Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.72□□□□□ -1.65
CDK11AQ9UQ88 AL138889.2-201ENST00000603883 242 ntBASIC4.72□□□□□ -1.65
CDK11AQ9UQ88 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CDK11AQ9UQ88 RNU1-75P-201ENST00000347264 129 ntBASIC4.71□□□□□ -1.66
CDK11AQ9UQ88 Y_RNA.157-201ENST00000363638 102 ntBASIC4.71□□□□□ -1.66
CDK11AQ9UQ88 RNU6-301P-201ENST00000384277 107 ntBASIC4.71□□□□□ -1.66
CDK11AQ9UQ88 MT-TL1-201ENST00000386347 75 ntBASIC4.71□□□□□ -1.66
CDK11AQ9UQ88 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.71□□□□□ -1.66
CDK11AQ9UQ88 AC138393.2-201ENST00000414742 246 ntBASIC4.71□□□□□ -1.66
CDK11AQ9UQ88 AC080125.1-201ENST00000414888 684 ntBASIC4.71□□□□□ -1.66
CDK11AQ9UQ88 AC091885.1-201ENST00000506658 268 ntBASIC4.71□□□□□ -1.66
CDK11AQ9UQ88 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CDK11AQ9UQ88 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC4.71□□□□□ -1.66
CDK11AQ9UQ88 AC098591.2-201ENST00000510152 315 ntBASIC4.71□□□□□ -1.66
CDK11AQ9UQ88 AC025465.4-201ENST00000513422 638 ntBASIC4.71□□□□□ -1.66
CDK11AQ9UQ88 RNU6-123P-201ENST00000516163 102 ntBASIC4.71□□□□□ -1.66
CDK11AQ9UQ88 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.71□□□□□ -1.66
CDK11AQ9UQ88 RNU6-685P-201ENST00000517088 95 ntBASIC4.71□□□□□ -1.66
CDK11AQ9UQ88 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.71□□□□□ -1.66
CDK11AQ9UQ88 AC107016.2-201ENST00000547968 190 ntBASIC4.71□□□□□ -1.66
CDK11AQ9UQ88 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.71□□□□□ -1.66
CDK11AQ9UQ88 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.71□□□□□ -1.66
CDK11AQ9UQ88 AC008521.1-201ENST00000587471 187 ntBASIC4.71□□□□□ -1.66
CDK11AQ9UQ88 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.71□□□□□ -1.66
CDK11AQ9UQ88 AC004852.3-201ENST00000614131 326 ntBASIC4.71□□□□□ -1.66
CDK11AQ9UQ88 AC007496.3-201ENST00000624987 3443 ntBASIC4.71□□□□□ -1.66
CDK11AQ9UQ88 OR4G1P-203ENST00000641984 1631 ntBASIC4.71□□□□□ -1.66
CDK11AQ9UQ88 CPD-202ENST00000543464 4007 ntTSL 2 BASIC4.71□□□□□ -1.66
CDK11AQ9UQ88 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC4.71□□□□□ -1.66
CDK11AQ9UQ88 ASNSP3-201ENST00000451989 1306 ntBASIC4.71□□□□□ -1.66
CDK11AQ9UQ88 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDK11AQ9UQ88 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDK11AQ9UQ88 MIR449A-201ENST00000362113 91 ntBASIC4.7□□□□□ -1.66
CDK11AQ9UQ88 RNU6-288P-201ENST00000363690 104 ntBASIC4.7□□□□□ -1.66
CDK11AQ9UQ88 RNU6-270P-201ENST00000364131 105 ntBASIC4.7□□□□□ -1.66
CDK11AQ9UQ88 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.7□□□□□ -1.66
CDK11AQ9UQ88 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.7□□□□□ -1.66
CDK11AQ9UQ88 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.7□□□□□ -1.66
CDK11AQ9UQ88 AL591212.2-201ENST00000433923 257 ntBASIC4.7□□□□□ -1.66
CDK11AQ9UQ88 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.7□□□□□ -1.66
CDK11AQ9UQ88 AL118520.1-201ENST00000450770 291 ntBASIC4.7□□□□□ -1.66
CDK11AQ9UQ88 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC4.7□□□□□ -1.66
CDK11AQ9UQ88 RPS26P21-201ENST00000475397 348 ntBASIC4.7□□□□□ -1.66
CDK11AQ9UQ88 AC018710.1-201ENST00000506509 158 ntBASIC4.7□□□□□ -1.66
CDK11AQ9UQ88 AC117522.3-201ENST00000507974 584 ntBASIC4.7□□□□□ -1.66
CDK11AQ9UQ88 SUB1P1-201ENST00000524415 382 ntBASIC4.7□□□□□ -1.66
CDK11AQ9UQ88 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.7□□□□□ -1.66
CDK11AQ9UQ88 AL670379.4-201ENST00000605279 254 ntBASIC4.7□□□□□ -1.66
CDK11AQ9UQ88 AC107294.1-201ENST00000609524 467 ntBASIC4.7□□□□□ -1.66
CDK11AQ9UQ88 RMST_3.1-201ENST00000611651 109 ntBASIC4.7□□□□□ -1.66
CDK11AQ9UQ88 AC010338.1-201ENST00000621823 717 ntBASIC4.7□□□□□ -1.66
CDK11AQ9UQ88 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.7□□□□□ -1.66
CDK11AQ9UQ88 AC096644.4-201ENST00000563417 2912 ntBASIC4.7□□□□□ -1.66
CDK11AQ9UQ88 AP003122.5-201ENST00000527668 3766 ntBASIC4.7□□□□□ -1.66
CDK11AQ9UQ88 AC099654.7-201ENST00000635788 2127 ntBASIC4.7□□□□□ -1.66
CDK11AQ9UQ88 AL354685.2-201ENST00000448218 1447 ntBASIC4.7□□□□□ -1.66
CDK11AQ9UQ88 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC4.7□□□□□ -1.66
CDK11AQ9UQ88 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDK11AQ9UQ88 AC073325.2-201ENST00000339545 159 ntBASIC4.69□□□□□ -1.66
CDK11AQ9UQ88 RNU6-867P-201ENST00000364956 107 ntBASIC4.69□□□□□ -1.66
CDK11AQ9UQ88 RNA5SP111-201ENST00000411386 101 ntBASIC4.69□□□□□ -1.66
CDK11AQ9UQ88 RPL30P16-201ENST00000419341 429 ntBASIC4.69□□□□□ -1.66
CDK11AQ9UQ88 ATG3P1-201ENST00000419507 911 ntBASIC4.69□□□□□ -1.66
CDK11AQ9UQ88 AL645937.1-202ENST00000421799 937 ntBASIC4.69□□□□□ -1.66
CDK11AQ9UQ88 AC092047.1-201ENST00000424997 240 ntBASIC4.69□□□□□ -1.66
CDK11AQ9UQ88 PIGFP3-201ENST00000441918 722 ntBASIC4.69□□□□□ -1.66
CDK11AQ9UQ88 RPS24P13-201ENST00000442520 397 ntBASIC4.69□□□□□ -1.66
CDK11AQ9UQ88 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.69□□□□□ -1.66
CDK11AQ9UQ88 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.69□□□□□ -1.66
CDK11AQ9UQ88 RPL39P36-201ENST00000490784 156 ntBASIC4.69□□□□□ -1.66
CDK11AQ9UQ88 RBBP4P6-201ENST00000508098 202 ntBASIC4.69□□□□□ -1.66
CDK11AQ9UQ88 HIGD1AP13-201ENST00000509878 289 ntBASIC4.69□□□□□ -1.66
CDK11AQ9UQ88 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.69□□□□□ -1.66
CDK11AQ9UQ88 BNIP3P6-201ENST00000549284 499 ntBASIC4.69□□□□□ -1.66
CDK11AQ9UQ88 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.69□□□□□ -1.66
CDK11AQ9UQ88 AL138976.2-201ENST00000563989 694 ntBASIC4.69□□□□□ -1.66
CDK11AQ9UQ88 AC010525.2-201ENST00000590920 195 ntBASIC4.69□□□□□ -1.66
CDK11AQ9UQ88 BNIP3P10-201ENST00000605360 577 ntBASIC4.69□□□□□ -1.66
CDK11AQ9UQ88 AC004832.5-201ENST00000608677 401 ntBASIC4.69□□□□□ -1.66
CDK11AQ9UQ88 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.69□□□□□ -1.66
CDK11AQ9UQ88 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.69□□□□□ -1.66
CDK11AQ9UQ88 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDK11AQ9UQ88 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CDK11AQ9UQ88 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDK11AQ9UQ88 AC008669.1-201ENST00000565823 2178 ntBASIC4.68□□□□□ -1.66
CDK11AQ9UQ88 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CDK11AQ9UQ88 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.68□□□□□ -1.66
CDK11AQ9UQ88 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CDK11AQ9UQ88 RNA5SP126-201ENST00000365092 109 ntBASIC4.68□□□□□ -1.66
CDK11AQ9UQ88 RNU6-550P-201ENST00000391057 101 ntBASIC4.68□□□□□ -1.66
CDK11AQ9UQ88 AL356776.1-201ENST00000406574 447 ntBASIC4.68□□□□□ -1.66
CDK11AQ9UQ88 RPS12P24-201ENST00000412619 387 ntBASIC4.68□□□□□ -1.66
CDK11AQ9UQ88 ARL5AP1-201ENST00000418991 388 ntBASIC4.68□□□□□ -1.66
CDK11AQ9UQ88 AC007919.1-201ENST00000429380 217 ntBASIC4.68□□□□□ -1.66
CDK11AQ9UQ88 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.68□□□□□ -1.66
CDK11AQ9UQ88 RNU4ATAC3P-201ENST00000516699 126 ntBASIC4.68□□□□□ -1.66
CDK11AQ9UQ88 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.68□□□□□ -1.66
CDK11AQ9UQ88 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.68□□□□□ -1.66
CDK11AQ9UQ88 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.68□□□□□ -1.66
CDK11AQ9UQ88 AC022893.3-201ENST00000607665 437 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms