q9Y5H0 MIR6134-201ENST00000617606 109 ntBASIC3.69□□□□□ -1.82
PCDHGA3Q9Y5H0 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.69□□□□□ -1.82
PCDHGA3Q9Y5H0 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.69□□□□□ -1.82
PCDHGA3Q9Y5H0 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.69□□□□□ -1.82
PCDHGA3Q9Y5H0 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
PCDHGA3Q9Y5H0 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PCDHGA3Q9Y5H0 AC010680.1-201ENST00000590024 3590 ntBASIC3.68□□□□□ -1.82
PCDHGA3Q9Y5H0 AC138393.1-203ENST00000327086 343 ntBASIC3.68□□□□□ -1.82
PCDHGA3Q9Y5H0 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
PCDHGA3Q9Y5H0 RNU6-72P-201ENST00000384285 79 ntBASIC3.68□□□□□ -1.82
PCDHGA3Q9Y5H0 Y_RNA.482-201ENST00000384377 111 ntBASIC3.68□□□□□ -1.82
PCDHGA3Q9Y5H0 Y_RNA.509-201ENST00000384506 99 ntBASIC3.68□□□□□ -1.82
PCDHGA3Q9Y5H0 MIR34B-201ENST00000385076 84 ntBASIC3.68□□□□□ -1.82
PCDHGA3Q9Y5H0 MIR199A2-201ENST00000385289 110 ntBASIC3.68□□□□□ -1.82
PCDHGA3Q9Y5H0 MIR548F5-201ENST00000408421 86 ntBASIC3.68□□□□□ -1.82
PCDHGA3Q9Y5H0 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.68□□□□□ -1.82
PCDHGA3Q9Y5H0 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.68□□□□□ -1.82
PCDHGA3Q9Y5H0 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.68□□□□□ -1.82
PCDHGA3Q9Y5H0 RPS15AP10-201ENST00000432472 382 ntBASIC3.68□□□□□ -1.82
PCDHGA3Q9Y5H0 AC124916.1-201ENST00000444020 547 ntBASIC3.68□□□□□ -1.82
PCDHGA3Q9Y5H0 AC010099.1-201ENST00000455434 375 ntBASIC3.68□□□□□ -1.82
PCDHGA3Q9Y5H0 RNU6-1037P-201ENST00000459571 107 ntBASIC3.68□□□□□ -1.82
PCDHGA3Q9Y5H0 AC104472.2-201ENST00000469035 601 ntBASIC3.68□□□□□ -1.82
PCDHGA3Q9Y5H0 RPS27AP10-201ENST00000496103 208 ntBASIC3.68□□□□□ -1.82
PCDHGA3Q9Y5H0 RN7SKP24-201ENST00000515888 284 ntBASIC3.68□□□□□ -1.82
PCDHGA3Q9Y5H0 RNU1-54P-201ENST00000517181 120 ntBASIC3.68□□□□□ -1.82
PCDHGA3Q9Y5H0 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.68□□□□□ -1.82
PCDHGA3Q9Y5H0 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.68□□□□□ -1.82
PCDHGA3Q9Y5H0 AP005639.2-201ENST00000527592 928 ntBASIC3.68□□□□□ -1.82
PCDHGA3Q9Y5H0 AP000867.2-201ENST00000532468 320 ntBASIC3.68□□□□□ -1.82
PCDHGA3Q9Y5H0 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.68□□□□□ -1.82
PCDHGA3Q9Y5H0 IMMP1LP2-201ENST00000552954 492 ntBASIC3.68□□□□□ -1.82
PCDHGA3Q9Y5H0 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.68□□□□□ -1.82
PCDHGA3Q9Y5H0 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.68□□□□□ -1.82
PCDHGA3Q9Y5H0 AC012314.7-201ENST00000619693 93 ntBASIC3.68□□□□□ -1.82
PCDHGA3Q9Y5H0 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
PCDHGA3Q9Y5H0 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.68□□□□□ -1.82
PCDHGA3Q9Y5H0 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.68□□□□□ -1.82
PCDHGA3Q9Y5H0 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PCDHGA3Q9Y5H0 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.68□□□□□ -1.82
PCDHGA3Q9Y5H0 UBE3AP2-201ENST00000429033 2259 ntBASIC3.68□□□□□ -1.82
PCDHGA3Q9Y5H0 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.68□□□□□ -1.82
PCDHGA3Q9Y5H0 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PCDHGA3Q9Y5H0 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 RNU6-37P-201ENST00000362692 107 ntBASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 RNU6-11P-201ENST00000364234 107 ntBASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 RNU6-7-201ENST00000364784 107 ntBASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 RNU5E-7P-201ENST00000365290 117 ntBASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 RNU6-8-201ENST00000365467 107 ntBASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 RNU6-25P-201ENST00000383873 107 ntBASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 RNU6-1-201ENST00000383898 107 ntBASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 RNU6-48P-201ENST00000384161 107 ntBASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 RNU6-36P-201ENST00000384172 107 ntBASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 RNU6-4P-201ENST00000384205 107 ntBASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 RNU6-5P-201ENST00000384238 107 ntBASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 Y_RNA.460-201ENST00000384255 102 ntBASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 RNU6-198P-201ENST00000384258 104 ntBASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 RNU6-3P-201ENST00000384314 107 ntBASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 RNU6-16P-201ENST00000384385 107 ntBASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 RNU6-15P-201ENST00000384534 107 ntBASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 RNU6-2-201ENST00000384627 107 ntBASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 RNU6-29P-201ENST00000384637 107 ntBASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 RNU6-9-201ENST00000384776 107 ntBASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 RNU6-33P-201ENST00000384793 107 ntBASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 SNORD56-201ENST00000413522 71 ntBASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 BPY2DP-201ENST00000422208 265 ntBASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms