Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 RN7SKP258-201ENST00000517151 304 ntBASIC2.73□□□□□ -1.97
CLIP2Q9UDT6 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.73□□□□□ -1.97
CLIP2Q9UDT6 AC022634.1-201ENST00000520765 532 ntBASIC2.73□□□□□ -1.97
CLIP2Q9UDT6 PRELID2P1-201ENST00000552837 301 ntBASIC2.73□□□□□ -1.97
CLIP2Q9UDT6 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.73□□□□□ -1.97
CLIP2Q9UDT6 AC025281.1-201ENST00000567026 265 ntBASIC2.73□□□□□ -1.97
CLIP2Q9UDT6 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.73□□□□□ -1.97
CLIP2Q9UDT6 AC091805.2-201ENST00000603848 235 ntBASIC2.73□□□□□ -1.97
CLIP2Q9UDT6 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.73□□□□□ -1.97
CLIP2Q9UDT6 AF250324.2-201ENST00000608299 610 ntBASIC2.73□□□□□ -1.97
CLIP2Q9UDT6 MIR6895-201ENST00000613497 78 ntBASIC2.73□□□□□ -1.97
CLIP2Q9UDT6 MIR203B-201ENST00000636080 86 ntBASIC2.73□□□□□ -1.97
CLIP2Q9UDT6 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.73□□□□□ -1.97
CLIP2Q9UDT6 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CLIP2Q9UDT6 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CLIP2Q9UDT6 AL137003.2-201ENST00000606924 2538 ntBASIC2.73□□□□□ -1.97
CLIP2Q9UDT6 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.73□□□□□ -1.97
CLIP2Q9UDT6 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
CLIP2Q9UDT6 MTND5P6-201ENST00000422338 1798 ntBASIC2.72□□□□□ -1.97
CLIP2Q9UDT6 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CLIP2Q9UDT6 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
CLIP2Q9UDT6 AL139276.1-201ENST00000311910 1001 ntBASIC2.72□□□□□ -1.97
CLIP2Q9UDT6 RNU6-1284P-201ENST00000363701 100 ntBASIC2.72□□□□□ -1.97
CLIP2Q9UDT6 RNU5A-8P-201ENST00000364102 114 ntBASIC2.72□□□□□ -1.97
CLIP2Q9UDT6 Y_RNA.248-201ENST00000364501 109 ntBASIC2.72□□□□□ -1.97
CLIP2Q9UDT6 MIR144-201ENST00000384886 86 ntBASIC2.72□□□□□ -1.97
CLIP2Q9UDT6 MIR1261-201ENST00000408659 82 ntBASIC2.72□□□□□ -1.97
CLIP2Q9UDT6 RNA5SP425-201ENST00000410336 112 ntBASIC2.72□□□□□ -1.97
CLIP2Q9UDT6 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.72□□□□□ -1.97
CLIP2Q9UDT6 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.72□□□□□ -1.97
CLIP2Q9UDT6 RPS15AP28-201ENST00000435088 386 ntBASIC2.72□□□□□ -1.97
CLIP2Q9UDT6 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.72□□□□□ -1.97
CLIP2Q9UDT6 AL022238.1-201ENST00000442557 355 ntBASIC2.72□□□□□ -1.97
CLIP2Q9UDT6 COX6CP12-201ENST00000446748 202 ntBASIC2.72□□□□□ -1.97
CLIP2Q9UDT6 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.72□□□□□ -1.97
CLIP2Q9UDT6 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.72□□□□□ -1.97
CLIP2Q9UDT6 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.72□□□□□ -1.97
CLIP2Q9UDT6 RPL12P25-201ENST00000455592 494 ntBASIC2.72□□□□□ -1.97
CLIP2Q9UDT6 RPL23AP49-201ENST00000492925 468 ntBASIC2.72□□□□□ -1.97
CLIP2Q9UDT6 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CLIP2Q9UDT6 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.72□□□□□ -1.97
CLIP2Q9UDT6 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.72□□□□□ -1.97
CLIP2Q9UDT6 AP000907.2-201ENST00000530827 353 ntBASIC2.72□□□□□ -1.97
CLIP2Q9UDT6 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.72□□□□□ -1.97
CLIP2Q9UDT6 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.72□□□□□ -1.97
CLIP2Q9UDT6 AC078814.3-201ENST00000553036 491 ntBASIC2.72□□□□□ -1.97
CLIP2Q9UDT6 AL359212.1-201ENST00000556608 614 ntBASIC2.72□□□□□ -1.97
CLIP2Q9UDT6 AP001004.1-201ENST00000582468 324 ntBASIC2.72□□□□□ -1.97
CLIP2Q9UDT6 MIR4307-201ENST00000582802 84 ntBASIC2.72□□□□□ -1.97
CLIP2Q9UDT6 MIR4293-201ENST00000584305 78 ntBASIC2.72□□□□□ -1.97
CLIP2Q9UDT6 HMGN2P15-201ENST00000585707 270 ntBASIC2.72□□□□□ -1.97
CLIP2Q9UDT6 AC012065.4-201ENST00000602445 679 ntBASIC2.72□□□□□ -1.97
CLIP2Q9UDT6 AC007684.1-201ENST00000609671 477 ntBASIC2.72□□□□□ -1.97
CLIP2Q9UDT6 AL355472.4-201ENST00000610233 626 ntBASIC2.72□□□□□ -1.97
CLIP2Q9UDT6 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.72□□□□□ -1.97
CLIP2Q9UDT6 AC009159.1-201ENST00000618386 642 ntBASIC2.72□□□□□ -1.97
CLIP2Q9UDT6 AC022140.2-201ENST00000623500 188 ntBASIC2.72□□□□□ -1.97
CLIP2Q9UDT6 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CLIP2Q9UDT6 AC005336.3-201ENST00000623833 2679 ntBASIC2.72□□□□□ -1.97
CLIP2Q9UDT6 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
CLIP2Q9UDT6 Y_RNA.6-201ENST00000362350 114 ntBASIC2.71□□□□□ -1.98
CLIP2Q9UDT6 RNU1-91P-201ENST00000364746 163 ntBASIC2.71□□□□□ -1.98
CLIP2Q9UDT6 RN7SKP226-201ENST00000364912 300 ntBASIC2.71□□□□□ -1.98
CLIP2Q9UDT6 RNU5E-4P-201ENST00000364931 120 ntBASIC2.71□□□□□ -1.98
CLIP2Q9UDT6 RNU1-73P-201ENST00000383971 164 ntBASIC2.71□□□□□ -1.98
CLIP2Q9UDT6 Y_RNA.554-201ENST00000384672 102 ntBASIC2.71□□□□□ -1.98
CLIP2Q9UDT6 RNY3P10-201ENST00000384764 102 ntBASIC2.71□□□□□ -1.98
CLIP2Q9UDT6 BTF3P7-201ENST00000407097 488 ntBASIC2.71□□□□□ -1.98
CLIP2Q9UDT6 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.71□□□□□ -1.98
CLIP2Q9UDT6 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.71□□□□□ -1.98
CLIP2Q9UDT6 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.71□□□□□ -1.98
CLIP2Q9UDT6 RPL23AP39-201ENST00000415533 405 ntBASIC2.71□□□□□ -1.98
CLIP2Q9UDT6 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.71□□□□□ -1.98
CLIP2Q9UDT6 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.71□□□□□ -1.98
CLIP2Q9UDT6 ELOCP14-201ENST00000428070 331 ntBASIC2.71□□□□□ -1.98
CLIP2Q9UDT6 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.71□□□□□ -1.98
CLIP2Q9UDT6 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.71□□□□□ -1.98
CLIP2Q9UDT6 ELOCP7-201ENST00000439968 331 ntBASIC2.71□□□□□ -1.98
CLIP2Q9UDT6 MTATP6P30-201ENST00000443540 664 ntBASIC2.71□□□□□ -1.98
CLIP2Q9UDT6 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.71□□□□□ -1.98
CLIP2Q9UDT6 AC108059.3-201ENST00000456388 214 ntBASIC2.71□□□□□ -1.98
CLIP2Q9UDT6 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.71□□□□□ -1.98
CLIP2Q9UDT6 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CLIP2Q9UDT6 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CLIP2Q9UDT6 RNU6-718P-201ENST00000516166 105 ntBASIC2.71□□□□□ -1.98
CLIP2Q9UDT6 RNU6-64P-201ENST00000517119 105 ntBASIC2.71□□□□□ -1.98
CLIP2Q9UDT6 AP003392.2-201ENST00000527269 208 ntBASIC2.71□□□□□ -1.98
CLIP2Q9UDT6 DEFB108A-201ENST00000530110 222 ntBASIC2.71□□□□□ -1.98
CLIP2Q9UDT6 MIR3117-201ENST00000584034 78 ntBASIC2.71□□□□□ -1.98
CLIP2Q9UDT6 AP000403.1-201ENST00000603349 851 ntBASIC2.71□□□□□ -1.98
CLIP2Q9UDT6 AC006566.1-201ENST00000608943 513 ntBASIC2.71□□□□□ -1.98
CLIP2Q9UDT6 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.71□□□□□ -1.98
CLIP2Q9UDT6 MTND4P16-201ENST00000466108 1367 ntBASIC2.71□□□□□ -1.98
CLIP2Q9UDT6 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
CLIP2Q9UDT6 RNU6-884P-201ENST00000363889 107 ntBASIC2.7□□□□□ -1.98
CLIP2Q9UDT6 RNU6-694P-201ENST00000364071 147 ntBASIC2.7□□□□□ -1.98
CLIP2Q9UDT6 Y_RNA.245-201ENST00000364493 95 ntBASIC2.7□□□□□ -1.98
CLIP2Q9UDT6 RNU6-297P-201ENST00000384636 107 ntBASIC2.7□□□□□ -1.98
CLIP2Q9UDT6 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.7□□□□□ -1.98
CLIP2Q9UDT6 MTCYBP36-201ENST00000404146 440 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms