Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 KATNBL1P6-201ENST00000453433 915 ntBASIC1.4□□□□□ -2.19
HDGFL3Q9Y3E1 USP9YP10-201ENST00000454868 628 ntBASIC1.4□□□□□ -2.19
HDGFL3Q9Y3E1 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.4□□□□□ -2.19
HDGFL3Q9Y3E1 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.4□□□□□ -2.19
HDGFL3Q9Y3E1 AC008837.2-201ENST00000513076 418 ntBASIC1.4□□□□□ -2.19
HDGFL3Q9Y3E1 OR5B19P-201ENST00000531766 928 ntBASIC1.4□□□□□ -2.19
HDGFL3Q9Y3E1 AC022880.1-201ENST00000534017 973 ntBASIC1.4□□□□□ -2.19
HDGFL3Q9Y3E1 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.19
HDGFL3Q9Y3E1 AC022254.1-201ENST00000567857 235 ntBASIC1.4□□□□□ -2.19
HDGFL3Q9Y3E1 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.4□□□□□ -2.19
HDGFL3Q9Y3E1 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.4□□□□□ -2.19
HDGFL3Q9Y3E1 NDUFA8P1-201ENST00000605525 367 ntBASIC1.4□□□□□ -2.19
HDGFL3Q9Y3E1 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
HDGFL3Q9Y3E1 AL512427.1-201ENST00000618593 349 ntBASIC1.4□□□□□ -2.19
HDGFL3Q9Y3E1 AC008121.3-201ENST00000618726 433 ntBASIC1.4□□□□□ -2.19
HDGFL3Q9Y3E1 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.4□□□□□ -2.19
HDGFL3Q9Y3E1 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.4□□□□□ -2.19
HDGFL3Q9Y3E1 U6.99-201ENST00000637524 83 ntBASIC1.4□□□□□ -2.19
HDGFL3Q9Y3E1 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
HDGFL3Q9Y3E1 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.39□□□□□ -2.19
HDGFL3Q9Y3E1 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.39□□□□□ -2.19
HDGFL3Q9Y3E1 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
HDGFL3Q9Y3E1 RNU6-853P-201ENST00000364306 107 ntBASIC1.39□□□□□ -2.19
HDGFL3Q9Y3E1 RNU6-621P-201ENST00000364752 109 ntBASIC1.39□□□□□ -2.19
HDGFL3Q9Y3E1 RNA5SP212-201ENST00000391223 107 ntBASIC1.39□□□□□ -2.19
HDGFL3Q9Y3E1 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC1.39□□□□□ -2.19
HDGFL3Q9Y3E1 AL445669.1-201ENST00000426743 755 ntBASIC1.39□□□□□ -2.19
HDGFL3Q9Y3E1 USP9YP11-201ENST00000427537 717 ntBASIC1.39□□□□□ -2.19
HDGFL3Q9Y3E1 USP9YP24-201ENST00000434374 697 ntBASIC1.39□□□□□ -2.19
HDGFL3Q9Y3E1 RPL23AP76-201ENST00000441860 458 ntBASIC1.39□□□□□ -2.19
HDGFL3Q9Y3E1 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.39□□□□□ -2.19
HDGFL3Q9Y3E1 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.39□□□□□ -2.19
HDGFL3Q9Y3E1 AL137159.1-201ENST00000452808 512 ntBASIC1.39□□□□□ -2.19
HDGFL3Q9Y3E1 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.39□□□□□ -2.19
HDGFL3Q9Y3E1 HMGN2P23-201ENST00000456759 269 ntBASIC1.39□□□□□ -2.19
HDGFL3Q9Y3E1 AMD1P1-201ENST00000457220 922 ntBASIC1.39□□□□□ -2.19
HDGFL3Q9Y3E1 RNU7-59P-201ENST00000459101 61 ntBASIC1.39□□□□□ -2.19
HDGFL3Q9Y3E1 SNORD13-201ENST00000459299 104 ntBASIC1.39□□□□□ -2.19
HDGFL3Q9Y3E1 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.39□□□□□ -2.19
HDGFL3Q9Y3E1 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.39□□□□□ -2.19
HDGFL3Q9Y3E1 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.39□□□□□ -2.19
HDGFL3Q9Y3E1 MIR4293-201ENST00000584305 78 ntBASIC1.39□□□□□ -2.19
HDGFL3Q9Y3E1 VN1R83P-201ENST00000595685 445 ntBASIC1.39□□□□□ -2.19
HDGFL3Q9Y3E1 SNRPGP17-201ENST00000603780 214 ntBASIC1.39□□□□□ -2.19
HDGFL3Q9Y3E1 AC126118.1-201ENST00000607744 628 ntBASIC1.39□□□□□ -2.19
HDGFL3Q9Y3E1 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.39□□□□□ -2.19
HDGFL3Q9Y3E1 AC018926.1-201ENST00000616335 435 ntBASIC1.39□□□□□ -2.19
HDGFL3Q9Y3E1 AL359314.1-201ENST00000616913 261 ntBASIC1.39□□□□□ -2.19
HDGFL3Q9Y3E1 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC1.39□□□□□ -2.19
HDGFL3Q9Y3E1 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.39□□□□□ -2.19
HDGFL3Q9Y3E1 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.39□□□□□ -2.19
HDGFL3Q9Y3E1 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.39□□□□□ -2.19
HDGFL3Q9Y3E1 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.39□□□□□ -2.19
HDGFL3Q9Y3E1 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
HDGFL3Q9Y3E1 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.38□□□□□ -2.19
HDGFL3Q9Y3E1 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
HDGFL3Q9Y3E1 SNORA63.3-201ENST00000362682 132 ntBASIC1.38□□□□□ -2.19
HDGFL3Q9Y3E1 MIR1284-201ENST00000408337 120 ntBASIC1.38□□□□□ -2.19
HDGFL3Q9Y3E1 POLHP1-201ENST00000411806 470 ntBASIC1.38□□□□□ -2.19
HDGFL3Q9Y3E1 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.38□□□□□ -2.19
HDGFL3Q9Y3E1 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.38□□□□□ -2.19
HDGFL3Q9Y3E1 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.38□□□□□ -2.19
HDGFL3Q9Y3E1 EEF1E1P1-201ENST00000446998 430 ntBASIC1.38□□□□□ -2.19
HDGFL3Q9Y3E1 AP000542.1-201ENST00000448473 371 ntBASIC1.38□□□□□ -2.19
HDGFL3Q9Y3E1 AC023194.1-201ENST00000493084 308 ntBASIC1.38□□□□□ -2.19
HDGFL3Q9Y3E1 AC108210.2-201ENST00000503681 201 ntBASIC1.38□□□□□ -2.19
HDGFL3Q9Y3E1 AC009902.1-201ENST00000519351 183 ntBASIC1.38□□□□□ -2.19
HDGFL3Q9Y3E1 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.38□□□□□ -2.19
HDGFL3Q9Y3E1 MIR4285-201ENST00000581001 85 ntBASIC1.38□□□□□ -2.19
HDGFL3Q9Y3E1 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.38□□□□□ -2.19
HDGFL3Q9Y3E1 BNIP3P25-201ENST00000596023 559 ntBASIC1.38□□□□□ -2.19
HDGFL3Q9Y3E1 BNIP3P26-201ENST00000600827 554 ntBASIC1.38□□□□□ -2.19
HDGFL3Q9Y3E1 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.38□□□□□ -2.19
HDGFL3Q9Y3E1 SEPT7P9-203ENST00000604116 343 ntBASIC1.38□□□□□ -2.19
HDGFL3Q9Y3E1 ELOCP5-201ENST00000604924 333 ntBASIC1.38□□□□□ -2.19
HDGFL3Q9Y3E1 AC087045.1-201ENST00000605856 382 ntBASIC1.38□□□□□ -2.19
HDGFL3Q9Y3E1 AL021368.1-201ENST00000607490 540 ntBASIC1.38□□□□□ -2.19
HDGFL3Q9Y3E1 AC112204.3-201ENST00000623822 332 ntBASIC1.38□□□□□ -2.19
HDGFL3Q9Y3E1 AC017037.3-201ENST00000625016 472 ntBASIC1.38□□□□□ -2.19
HDGFL3Q9Y3E1 AC099654.9-201ENST00000637055 678 ntBASIC1.38□□□□□ -2.19
HDGFL3Q9Y3E1 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.38□□□□□ -2.19
HDGFL3Q9Y3E1 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
HDGFL3Q9Y3E1 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
HDGFL3Q9Y3E1 TEX21P-201ENST00000447107 1476 ntBASIC1.37□□□□□ -2.19
HDGFL3Q9Y3E1 WWP1P1-201ENST00000466609 2769 ntBASIC1.37□□□□□ -2.19
HDGFL3Q9Y3E1 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
HDGFL3Q9Y3E1 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.37□□□□□ -2.19
HDGFL3Q9Y3E1 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.37□□□□□ -2.19
HDGFL3Q9Y3E1 RNU6-14P-201ENST00000384630 106 ntBASIC1.37□□□□□ -2.19
HDGFL3Q9Y3E1 MIR518D-201ENST00000385014 87 ntBASIC1.37□□□□□ -2.19
HDGFL3Q9Y3E1 SNORA67.6-201ENST00000391093 99 ntBASIC1.37□□□□□ -2.19
HDGFL3Q9Y3E1 AL133475.1-201ENST00000404414 305 ntBASIC1.37□□□□□ -2.19
HDGFL3Q9Y3E1 MIR1283-2-201ENST00000408621 87 ntBASIC1.37□□□□□ -2.19
HDGFL3Q9Y3E1 AL513185.2-201ENST00000425543 193 ntBASIC1.37□□□□□ -2.19
HDGFL3Q9Y3E1 HMGB1P27-201ENST00000431429 603 ntBASIC1.37□□□□□ -2.19
HDGFL3Q9Y3E1 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.37□□□□□ -2.19
HDGFL3Q9Y3E1 AL360221.1-201ENST00000445989 335 ntBASIC1.37□□□□□ -2.19
HDGFL3Q9Y3E1 MTCO1P27-201ENST00000448269 226 ntBASIC1.37□□□□□ -2.19
HDGFL3Q9Y3E1 PAXBP1P1-201ENST00000449315 447 ntBASIC1.37□□□□□ -2.19
HDGFL3Q9Y3E1 ZNF886P-201ENST00000450781 723 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms